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The map label for this gene is yngJ [H]

Identifier: 169629171

GI number: 169629171

Start: 2085816

End: 2087015

Strand: Direct

Name: yngJ [H]

Synonym: MAB_2085

Alternate gene names: 169629171

Gene position: 2085816-2087015 (Clockwise)

Preceding gene: 169629170

Following gene: 169629173

Centisome position: 41.16

GC content: 61.08

Gene sequence:

>1200_bases
ATGACGGACGCTGGCACGACCACGGCAAGCGAGGATGGGGCAGCTCGTTTCGTTGTCGCCCCGGAGGCGTGGACCACGCC
GGAGCGACGAGCGCTGAGCCAAATGGCGCGGTCTTTCGTGGAACGTGAAATCGCGCCGAAGCTAGCGGAATGGGAGCACG
TGGGTGAGATTCCACGCGACCTGCATCTCAATGCTGCCGAGGTGGGGCTTCTCGGAATCGGGTTCCCGGAAGAAGTCGGC
GGCAGCGGCGGCAATGCGATTGACTCTGCACTGGTCACTGAGGCCATCCTGGCCGCAGGCGGGTCCACTGGCGTCTGCGC
CGCCTTGTTCACCCATGGCATTGCCCTTCCCCACATTGCCGCCAATGGCTCCGACGCCCTGATTGAACGATATGTCCGTC
CTACGCTCGCAGGAAAGATGATCGGCTCGCTGGGCGTTACCGAGCCTGGGGCAGGCTCAGATGTCGCGAATCTGCGCACA
CGCGCGGTGCGCGAGGGGGACACCTACGTGGTCAACGGAGCAAAGACGTTCATCACCAGCGGAGTTCGAGCGGACTTCGT
TACTACGGCGGTACGCACCGGCGGACCGGGTTACGGTGGAGTTTCATTGCTTGTGATCGACAAGAATTCGCCTGGATTCG
AAGTGTCCCGCCGGTTAGACAAGATGGGGTGGCGATGTAGCGACACCGCCGAGTTGTCTTTCGTCGACGTTCGCGTACCG
GCTGACAACCTGGTGGGGGCAGAGAACAGTGGGTTTTTGCAGATCATGCAGCAATTTCAGGCTGAACGGCTCGGCATCGC
CGTCCAGGCGTACGCGACGGCGGGTCGGGCTCTCGACCTTGCCAAGAGTTGGGCGCGGGAACGTGAAACGTTCGGTAGAC
CCTTGACGGGGCGCCAGATCATTCGCCATAAGCTTGCGGAGATGGCTCGACAGGTCGACGTGGCGTGCACCTACACCCGT
GCGGTCATGCAGAGGTGGCTAGCGGGGGAGGATGTCGTTGCCGAGGTGTCGATGGCCAAGAACACCGCTGTGTATGCGTG
CGACTACGTGGTCAATGAGGCGGTTCAGATCTTCGGTGGGATGGGCTACATGCGTGAGTCTGAGATCGAGAGACACTATC
GAGATTGCCGAATTCTCGGAATAGGCGGCGGCACCAACGAAATCATGAACGAGGTCATCGCCAAACGTATCGGACTCTAG

Upstream 100 bases:

>100_bases
CTTAGGCTGCCGCGCGTCGCGTCCTCGTTTCCCGTCCTGAGGACGGCAAGCATTAGACACCTTGTAATCAATCATCCATC
AAATTCTCTCGGAGGCTGAG

Downstream 100 bases:

