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The map label for this gene is prt1 [H]

Identifier: 169628935

GI number: 169628935

Start: 1846498

End: 1847532

Strand: Direct

Name: prt1 [H]

Synonym: MAB_1847

Alternate gene names: 169628935

Gene position: 1846498-1847532 (Clockwise)

Preceding gene: 169628934

Following gene: 169628936

Centisome position: 36.44

GC content: 64.64

Gene sequence:

>1035_bases
ATGTGTTTCATTATCCCTCAAGATGTCCTGCTGCGATTGGCCGACGATGACAGCGTCGCCGACGATTCGCGAACCGCACT
GGCGGCCACGGCCGCATCTGAAACCGCCTGGCGCACATTGCGTGAGGCGCATACCGAGGCCACCCAGGCGGGGCTGGTCG
CCCGCATAGATGCCTTTGCCGGCGTGGCCAAGGCGCTGGCCAAGGCCCCCGGCACCCCGGTGTTCGACTGCAAGCACACC
ATGTCGCTGCCGGGGGTCGCGGTGGCTAGCCCGGGCAGCTCTACAGATGCCTCCGCCAAGAGGGCGTTCACCGAAACCGC
TGCGGTGGCAAAGTTTTACAAGGAGTGCTTCGGCCGCAATTCTGTCGACGACGAGGGCATGACGTTGGTGTCCTCCGTGC
ACTACAGCGTGAACTACTCCAACGCGTTCTGGAACGGCTCGCAGATGACCTACGGCGACGGTGACGGGGAGATCTTCGTC
GACTTCACCGCGTCGAACGACGTGATCGGTCACGAGCTGACTCACGGCGTCACCCAGTACACGGCGGGTCTGCTCTACAA
GAACGAGGCCGGTGGACTCAACGAGAGCATGTCGGATGTGTTCGGATCGATGTTCCGGCAATGGAGCGCGGGCCAGACCG
TCGATCAGGCCGACTGGTTGATCGGCAAGGACATCATGGGTCCGCGCGCCGTCGCCAAGGGCTTCACCTGCCTGCGCGAT
ATGGCCGATCCGGGCGCCCGCCACTGCCTGGCGCCGCAGCCGTCGCACTACCGCGACTACGTGCCGGGCAGTGATCCGCA
CGAGAGCAGCGGCATCCCCAACTACGCGTTCTACCTGGCGGCGACCAAGCATGGCTCGTACTCCTGGCAGGGCGTGGGGA
CGGTCTGGTACGAGGCGCTGACCAGCCCGAAGGCACGTCCGAACATGAAGATGAAGGCCTTCGCCAACCTGACTCGGGAG
ATCTCCGCGGCCAATACGGCCACCGAGTCCGTCCACAAGGCGATTGACGACGCGTGGACCGCGGTCGGGCTGTAG

Upstream 100 bases:

>100_bases
GGGTAGTGCAATACGCAGGCCCCGCACAACCCCGCCTCCACACACTGAGCTCGTCATGTTTCACGACCGCGAATGCGCGG
CCATGTCAAGGAGACTCACG

Downstream 100 bases:

>100_bases
CGTCGGCGTCATGGTGGAGTACCTCATCGACAGACGGGGAGGATTCACCGGGCTACCGGCCAGCGGCACGGTTACTGACC
AGAGCTTGGACCCCGAGGCA

Product: putative metalloprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MCFIIPQDVLLRLADDDSVADDSRTALAATAASETAWRTLREAHTEATQAGLVARIDAFAGVAKALAKAPGTPVFDCKHT
MSLPGVAVASPGSSTDASAKRAFTETAAVAKFYKECFGRNSVDDEGMTLVSSVHYSVNYSNAFWNGSQMTYGDGDGEIFV
DFTASNDVIGHELTHGVTQYTAGLLYKNEAGGLNESMSDVFGSMFRQWSAGQTVDQADWLIGKDIMGPRAVAKGFTCLRD
MADPGARHCLAPQPSHYRDYVPGSDPHESSGIPNYAFYLAATKHGSYSWQGVGTVWYEALTSPKARPNMKMKAFANLTRE
ISAANTATESVHKAIDDAWTAVGL

