Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628948
Identifier: 169628948
GI number: 169628948
Start: 1857758
End: 1858498
Strand: Direct
Name: 169628948
Synonym: MAB_1860
Alternate gene names: NA
Gene position: 1857758-1858498 (Clockwise)
Preceding gene: 169628947
Following gene: 169628950
Centisome position: 36.66
GC content: 63.16
Gene sequence:
>741_bases ATGATGCCCATAAGGGTGTGGGCCGCGTTCGGCCGCAACGATATTCGTGGCACCTATCGCGATCCGCTGCTGATCATGGT GGTGCTGGCCCCGATCATCTGGACCACTGGCGTGGCGGTATTGACCCCGCAGGCCACCGACTTGCTGTCTGCTACCAGGG GATTCGACCTGGTTCCGTACTACCCGTTGGTGCTGACAGCCTTCCTGCTGCTCACCAGCATCATCATCCCCGGAGCGCTG GCGGCGTTTCTGGTCCTGGATGACGTCGACGCCGGGACGCTGACGGCGCTGCGGGTCACGCCGGTGCCGATGTCGGGGTA TTTCCTGTACCGGGCCGCCACGGTCGTCGTGATCACCACCGTGTACGTGGTCGCGACCTTGTCCCTGAGTGGCATCTTGG AGCCCGGCGTGCTACCCGCCCTCATTCCCATCGGGATGCTCTCCGGGCTTTCGGCGGTGGTGACACTGCTCTTGGTGATC GCCTTTGCCAACAACAAGATTCAGGGACTGGCCGCCGTACGCGCGCTCGGCATGCTGATCGCGGGATTGCCCTGTTTGCC GTGGTTCATTCACTCCAACTGGGGATACGCCTTTGGCGTGCTGCCCCCGTTCTGGGCGGCGAAGGCCTTTTGGGTGGCCA GTGCCCACGGCATGTGGTGGCCCTTTGTGCTCATCGGGGTTGCCTACAACCTGCTGATCGCATGGGCGCTGCTCCGGCGT TTCCTTGCCAAGAATCTCTAG
Upstream 100 bases:
>100_bases TGTACGCGGTGGGCTATCCCGTGCTGGGCATCGCCGGGCTCTCCTGGCTCTGCAAGATCGCCTTCGGCAAGTACGTCGTG GCGCAGTCCGGCGGAATGTC
Downstream 100 bases:
>100_bases TCGAGCACCTTGATGGACAATGTGGGTTTGGGGGCATCTCCTGACTGCACCCGATCCCATGCGGCATCGATGAGCGGCTG AAGCAGCAGCGCTCCCATCT
Product: antibiotic ABC transporter membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MMPIRVWAAFGRNDIRGTYRDPLLIMVVLAPIIWTTGVAVLTPQATDLLSATRGFDLVPYYPLVLTAFLLLTSIIIPGAL AAFLVLDDVDAGTLTALRVTPVPMSGYFLYRAATVVVITTVYVVATLSLSGILEPGVLPALIPIGMLSGLSAVVTLLLVI AFANNKIQGLAAVRALGMLIAGLPCLPWFIHSNWGYAFGVLPPFWAAKAFWVASAHGMWWPFVLIGVAYNLLIAWALLRR FLAKNL
Sequences:
>Translated_246_residues MMPIRVWAAFGRNDIRGTYRDPLLIMVVLAPIIWTTGVAVLTPQATDLLSATRGFDLVPYYPLVLTAFLLLTSIIIPGAL AAFLVLDDVDAGTLTALRVTPVPMSGYFLYRAATVVVITTVYVVATLSLSGILEPGVLPALIPIGMLSGLSAVVTLLLVI AFANNKIQGLAAVRALGMLIAGLPCLPWFIHSNWGYAFGVLPPFWAAKAFWVASAHGMWWPFVLIGVAYNLLIAWALLRR FLAKNL >Mature_246_residues MMPIRVWAAFGRNDIRGTYRDPLLIMVVLAPIIWTTGVAVLTPQATDLLSATRGFDLVPYYPLVLTAFLLLTSIIIPGAL AAFLVLDDVDAGTLTALRVTPVPMSGYFLYRAATVVVITTVYVVATLSLSGILEPGVLPALIPIGMLSGLSAVVTLLLVI AFANNKIQGLAAVRALGMLIAGLPCLPWFIHSNWGYAFGVLPPFWAAKAFWVASAHGMWWPFVLIGVAYNLLIAWALLRR FLAKNL
Specific function: Part of the ABC transporter complex Rv2686c/Rv2687c/Rv2688c involved in fluoroquinolones export. Confers resistance to ciprofloxacin and, to a lesser extent, norfloxacin, moxifloxacin and sparfloxacin. Probably responsible for the translocation of the sub
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26562; Mature: 26562
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPIRVWAAFGRNDIRGTYRDPLLIMVVLAPIIWTTGVAVLTPQATDLLSATRGFDLVPY CCCEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHCCCCCCCH YPLVLTAFLLLTSIIIPGALAAFLVLDDVDAGTLTALRVTPVPMSGYFLYRAATVVVITT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH VYVVATLSLSGILEPGVLPALIPIGMLSGLSAVVTLLLVIAFANNKIQGLAAVRALGMLI HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AGLPCLPWFIHSNWGYAFGVLPPFWAAKAFWVASAHGMWWPFVLIGVAYNLLIAWALLRR HCCCHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH FLAKNL HHHHCC >Mature Secondary Structure MMPIRVWAAFGRNDIRGTYRDPLLIMVVLAPIIWTTGVAVLTPQATDLLSATRGFDLVPY CCCEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHCCCCCCCH YPLVLTAFLLLTSIIIPGALAAFLVLDDVDAGTLTALRVTPVPMSGYFLYRAATVVVITT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH VYVVATLSLSGILEPGVLPALIPIGMLSGLSAVVTLLLVIAFANNKIQGLAAVRALGMLI HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AGLPCLPWFIHSNWGYAFGVLPPFWAAKAFWVASAHGMWWPFVLIGVAYNLLIAWALLRR HCCCHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH FLAKNL HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]