>100_bases
CTACTTGATTGAATCGCCCTGACTTTCCCGGAGGCTCGGGTTATTGGATTCCGGCCAGGGGTTGGTCGGTCCCATGTGCA
TCGTAGAACGCGGCTTCGAA

Product: acyl CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MTDAGTTTASEDGAARFVVAPEAWTTPERRALSQMARSFVEREIAPKLAEWEHVGEIPRDLHLNAAEVGLLGIGFPEEVG
GSGGNAIDSALVTEAILAAGGSTGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGSLGVTEPGAGSDVANLRT
RAVREGDTYVVNGAKTFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVP
ADNLVGAENSGFLQIMQQFQAERLGIAVQAYATAGRALDLAKSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTR
AVMQRWLAGEDVVAEVSMAKNTAVYACDYVVNEAVQIFGGMGYMRESEIERHYRDCRILGIGGGTNEIMNEVIAKRIGL

Sequences:

>Translated_399_residues
MTDAGTTTASEDGAARFVVAPEAWTTPERRALSQMARSFVEREIAPKLAEWEHVGEIPRDLHLNAAEVGLLGIGFPEEVG
GSGGNAIDSALVTEAILAAGGSTGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGSLGVTEPGAGSDVANLRT
RAVREGDTYVVNGAKTFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVP
ADNLVGAENSGFLQIMQQFQAERLGIAVQAYATAGRALDLAKSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTR
AVMQRWLAGEDVVAEVSMAKNTAVYACDYVVNEAVQIFGGMGYMRESEIERHYRDCRILGIGGGTNEIMNEVIAKRIGL
>Mature_398_residues
TDAGTTTASEDGAARFVVAPEAWTTPERRALSQMARSFVEREIAPKLAEWEHVGEIPRDLHLNAAEVGLLGIGFPEEVGG
SGGNAIDSALVTEAILAAGGSTGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGSLGVTEPGAGSDVANLRTR
AVREGDTYVVNGAKTFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVPA
DNLVGAENSGFLQIMQQFQAERLGIAVQAYATAGRALDLAKSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTRA
VMQRWLAGEDVVAEVSMAKNTAVYACDYVVNEAVQIFGGMGYMRESEIERHYRDCRILGIGGGTNEIMNEVIAKRIGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=376, Percent_Identity=35.9042553191489, Blast_Score=240, Evalue=1e-63,
Organism=Homo sapiens, GI7656849, Length=381, Percent_Identity=32.2834645669291, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI4557233, Length=404, Percent_Identity=36.1386138613861, Blast_Score=211, Evalue=7e-55,
Organism=Homo sapiens, GI187960098, Length=377, Percent_Identity=34.7480106100796, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI4557231, Length=375, Percent_Identity=34.6666666666667, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI226958412, Length=375, Percent_Identity=30.6666666666667, Blast_Score=195, Evalue=6e-50,
Organism=Homo sapiens, GI226958414, Length=332, Percent_Identity=31.3253012048193, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI4501859, Length=379, Percent_Identity=29.5514511873351, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI21361497, Length=366, Percent_Identity=30.327868852459, Blast_Score=151, Evalue=9e-37,
Organism=Homo sapiens, GI76496475, Length=390, Percent_Identity=29.7435897435897, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI4557235, Length=341, Percent_Identity=31.9648093841642, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI48976061, Length=404, Percent_Identity=25.7425742574257, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI211971008, Length=404, Percent_Identity=25.7425742574257, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI38505218, Length=342, Percent_Identity=26.6081871345029, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI4503943, Length=368, Percent_Identity=25, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI7669494, Length=343, Percent_Identity=25.6559766763848, Blast_Score=89, Evalue=8e-18,
Organism=Escherichia coli, GI87081958, Length=346, Percent_Identity=31.5028901734104, Blast_Score=158, Evalue=6e-40,
Organism=Escherichia coli, GI1786223, Length=342, Percent_Identity=28.0701754385965, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI87082384, Length=259, Percent_Identity=31.2741312741313, Blast_Score=92, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17505929, Length=364, Percent_Identity=33.7912087912088, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17534899, Length=374, Percent_Identity=32.620320855615, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17551932, Length=372, Percent_Identity=33.0645161290323, Blast_Score=201, Evalue=8e-52,
Organism=Caenorhabditis elegans, GI17569725, Length=379, Percent_Identity=31.1345646437995, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17533517, Length=366, Percent_Identity=33.0601092896175, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17570075, Length=365, Percent_Identity=33.4246575342466, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17538396, Length=378, Percent_Identity=30.1587301587302, Blast_Score=179, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17508101, Length=385, Percent_Identity=28.8311688311688, Blast_Score=171, Evalue=9e-43,
Organism=Caenorhabditis elegans, GI17506239, Length=381, Percent_Identity=28.6089238845144, Blast_Score=151, Evalue=7e-37,
Organism=Caenorhabditis elegans, GI71990804, Length=278, Percent_Identity=32.0143884892086, Blast_Score=141, Evalue=6e-34,
Organism=Caenorhabditis elegans, GI71985184, Length=386, Percent_Identity=28.7564766839378, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI17534353, Length=374, Percent_Identity=23.7967914438503, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI32563615, Length=233, Percent_Identity=30.0429184549356, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI71982178, Length=291, Percent_Identity=25.085910652921, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71985192, Length=296, Percent_Identity=28.0405405405405, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17562446, Length=335, Percent_Identity=24.7761194029851, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI21356377, Length=376, Percent_Identity=33.7765957446808, Blast_Score=201, Evalue=9e-52,
Organism=Drosophila melanogaster, GI24660351, Length=376, Percent_Identity=32.9787234042553, Blast_Score=196, Evalue=2e-50,
Organism=Drosophila melanogaster, GI21355753, Length=376, Percent_Identity=31.3829787234043, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24646207, Length=383, Percent_Identity=31.0704960835509, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI24666513, Length=380, Percent_Identity=29.7368421052632, Blast_Score=165, Evalue=4e-41,
Organism=Drosophila melanogaster, GI281363737, Length=341, Percent_Identity=31.9648093841642, Blast_Score=148, Evalue=8e-36,
Organism=Drosophila melanogaster, GI19920834, Length=402, Percent_Identity=25.1243781094527, Blast_Score=111, Evalue=8e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42652; Mature: 42521

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAGTTTASEDGAARFVVAPEAWTTPERRALSQMARSFVEREIAPKLAEWEHVGEIPRD
CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LHLNAAEVGLLGIGFPEEVGGSGGNAIDSALVTEAILAAGGSTGVCAALFTHGIALPHIA
CCCCHHHHCEEECCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEE
ANGSDALIERYVRPTLAGKMIGSLGVTEPGAGSDVANLRTRAVREGDTYVVNGAKTFITS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHC
GVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVP
CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECC
ADNLVGAENSGFLQIMQQFQAERLGIAVQAYATAGRALDLAKSWARERETFGRPLTGRQI
HHHHCCCCCCCHHHHHHHHHHHHHCEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHH
IRHKLAEMARQVDVACTYTRAVMQRWLAGEDVVAEVSMAKNTAVYACDYVVNEAVQIFGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHCC
MGYMRESEIERHYRDCRILGIGGGTNEIMNEVIAKRIGL
CCCHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDAGTTTASEDGAARFVVAPEAWTTPERRALSQMARSFVEREIAPKLAEWEHVGEIPRD
CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LHLNAAEVGLLGIGFPEEVGGSGGNAIDSALVTEAILAAGGSTGVCAALFTHGIALPHIA
CCCCHHHHCEEECCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEE
ANGSDALIERYVRPTLAGKMIGSLGVTEPGAGSDVANLRTRAVREGDTYVVNGAKTFITS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHC
GVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVP
CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECC
ADNLVGAENSGFLQIMQQFQAERLGIAVQAYATAGRALDLAKSWARERETFGRPLTGRQI
HHHHCCCCCCCHHHHHHHHHHHHHCEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHH
IRHKLAEMARQVDVACTYTRAVMQRWLAGEDVVAEVSMAKNTAVYACDYVVNEAVQIFGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHCC
MGYMRESEIERHYRDCRILGIGGGTNEIMNEVIAKRIGL
CCCHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]