Sequences:

>Translated_344_residues
MCFIIPQDVLLRLADDDSVADDSRTALAATAASETAWRTLREAHTEATQAGLVARIDAFAGVAKALAKAPGTPVFDCKHT
MSLPGVAVASPGSSTDASAKRAFTETAAVAKFYKECFGRNSVDDEGMTLVSSVHYSVNYSNAFWNGSQMTYGDGDGEIFV
DFTASNDVIGHELTHGVTQYTAGLLYKNEAGGLNESMSDVFGSMFRQWSAGQTVDQADWLIGKDIMGPRAVAKGFTCLRD
MADPGARHCLAPQPSHYRDYVPGSDPHESSGIPNYAFYLAATKHGSYSWQGVGTVWYEALTSPKARPNMKMKAFANLTRE
ISAANTATESVHKAIDDAWTAVGL
>Mature_344_residues
MCFIIPQDVLLRLADDDSVADDSRTALAATAASETAWRTLREAHTEATQAGLVARIDAFAGVAKALAKAPGTPVFDCKHT
MSLPGVAVASPGSSTDASAKRAFTETAAVAKFYKECFGRNSVDDEGMTLVSSVHYSVNYSNAFWNGSQMTYGDGDGEIFV
DFTASNDVIGHELTHGVTQYTAGLLYKNEAGGLNESMSDVFGSMFRQWSAGQTVDQADWLIGKDIMGPRAVAKGFTCLRD
MADPGARHCLAPQPSHYRDYVPGSDPHESSGIPNYAFYLAATKHGSYSWQGVGTVWYEALTSPKARPNMKMKAFANLTRE
ISAANTATESVHKAIDDAWTAVGL

Specific function: Unknown

COG id: COG3227

COG function: function code E; Zinc metalloprotease (elastase)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013856
- InterPro:   IPR001570 [H]

Pfam domain/function: PF01447 Peptidase_M4; PF02868 Peptidase_M4_C [H]

EC number: NA

Molecular weight: Translated: 36866; Mature: 36866

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCFIIPQDVLLRLADDDSVADDSRTALAATAASETAWRTLREAHTEATQAGLVARIDAFA
CEEECCHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVAKALAKAPGTPVFDCKHTMSLPGVAVASPGSSTDASAKRAFTETAAVAKFYKECFGRN
HHHHHHHHCCCCCEECCHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
SVDDEGMTLVSSVHYSVNYSNAFWNGSQMTYGDGDGEIFVDFTASNDVIGHELTHGVTQY
CCCCCCHHEEEHEEEEEECCCEEECCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHH
TAGLLYKNEAGGLNESMSDVFGSMFRQWSAGQTVDQADWLIGKDIMGPRAVAKGFTCLRD
HHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHH
MADPGARHCLAPQPSHYRDYVPGSDPHESSGIPNYAFYLAATKHGSYSWQGVGTVWYEAL
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHH
TSPKARPNMKMKAFANLTREISAANTATESVHKAIDDAWTAVGL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MCFIIPQDVLLRLADDDSVADDSRTALAATAASETAWRTLREAHTEATQAGLVARIDAFA
CEEECCHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVAKALAKAPGTPVFDCKHTMSLPGVAVASPGSSTDASAKRAFTETAAVAKFYKECFGRN
HHHHHHHHCCCCCEECCHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
SVDDEGMTLVSSVHYSVNYSNAFWNGSQMTYGDGDGEIFVDFTASNDVIGHELTHGVTQY
CCCCCCHHEEEHEEEEEECCCEEECCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHH
TAGLLYKNEAGGLNESMSDVFGSMFRQWSAGQTVDQADWLIGKDIMGPRAVAKGFTCLRD
HHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHH
MADPGARHCLAPQPSHYRDYVPGSDPHESSGIPNYAFYLAATKHGSYSWQGVGTVWYEAL
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHH
TSPKARPNMKMKAFANLTREISAANTATESVHKAIDDAWTAVGL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1917878 [H]