Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169629270
Identifier: 169629270
GI number: 169629270
Start: 2198526
End: 2199413
Strand: Direct
Name: 169629270
Synonym: MAB_2184
Alternate gene names: NA
Gene position: 2198526-2199413 (Clockwise)
Preceding gene: 169629269
Following gene: 169629271
Centisome position: 43.39
GC content: 64.3
Gene sequence:
>888_bases ATGGCAGCGGTTTTTGTCGGTAGCGAGGCGGTCTCGGCAGGTCAGCTCACTCGCCATGAGCTTCAGCGCTTTTATCGGCC CATCTTTCGTGGTGTGTACCTTCCGAAATCTGCCGAACCGACCCTGCGGGACAGGACCGTGGCGGCATGGCTGGCCTCGG GGCGCCGGGGAGTGGTCGCGGGATTGGCGGCGTCGAATCTGCACGGCGCGAGCTGGGTCGATCACGACGTGCCGATCGAG TTGGTCGGCGTGAAATGCCGGCAACAGGAGGGACTCATCGCCCGAAACGAGCGCATTGGTGCCGATGAGATCACCCGCAT TTCGGGTCTACCAGTGACACACCGGGTACGCACCGCGTTCGACCTGGGCCGTTATCAGCCACGGACCCGGGCCATGGGGT GTCTGGATGCGCTGATGCGGAACCAGGTTTTCGCGCTCGATGAGGTCGCGGGATTGTCGCAGCGTTATCCGAAGGTGCGC GGTGTGCGGCAGCTGCGAGAACTGCTCCCGTTGATCGATGCCGGCGCGCAATCACCGCGCGAGAGCCTGATTCGGCTACA GCTGCGCGACGCGGGGCTGCCGCGGGCACAGACCCAGGTGCCCGTGTTCGACGGATACACGCCCATCGCCTTCCTGGATA TCGGCTGGCCGCAATATCTGGTCGCTGTCGAGTACGACGGCGACCACCACCGCAGGGATCGCCGCCAGTACGTCAAAGAC CTGGCACGACTGCGCATGCTCGAGGAGCGTGGCTGGACCGTCATCCGCGTAATCGCCGAAGAATCGCCCGGAGCATGGAT CGCGCGGACGACCGCAGCCCTGCGGAGCCGGGGCTGTCACATCGAGATCGACGAAATGCAGCGATCTACTCGACCTTTCG CTGCATAA
Upstream 100 bases:
>100_bases CATCGCTCGCCCAGACCTGCCTTTTGCAGGCATCTACCCGTACTTTCGCTGCGAAACGTCGATCTCGAGGAATGTCGGTC GTGTAGGGCAGCATGCGTGC
Downstream 100 bases:
>100_bases CGCGGCTCCGGGTGTTCGCGCGTCCTCTCGAACAAACTTTCGCCGTCCTCTAAGCTTTCCGCCGTGGCGATCTCCAAAGT CGAGCGGTTGATGAACCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MAAVFVGSEAVSAGQLTRHELQRFYRPIFRGVYLPKSAEPTLRDRTVAAWLASGRRGVVAGLAASNLHGASWVDHDVPIE LVGVKCRQQEGLIARNERIGADEITRISGLPVTHRVRTAFDLGRYQPRTRAMGCLDALMRNQVFALDEVAGLSQRYPKVR GVRQLRELLPLIDAGAQSPRESLIRLQLRDAGLPRAQTQVPVFDGYTPIAFLDIGWPQYLVAVEYDGDHHRRDRRQYVKD LARLRMLEERGWTVIRVIAEESPGAWIARTTAALRSRGCHIEIDEMQRSTRPFAA
Sequences:
>Translated_295_residues MAAVFVGSEAVSAGQLTRHELQRFYRPIFRGVYLPKSAEPTLRDRTVAAWLASGRRGVVAGLAASNLHGASWVDHDVPIE LVGVKCRQQEGLIARNERIGADEITRISGLPVTHRVRTAFDLGRYQPRTRAMGCLDALMRNQVFALDEVAGLSQRYPKVR GVRQLRELLPLIDAGAQSPRESLIRLQLRDAGLPRAQTQVPVFDGYTPIAFLDIGWPQYLVAVEYDGDHHRRDRRQYVKD LARLRMLEERGWTVIRVIAEESPGAWIARTTAALRSRGCHIEIDEMQRSTRPFAA >Mature_294_residues AAVFVGSEAVSAGQLTRHELQRFYRPIFRGVYLPKSAEPTLRDRTVAAWLASGRRGVVAGLAASNLHGASWVDHDVPIEL VGVKCRQQEGLIARNERIGADEITRISGLPVTHRVRTAFDLGRYQPRTRAMGCLDALMRNQVFALDEVAGLSQRYPKVRG VRQLRELLPLIDAGAQSPRESLIRLQLRDAGLPRAQTQVPVFDGYTPIAFLDIGWPQYLVAVEYDGDHHRRDRRQYVKDL ARLRMLEERGWTVIRVIAEESPGAWIARTTAALRSRGCHIEIDEMQRSTRPFAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33182; Mature: 33050
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVFVGSEAVSAGQLTRHELQRFYRPIFRGVYLPKSAEPTLRDRTVAAWLASGRRGVVA CEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE GLAASNLHGASWVDHDVPIELVGVKCRQQEGLIARNERIGADEITRISGLPVTHRVRTAF EHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCEECCCCCCHHHHHHHCCCCCHHHHHHHH DLGRYQPRTRAMGCLDALMRNQVFALDEVAGLSQRYPKVRGVRQLRELLPLIDAGAQSPR HHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHH ESLIRLQLRDAGLPRAQTQVPVFDGYTPIAFLDIGWPQYLVAVEYDGDHHRRDRRQYVKD HHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEECCCCEEEEEEEECCCHHHHHHHHHHHH LARLRMLEERGWTVIRVIAEESPGAWIARTTAALRSRGCHIEIDEMQRSTRPFAA HHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEEHHHHHHCCCCCCC >Mature Secondary Structure AAVFVGSEAVSAGQLTRHELQRFYRPIFRGVYLPKSAEPTLRDRTVAAWLASGRRGVVA EEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE GLAASNLHGASWVDHDVPIELVGVKCRQQEGLIARNERIGADEITRISGLPVTHRVRTAF EHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCEECCCCCCHHHHHHHCCCCCHHHHHHHH DLGRYQPRTRAMGCLDALMRNQVFALDEVAGLSQRYPKVRGVRQLRELLPLIDAGAQSPR HHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHH ESLIRLQLRDAGLPRAQTQVPVFDGYTPIAFLDIGWPQYLVAVEYDGDHHRRDRRQYVKD HHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEECCCCEEEEEEEECCCHHHHHHHHHHHH LARLRMLEERGWTVIRVIAEESPGAWIARTTAALRSRGCHIEIDEMQRSTRPFAA HHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEEHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]