Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169629289
Identifier: 169629289
GI number: 169629289
Start: 2219902
End: 2220294
Strand: Direct
Name: 169629289
Synonym: MAB_2203
Alternate gene names: NA
Gene position: 2219902-2220294 (Clockwise)
Preceding gene: 169629288
Following gene: 169629290
Centisome position: 43.81
GC content: 67.43
Gene sequence:
>393_bases ATGGGTGCGAACCTCACGGTGCCGACGTTCGACGACATCTGCGCCGCCAAATATGTCTTGTTGACCACCTACACCAAAGA CGGCCGGGCCAAGCCCGCCGCGGTGTGGGCGGCCCCGGAGAACGGCGAGCTGCTGGTGTGGACCGAGACCAACTCGTGGA AGGTGCGGCGCATCCGCAACACCCCGCGCGTGACGCTGGCCGTCTGTGATGTGCGGGGCAACGTTCGTAGCGGTGAGATC GAAGGAACTGCGAGGGTGCTGGACGCTGACGGCACCGAACGGGCTCGCGCGGCCATCACCCGCAAGTACGGCGTACTGGG CTGGCTGCTGGTGAAGGCGAGCATCCTGCGTCGCGGGCGCAGCGGCACCATCGGGCTGGCCATCACCGGCTGA
Upstream 100 bases:
>100_bases ATGGTGTCCGCCTTCAACTCACGTCGCGTGGGCGTCAGGGTCGGAATTTCGGTGACGCTGGGCGCGCCGGAAGGTCACTG ACCTCCCTACGATGGTCGGC
Downstream 100 bases:
>100_bases CCCGGGAACCTGGCGGCCGGCCGGCTCGTTGACGCGATATGTGGCCAGGCCTGTTTCTGCTGTACGTGATTGTCGAGGTG TCCGCCCTCGTGGCGTTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MGANLTVPTFDDICAAKYVLLTTYTKDGRAKPAAVWAAPENGELLVWTETNSWKVRRIRNTPRVTLAVCDVRGNVRSGEI EGTARVLDADGTERARAAITRKYGVLGWLLVKASILRRGRSGTIGLAITG
Sequences:
>Translated_130_residues MGANLTVPTFDDICAAKYVLLTTYTKDGRAKPAAVWAAPENGELLVWTETNSWKVRRIRNTPRVTLAVCDVRGNVRSGEI EGTARVLDADGTERARAAITRKYGVLGWLLVKASILRRGRSGTIGLAITG >Mature_129_residues GANLTVPTFDDICAAKYVLLTTYTKDGRAKPAAVWAAPENGELLVWTETNSWKVRRIRNTPRVTLAVCDVRGNVRSGEIE GTARVLDADGTERARAAITRKYGVLGWLLVKASILRRGRSGTIGLAITG
Specific function: Unknown
COG id: COG3576
COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14099; Mature: 13968
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGANLTVPTFDDICAAKYVLLTTYTKDGRAKPAAVWAAPENGELLVWTETNSWKVRRIRN CCCCCCCCCCHHHHHCEEEEEEEECCCCCCCCEEEEECCCCCCEEEEEECCCEEEEEECC TPRVTLAVCDVRGNVRSGEIEGTARVLDADGTERARAAITRKYGVLGWLLVKASILRRGR CCEEEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC SGTIGLAITG CCEEEEEEEC >Mature Secondary Structure GANLTVPTFDDICAAKYVLLTTYTKDGRAKPAAVWAAPENGELLVWTETNSWKVRRIRN CCCCCCCCCHHHHHCEEEEEEEECCCCCCCCEEEEECCCCCCEEEEEECCCEEEEEECC TPRVTLAVCDVRGNVRSGEIEGTARVLDADGTERARAAITRKYGVLGWLLVKASILRRGR CCEEEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC SGTIGLAITG CCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA