Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010397 |
Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169629165
Identifier: 169629165
GI number: 169629165
Start: 2079305
End: 2079958
Strand: Direct
Name: 169629165
Synonym: MAB_2079
Alternate gene names: NA
Gene position: 2079305-2079958 (Clockwise)
Preceding gene: 169629164
Following gene: 169629166
Centisome position: 41.03
GC content: 62.54
Gene sequence:
>654_bases ATGACCGTCGACCACAGCCCCTACCTCGAACCCACGGAGTTTCTTGACTGGCAACAAGATTCGGTACGTGACTTCGTGTC ATCGGCGATCCGTGGTGCCTGCGGCGACTCCGAGAAGGCCATCGCCATCTTCACCGCGGTCCGTGACTCCATTTGGTACG ACCCCTACACGGTGACCGACAACCCGCACGCGTATCGCGCCAGCACCGTCGCGACCGCAGAACGGGCCTACTGCGTCCCG AAGGCCGTGCTCTTGACTGCAGCGTGCCGAGCGGCGGGAATCCCGGCGCGGCTGGGGTTCGCCGACGTCCGAAACCACCT CCAGACCAAGGCATTGCGCGAGCGGATGGGTGGTAGCGACGTTTTCGTCTACCACGGCTACAGTCTCATGTTCCTCAACG GTGCGTGGGTAAAGGCCACCCCGGCGTTCAATCGCGAGCTGTGCGCACGCTTCGGTGTCTCGCCGATCGAATTCGACGGC CGTAGCGACGCGCTACTCCATGGTTTCACCGCTGACGGCACCCAGCACATGGAGTATCTGCGCGACCGGGGAGCCTACGA CGATCTACCCCTAGCAGACATCCTGCAAGCACTGAGAACGCATTACGGCACATTCATCGATCAGCCGAACAGCCGTCCCG ACCTCTTCGCCTGA
Upstream 100 bases:
>100_bases GTTCGTTCACTTGGAAGGTTCCGGAGAACTATCACGTCCGATGGGACAACACCTCGCTGCCCATTCCGGTGGACGGACTT CCGTTGGAGATGAAGCGCCG
Downstream 100 bases:
>100_bases AAGGGCACTACACGATGCAAAGCACAATGCAAAATGTTCCGCTCACGGTGTCGGCGATCGTCCAGCATGCGGCAGCCATA CACGGTGACAGCGAGGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase Domain-Containing Protein; Transglutaminase-Like; Transglutaminase-Like S Cysteine Protease-Like Protein; Transglutaminase-Like Cysteine Protease
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MTVDHSPYLEPTEFLDWQQDSVRDFVSSAIRGACGDSEKAIAIFTAVRDSIWYDPYTVTDNPHAYRASTVATAERAYCVP KAVLLTAACRAAGIPARLGFADVRNHLQTKALRERMGGSDVFVYHGYSLMFLNGAWVKATPAFNRELCARFGVSPIEFDG RSDALLHGFTADGTQHMEYLRDRGAYDDLPLADILQALRTHYGTFIDQPNSRPDLFA
Sequences:
>Translated_217_residues MTVDHSPYLEPTEFLDWQQDSVRDFVSSAIRGACGDSEKAIAIFTAVRDSIWYDPYTVTDNPHAYRASTVATAERAYCVP KAVLLTAACRAAGIPARLGFADVRNHLQTKALRERMGGSDVFVYHGYSLMFLNGAWVKATPAFNRELCARFGVSPIEFDG RSDALLHGFTADGTQHMEYLRDRGAYDDLPLADILQALRTHYGTFIDQPNSRPDLFA >Mature_216_residues TVDHSPYLEPTEFLDWQQDSVRDFVSSAIRGACGDSEKAIAIFTAVRDSIWYDPYTVTDNPHAYRASTVATAERAYCVPK AVLLTAACRAAGIPARLGFADVRNHLQTKALRERMGGSDVFVYHGYSLMFLNGAWVKATPAFNRELCARFGVSPIEFDGR SDALLHGFTADGTQHMEYLRDRGAYDDLPLADILQALRTHYGTFIDQPNSRPDLFA
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24147; Mature: 24016
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVDHSPYLEPTEFLDWQQDSVRDFVSSAIRGACGDSEKAIAIFTAVRDSIWYDPYTVTD CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCEEECC NPHAYRASTVATAERAYCVPKAVLLTAACRAAGIPARLGFADVRNHLQTKALRERMGGSD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHCCCCE VFVYHGYSLMFLNGAWVKATPAFNRELCARFGVSPIEFDGRSDALLHGFTADGTQHMEYL EEEECCEEEEEEECCEEEECCCCCHHHHHHHCCCCEEECCCCCCEEEECCCCCHHHHHHH RDRGAYDDLPLADILQALRTHYGTFIDQPNSRPDLFA HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TVDHSPYLEPTEFLDWQQDSVRDFVSSAIRGACGDSEKAIAIFTAVRDSIWYDPYTVTD CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCEEECC NPHAYRASTVATAERAYCVPKAVLLTAACRAAGIPARLGFADVRNHLQTKALRERMGGSD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHCCCCE VFVYHGYSLMFLNGAWVKATPAFNRELCARFGVSPIEFDGRSDALLHGFTADGTQHMEYL EEEECCEEEEEEECCEEEECCCCCHHHHHHHCCCCEEECCCCCCEEEECCCCCHHHHHHH RDRGAYDDLPLADILQALRTHYGTFIDQPNSRPDLFA HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA