Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is prtS [H]
Identifier: 169628937
GI number: 169628937
Start: 1847878
End: 1848921
Strand: Direct
Name: prtS [H]
Synonym: MAB_1849
Alternate gene names: 169628937
Gene position: 1847878-1848921 (Clockwise)
Preceding gene: 169628936
Following gene: 169628939
Centisome position: 36.47
GC content: 64.94
Gene sequence:
>1044_bases ATGTGCCAGCGTTTCATCATCCCTCCGGCCGTGCTGTCCCGATTGGCCGAGGACGGCGATATCGCCGAAGACTCACGCGC CGCCCTCTCGGCCACCGCGGCATGCGAATTGTCTTGGCGCACCTTGCGCAATGCGCACACGCGCGCCACTCAGGCCAGCC TCCTGACAAGCCGGGCCGCCGCCCTCGGAGCCGCCGCCACCGGGCTGGCCAAGGTTCCCGAGACGCCCGTGTTCGATTGC CGGCAGACCACCTCGTTGCCGGGCGTGGCCGTGGCCGACCCTGCCACCTCCAAGGACGCCACGGCACAACGGGCGTTCGA CGAGACGGTGGCGGTCGCAGAGTTCTACCGGAACTGCTTTGGGCGCAACTCCGTTGACAACGCGGGGATGACCCTGGTGT CATCCATTCATTACGGCGTCAAGTACTCCAATGCGTTCTGGAACGGTTCGCAGATGGCCTACGGGGACGGTGACGGCCAG ATATTTCTGGACTTCACCAAGTCCAACGATGTGATCGGTCATGAACTGACACACGGGGTCACGCAATTCACCGCCGGCCT GGATTACGAGAACGAAGCGGGGGCATTGAACGAAAGTGTCTCGGACGTCTTCGGTTCGATGTTCCGGCAATGGCAGGGGC AGCAGAGCGCGGACAAGGCCGACTGGCTGATCGGCAAGGACATCCTGGGACCGCGCGCCCTCGACAAGGGATACACGTGC CTACGCGATATGGCCGACCCCGCCGCCGCGCACTGCCTCTCACCGCAGCCCTCGCACTACCGCGACTACGTGCCGGGCAG TGATCCGCATGAGGGCAGCGGCATCCCCAATCACGCGTTCTACCTGGCCGCCACCAAGTACGGCTCCCACTCCTGGGAGG CCGTGGGAACGGTCTGGTACCAGGCTCTCACCAGCCCGAAGGCAACGAAAAACATGACATTCAAGGCCTTCGCGAAACTC ACCCGGCAGATCGCCGCGGGCCGGACCGGGGCAGACTCGCCACAGGCGGCGATCGATGAGGCCTGGACCGAGGTGGGGCT CTAG
Upstream 100 bases:
>100_bases TCAGGCAGTGTGTCCAAGAACGGATCTGACGAACCGGACTTGACATTTCACCGCTCGCGCGATCAGCGCGCATGGGCGCG AGCGGGTAGGGTCGGTTGGA
Downstream 100 bases:
>100_bases TCGTCCTGCCAGAAGTCGGGGCAGGAGATGTCGACGTAGACGGTGGTGAAGGAGTCGACTGGCTTGCCCGAACGGTTCGG GTTGTGCACCGCCAGCACCC
Product: putative metalloprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MCQRFIIPPAVLSRLAEDGDIAEDSRAALSATAACELSWRTLRNAHTRATQASLLTSRAAALGAAATGLAKVPETPVFDC RQTTSLPGVAVADPATSKDATAQRAFDETVAVAEFYRNCFGRNSVDNAGMTLVSSIHYGVKYSNAFWNGSQMAYGDGDGQ IFLDFTKSNDVIGHELTHGVTQFTAGLDYENEAGALNESVSDVFGSMFRQWQGQQSADKADWLIGKDILGPRALDKGYTC LRDMADPAAAHCLSPQPSHYRDYVPGSDPHEGSGIPNHAFYLAATKYGSHSWEAVGTVWYQALTSPKATKNMTFKAFAKL TRQIAAGRTGADSPQAAIDEAWTEVGL
Sequences:
>Translated_347_residues MCQRFIIPPAVLSRLAEDGDIAEDSRAALSATAACELSWRTLRNAHTRATQASLLTSRAAALGAAATGLAKVPETPVFDC RQTTSLPGVAVADPATSKDATAQRAFDETVAVAEFYRNCFGRNSVDNAGMTLVSSIHYGVKYSNAFWNGSQMAYGDGDGQ IFLDFTKSNDVIGHELTHGVTQFTAGLDYENEAGALNESVSDVFGSMFRQWQGQQSADKADWLIGKDILGPRALDKGYTC LRDMADPAAAHCLSPQPSHYRDYVPGSDPHEGSGIPNHAFYLAATKYGSHSWEAVGTVWYQALTSPKATKNMTFKAFAKL TRQIAAGRTGADSPQAAIDEAWTEVGL >Mature_347_residues MCQRFIIPPAVLSRLAEDGDIAEDSRAALSATAACELSWRTLRNAHTRATQASLLTSRAAALGAAATGLAKVPETPVFDC RQTTSLPGVAVADPATSKDATAQRAFDETVAVAEFYRNCFGRNSVDNAGMTLVSSIHYGVKYSNAFWNGSQMAYGDGDGQ IFLDFTKSNDVIGHELTHGVTQFTAGLDYENEAGALNESVSDVFGSMFRQWQGQQSADKADWLIGKDILGPRALDKGYTC LRDMADPAAAHCLSPQPSHYRDYVPGSDPHEGSGIPNHAFYLAATKYGSHSWEAVGTVWYQALTSPKATKNMTFKAFAKL TRQIAAGRTGADSPQAAIDEAWTEVGL
Specific function: Metalloprotease involved in the inhibition of insect antibacterial peptides. Reduces the antibacterial activity of G.mellonella hemolymph by 50%. Reduces the antibacterial activity of cecropin A by 80% and completely inhibits cecropin B [H]
COG id: COG3227
COG function: function code E; Zinc metalloprotease (elastase)
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M4 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013856 - InterPro: IPR001570 [H]
Pfam domain/function: PF01447 Peptidase_M4; PF02868 Peptidase_M4_C [H]
EC number: NA
Molecular weight: Translated: 37217; Mature: 37217
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCQRFIIPPAVLSRLAEDGDIAEDSRAALSATAACELSWRTLRNAHTRATQASLLTSRAA CCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGAAATGLAKVPETPVFDCRQTTSLPGVAVADPATSKDATAQRAFDETVAVAEFYRNCF HHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH GRNSVDNAGMTLVSSIHYGVKYSNAFWNGSQMAYGDGDGQIFLDFTKSNDVIGHELTHGV CCCCCCHHHHHHHHHHHHCEEECCCEECCCEEEEECCCCEEEEEECCCCCCCHHHHHHHH TQFTAGLDYENEAGALNESVSDVFGSMFRQWQGQQSADKADWLIGKDILGPRALDKGYTC HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHCCCHHHHHHHHH LRDMADPAAAHCLSPQPSHYRDYVPGSDPHEGSGIPNHAFYLAATKYGSHSWEAVGTVWY HHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHH QALTSPKATKNMTFKAFAKLTRQIAAGRTGADSPQAAIDEAWTEVGL HHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MCQRFIIPPAVLSRLAEDGDIAEDSRAALSATAACELSWRTLRNAHTRATQASLLTSRAA CCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGAAATGLAKVPETPVFDCRQTTSLPGVAVADPATSKDATAQRAFDETVAVAEFYRNCF HHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH GRNSVDNAGMTLVSSIHYGVKYSNAFWNGSQMAYGDGDGQIFLDFTKSNDVIGHELTHGV CCCCCCHHHHHHHHHHHHCEEECCCEECCCEEEEECCCCEEEEEECCCCCCCHHHHHHHH TQFTAGLDYENEAGALNESVSDVFGSMFRQWQGQQSADKADWLIGKDILGPRALDKGYTC HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHCCCHHHHHHHHH LRDMADPAAAHCLSPQPSHYRDYVPGSDPHEGSGIPNHAFYLAATKYGSHSWEAVGTVWY HHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHH QALTSPKATKNMTFKAFAKLTRQIAAGRTGADSPQAAIDEAWTEVGL HHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA