Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169629288
Identifier: 169629288
GI number: 169629288
Start: 2219478
End: 2219882
Strand: Direct
Name: 169629288
Synonym: MAB_2202
Alternate gene names: NA
Gene position: 2219478-2219882 (Clockwise)
Preceding gene: 169629287
Following gene: 169629289
Centisome position: 43.8
GC content: 65.19
Gene sequence:
>405_bases ATGGCCCGGGACAAAGGCTTAGACATCGCCACGGTTGCGATGGGCCGTTACATCTTGTTGACCACCTTCACCAAGGACGG GATACCGAAGCCCACCCCCATGTGGTTCGTCACCGAGGGCGACGAGCTACTGATGACCACGGGGGGCGACTCCTGGAAGA TCAAGCGCATCCGGCGGAGCCCCAAGGTGACGGTGGCCGTATGCACCCAACGCGGACGGGTGATCAGCCCGACGGCCGAG GCCACCGCCGCCGTGGTCGAGGACCCGGCCTCGGTCGAACGCATCCGTGCCACGGTGATCAAGCGTTACGGGTTGTTCGG CCGGATGGTGTCCGCCTTCAACTCACGTCGCGTGGGCGTCAGGGTCGGAATTTCGGTGACGCTGGGCGCGCCGGAAGGTC ACTGA
Upstream 100 bases:
>100_bases CAGTCGTGGATTGTGGGAGAAGCCCGATCAGCAAGTTTTGGATGATTTGCGAAATGTCTTCCTCGAAACCGAGGGCGAGC TGGAGTCGTAGCATCGGGGG
Downstream 100 bases:
>100_bases CCTCCCTACGATGGTCGGCATGGGTGCGAACCTCACGGTGCCGACGTTCGACGACATCTGCGCCGCCAAATATGTCTTGT TGACCACCTACACCAAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MARDKGLDIATVAMGRYILLTTFTKDGIPKPTPMWFVTEGDELLMTTGGDSWKIKRIRRSPKVTVAVCTQRGRVISPTAE ATAAVVEDPASVERIRATVIKRYGLFGRMVSAFNSRRVGVRVGISVTLGAPEGH
Sequences:
>Translated_134_residues MARDKGLDIATVAMGRYILLTTFTKDGIPKPTPMWFVTEGDELLMTTGGDSWKIKRIRRSPKVTVAVCTQRGRVISPTAE ATAAVVEDPASVERIRATVIKRYGLFGRMVSAFNSRRVGVRVGISVTLGAPEGH >Mature_133_residues ARDKGLDIATVAMGRYILLTTFTKDGIPKPTPMWFVTEGDELLMTTGGDSWKIKRIRRSPKVTVAVCTQRGRVISPTAEA TAAVVEDPASVERIRATVIKRYGLFGRMVSAFNSRRVGVRVGISVTLGAPEGH
Specific function: Unknown
COG id: COG3576
COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14590; Mature: 14459
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARDKGLDIATVAMGRYILLTTFTKDGIPKPTPMWFVTEGDELLMTTGGDSWKIKRIRRS CCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCEEEEECCCEEEEEECCCCEEEEEECCC PKVTVAVCTQRGRVISPTAEATAAVVEDPASVERIRATVIKRYGLFGRMVSAFNSRRVGV CCEEEEEECCCCEEECCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE RVGISVTLGAPEGH EEEEEEEECCCCCC >Mature Secondary Structure ARDKGLDIATVAMGRYILLTTFTKDGIPKPTPMWFVTEGDELLMTTGGDSWKIKRIRRS CCCCCCCEEEEECCCEEEEEEECCCCCCCCCCEEEEECCCEEEEEECCCCEEEEEECCC PKVTVAVCTQRGRVISPTAEATAAVVEDPASVERIRATVIKRYGLFGRMVSAFNSRRVGV CCEEEEEECCCCEEECCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE RVGISVTLGAPEGH EEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA