Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010397 |
Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169629563
Identifier: 169629563
GI number: 169629563
Start: 2528687
End: 2530168
Strand: Reverse
Name: 169629563
Synonym: MAB_2477c
Alternate gene names: NA
Gene position: 2530168-2528687 (Counterclockwise)
Preceding gene: 169629564
Following gene: 169629561
Centisome position: 49.93
GC content: 59.92
Gene sequence:
>1482_bases ATGACAACGCAGTTTGATGCCGTCATCGTCGGGGCCGGTTTCGGTGGAATGGGCGCGGCAATTCAGCTCAAGGAGCTGGG TCTGACAAATCTCGCGATCTTGGACCGCGAGGATGACCTCGGCGGCACGTGGCACGTCAACCACTATCCCGGTCTGGCAG TCGACATCCCGTCGGCGACGTACTCATACTCATTCGAGCCCAATCCGTACTGGTCGCGCCTGTTCGCACCGGGCTCCGAA TTGAAGCAGTACGCCAGTCACGTGGCCGACAAACATGACCTGCGCAAGTACATGCGGTTCAACACTCCGGTGTCCGGCGC CCGGTGGGATGAGGAACATCAGCACTGGGTTGTCGCTACCGAATCCGGCGACACCGTCACCGGCAAGTACCTGCTCACCG CCACCGGATACCTTTCCCAGCCGAAGATGCCCGATATCGAGGGCATCGAATCCTTCGCGGGCAAGGTCATCCACACCACC AAGTGGGACAACTCCTATCGGGCCGCGGGCCACAGGATCGGCCTGATCGGTACTGGCGCCACCGCCGTTCAACTCATCCC CGAGTTGGCCAAGGACGCACAACACCTCACGGTGTATCAGCGCACCCCGATCTGGGTGGTGCCCAAGGCCGACGCGAAGG TCCCTGGCGTCGTCAAAAAACTCTTCGCAAAGGTGCCACGGACCCAGAAGATCGCTCGCACAGTGGGTTCGGCAATCCTT GAAGTGATCATGGTTGGCGGCGTATTACATTTCCGCCAGTTCCGGCAGGCCAACCATGGGGCTTCGTTACTTGCCAAGGC GCATCTGTTCGCACAGGTACGCGATCGGGAGCTACGCCGCAAGCTGACTCCCGATTACGACTTCGGCTGCAAACGGCCCA CCTTCTCGAACACGTATTTCCGCGCGTTCACCAAGAAGAATGTCAGCCTCGAGACGGCGTCGATCGCGCGCATCGAGGCC GACGGCATCGTGACCGCCGACGGCCGCAAGACGGTGATCGACACCCTGGTGCTGGCCACCGGCTTCAATCTGTGGGAATC AACCTTCCCTGCTTTCGAAGTTATCGGACGCGAAGACTACAACCTCGGAAAATTTTGGCGCGACAACAGATTCCAGGCCT TCGAAGGCATTGCGGTGCCCAAGTTCCCGAATCTTCTGACGCTCAATGGGCCCTACTCGTACAGCGGCTTGTCGTACTTC GACACCATCGAGTCGCAGATGCGGCATATCAAGCGGCTATTCGCAGAGATGGCACGGACCGGTACGGAAGTCTTCGAGGT GACCGACGAGGCCAATACCGAATTCCTGGACCGTATGACCCGCAACCTGGACAACTCGGTGTTCTACCTGGGCAGCTGCC AGACGTCCAGGAGCTACTACTTCAATCAGCACGGCGAAGCCGCGCTTCTGCGCCCAACCTCAACGGCCAGCGCGTACAAG GAGCAGGAGTCCTTCCCGCTGGAGGCCTATCAGTTGGCCTAG
Upstream 100 bases:
>100_bases CACTTCGGCGAATGAGGAAGTGCTCACCCGATTGGGGACCGAGGTAACAGGTATCTAGACGGGCCGACCATTTACCAGGG AGCGCGGCTAGCATTGGGAC
Downstream 100 bases:
>100_bases CCCGTCGCACCCGCCCTCGTCTCTAAAACACAGTCGCCGCATACCGCAGTGCGATCCTCGGCGAGTCGGTAGATGAGGCA GCAGCTGCGTCGCCGAAAGT
Product: monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MTTQFDAVIVGAGFGGMGAAIQLKELGLTNLAILDREDDLGGTWHVNHYPGLAVDIPSATYSYSFEPNPYWSRLFAPGSE LKQYASHVADKHDLRKYMRFNTPVSGARWDEEHQHWVVATESGDTVTGKYLLTATGYLSQPKMPDIEGIESFAGKVIHTT KWDNSYRAAGHRIGLIGTGATAVQLIPELAKDAQHLTVYQRTPIWVVPKADAKVPGVVKKLFAKVPRTQKIARTVGSAIL EVIMVGGVLHFRQFRQANHGASLLAKAHLFAQVRDRELRRKLTPDYDFGCKRPTFSNTYFRAFTKKNVSLETASIARIEA DGIVTADGRKTVIDTLVLATGFNLWESTFPAFEVIGREDYNLGKFWRDNRFQAFEGIAVPKFPNLLTLNGPYSYSGLSYF DTIESQMRHIKRLFAEMARTGTEVFEVTDEANTEFLDRMTRNLDNSVFYLGSCQTSRSYYFNQHGEAALLRPTSTASAYK EQESFPLEAYQLA
Sequences:
>Translated_493_residues MTTQFDAVIVGAGFGGMGAAIQLKELGLTNLAILDREDDLGGTWHVNHYPGLAVDIPSATYSYSFEPNPYWSRLFAPGSE LKQYASHVADKHDLRKYMRFNTPVSGARWDEEHQHWVVATESGDTVTGKYLLTATGYLSQPKMPDIEGIESFAGKVIHTT KWDNSYRAAGHRIGLIGTGATAVQLIPELAKDAQHLTVYQRTPIWVVPKADAKVPGVVKKLFAKVPRTQKIARTVGSAIL EVIMVGGVLHFRQFRQANHGASLLAKAHLFAQVRDRELRRKLTPDYDFGCKRPTFSNTYFRAFTKKNVSLETASIARIEA DGIVTADGRKTVIDTLVLATGFNLWESTFPAFEVIGREDYNLGKFWRDNRFQAFEGIAVPKFPNLLTLNGPYSYSGLSYF DTIESQMRHIKRLFAEMARTGTEVFEVTDEANTEFLDRMTRNLDNSVFYLGSCQTSRSYYFNQHGEAALLRPTSTASAYK EQESFPLEAYQLA >Mature_492_residues TTQFDAVIVGAGFGGMGAAIQLKELGLTNLAILDREDDLGGTWHVNHYPGLAVDIPSATYSYSFEPNPYWSRLFAPGSEL KQYASHVADKHDLRKYMRFNTPVSGARWDEEHQHWVVATESGDTVTGKYLLTATGYLSQPKMPDIEGIESFAGKVIHTTK WDNSYRAAGHRIGLIGTGATAVQLIPELAKDAQHLTVYQRTPIWVVPKADAKVPGVVKKLFAKVPRTQKIARTVGSAILE VIMVGGVLHFRQFRQANHGASLLAKAHLFAQVRDRELRRKLTPDYDFGCKRPTFSNTYFRAFTKKNVSLETASIARIEAD GIVTADGRKTVIDTLVLATGFNLWESTFPAFEVIGREDYNLGKFWRDNRFQAFEGIAVPKFPNLLTLNGPYSYSGLSYFD TIESQMRHIKRLFAEMARTGTEVFEVTDEANTEFLDRMTRNLDNSVFYLGSCQTSRSYYFNQHGEAALLRPTSTASAYKE QESFPLEAYQLA
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-binding monooxygenase family [H]
Homologues:
Organism=Caenorhabditis elegans, GI25145785, Length=349, Percent_Identity=22.0630372492837, Blast_Score=94, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020946 [H]
Pfam domain/function: PF00743 FMO-like [H]
EC number: NA
Molecular weight: Translated: 55218; Mature: 55087
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQFDAVIVGAGFGGMGAAIQLKELGLTNLAILDREDDLGGTWHVNHYPGLAVDIPSAT CCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEECCCCCEEEECCCCC YSYSFEPNPYWSRLFAPGSELKQYASHVADKHDLRKYMRFNTPVSGARWDEEHQHWVVAT EEECCCCCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE ESGDTVTGKYLLTATGYLSQPKMPDIEGIESFAGKVIHTTKWDNSYRAAGHRIGLIGTGA CCCCEEECEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEECCCCCHHCCCCEEEEEECCH TAVQLIPELAKDAQHLTVYQRTPIWVVPKADAKVPGVVKKLFAKVPRTQKIARTVGSAIL HHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH EVIMVGGVLHFRQFRQANHGASLLAKAHLFAQVRDRELRRKLTPDYDFGCKRPTFSNTYF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHE RAFTKKNVSLETASIARIEADGIVTADGRKTVIDTLVLATGFNLWESTFPAFEVIGREDY EEECCCCCEEEEEEEEEEECCCEEECCCCHHHHHHHHHHHCCHHHHHCCCHHHHHCCCCC NLGKFWRDNRFQAFEGIAVPKFPNLLTLNGPYSYSGLSYFDTIESQMRHIKRLFAEMART CCCCHHCCCCCHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GTEVFEVTDEANTEFLDRMTRNLDNSVFYLGSCQTSRSYYFNQHGEAALLRPTSTASAYK CCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCEEEECCCCHHHHHH EQESFPLEAYQLA HHCCCCCCCEECC >Mature Secondary Structure TTQFDAVIVGAGFGGMGAAIQLKELGLTNLAILDREDDLGGTWHVNHYPGLAVDIPSAT CCCEEEEEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEECCCCCEEEECCCCC YSYSFEPNPYWSRLFAPGSELKQYASHVADKHDLRKYMRFNTPVSGARWDEEHQHWVVAT EEECCCCCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE ESGDTVTGKYLLTATGYLSQPKMPDIEGIESFAGKVIHTTKWDNSYRAAGHRIGLIGTGA CCCCEEECEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEECCCCCHHCCCCEEEEEECCH TAVQLIPELAKDAQHLTVYQRTPIWVVPKADAKVPGVVKKLFAKVPRTQKIARTVGSAIL HHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH EVIMVGGVLHFRQFRQANHGASLLAKAHLFAQVRDRELRRKLTPDYDFGCKRPTFSNTYF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHE RAFTKKNVSLETASIARIEADGIVTADGRKTVIDTLVLATGFNLWESTFPAFEVIGREDY EEECCCCCEEEEEEEEEEECCCEEECCCCHHHHHHHHHHHCCHHHHHCCCHHHHHCCCCC NLGKFWRDNRFQAFEGIAVPKFPNLLTLNGPYSYSGLSYFDTIESQMRHIKRLFAEMART CCCCHHCCCCCHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GTEVFEVTDEANTEFLDRMTRNLDNSVFYLGSCQTSRSYYFNQHGEAALLRPTSTASAYK CCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCEEEECCCCHHHHHH EQESFPLEAYQLA HHCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]