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The map label for this gene is yfmM [H]

Identifier: 169628934

GI number: 169628934

Start: 1844817

End: 1846403

Strand: Direct

Name: yfmM [H]

Synonym: MAB_1846

Alternate gene names: 169628934

Gene position: 1844817-1846403 (Clockwise)

Preceding gene: 169628932

Following gene: 169628935

Centisome position: 36.41

GC content: 68.68

Gene sequence:

>1587_bases
ATGTCTGCTGTCATCTCCTGCGGCGCACTCACCTACACACATCCCGATGGCTCCGTCGCGCTCGACGGGCTCGACATGCT
GGTTCCGGCGGGGCGTTCCGGACTGGTAGGTGTCAACGGTTCCGGTAAGTCCACGCTGCTCAAACTCATCGCGGGCGAGC
TGCGGCCCACCTCCGGTATGGTGCACGCCTCGGGTGAGATTGGTTATCTGCCACAGGATCTCACTATCCGCGCCGATCAG
TCGGTGCCCGACCTGCTGGGCCTGACGCCGGTGCTGGCGGCCATCGAGGCCATCGAGAACGGCTCCACCGACCAGACCGA
CTTCGACACCGTCGGTGACGACTGGGATCTGGCCGAGCGGGTGCGTGCCGAACTGGACCGGCTGGGCCTGCCGGCGGCGG
TGCTGGACCGCTCGCTGGGCGAGCTGTCCGGCGGAGAGGTGATTCGGCTGGGCCTGGCCCGGCTGCTGTTGCGGCGTCCC
GACGTTCTGCTGCTCGACGAGCCCACCAACAATCTCGACGGTGAATCCCGGCGGCATCTCTACGACGTGGTGTCCGCCTG
GCAGCGCACCCTGCTGGTGGTCAGCCACGACCGCGAGCTGCTGGAACACGTTGAACGCATCGGCGATCTGCGCGACGGCG
GTGTGACCTGGTACGGCGGCGGATACAGCGATTACGCAGCCGCGGTCGCGGCCGAACAGGAGGCCGCCGCGCAGGCGATC
TCCACGGCCAAGGCCGAGGTGCGCCGTGAGCGGCGTGACCTTGCCGAGGCGGAACGGGTGATCGCGCAGCGCCGCCGCTA
CGGCGCCAAGATGCAGGCCAACAAGCGCGAGCCCAAGATCGTCATGGGGCTGCGCAAGCGGGCCGCGCAGGAGTCGGCGG
CGGCGCTCAAGCAGACCCAAACCGACCGGCTGGACAAGGCCCGCGAGAATTTGGGCGAGGCGCAGACCCGCCTGCGTGCG
GACCGTTCCATCCGTATCGACCTGCCCGGCACCGAGGTTCCCGCCGGACGCGTCGTGCTCACCACCGAACAGCTGGTGCT
GCGCCACGGGGTGCCCGCGCATCTGGATCTGCGGGGACCGCAGCGTGTCGGCCTGGTGGGGCCCAACGGTTCGGGTAAGA
CCACCCTGCTGCACACCATCGCCGGACGCATCCCGGCCGCCGAGGGTTCTGCGACGGTGCATGTTCCGCTCGGGCTCCTG
CCACAGCGCCTGGACCTGCTGGACGATTCGCTGAGTGTTGCCGACAATGTGGCGCGCCGTGCTCCACACGCCGACGTCAA
TGCCGTCCGGGCCAGGCTGGCGCGATTCCTGTTCCGCGGCAATGCAGCCGACAAACTGGTCGGGGCGCTCTCCGGTGGTG
AACGGTTCCGGGCGACACTGGCCGCCGTGCTGCTGGCGGACCCCGCTCCACAGCTGCTGCTGCTCGACGAACCCACCAAC
AACCTGGACTTCGCCTCCTACGACGCGCTGGTCTCCGCGCTTGCCGAGTATCGGGGCGCGGTGCTCGTTGCCAGCCATGA
CCTGGGCTTTCTGGAGGACATCGGGGCCGCGCAGGTGGACTGGAGACCCGATCCGGTAATCGGGTAG

Upstream 100 bases:

>100_bases
TCCCCGACGAAAGGTACGGCATGGATCTGTGAGGTCTGGCAATCCGCCGGCGCGCCATCGCGCGATTTCGGCGACCCCAC
CTCACAGGAAGGTTCTTTCC

Downstream 100 bases:

>100_bases
TGCAATACGCAGGCCCCGCACAACCCCGCCTCCACACACTGAGCTCGTCATGTTTCACGACCGCGAATGCGCGGCCATGT
CAAGGAGACTCACGATGTGT

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 528; Mature: 527

Protein sequence:

>528_residues
MSAVISCGALTYTHPDGSVALDGLDMLVPAGRSGLVGVNGSGKSTLLKLIAGELRPTSGMVHASGEIGYLPQDLTIRADQ
SVPDLLGLTPVLAAIEAIENGSTDQTDFDTVGDDWDLAERVRAELDRLGLPAAVLDRSLGELSGGEVIRLGLARLLLRRP
DVLLLDEPTNNLDGESRRHLYDVVSAWQRTLLVVSHDRELLEHVERIGDLRDGGVTWYGGGYSDYAAAVAAEQEAAAQAI
STAKAEVRRERRDLAEAERVIAQRRRYGAKMQANKREPKIVMGLRKRAAQESAAALKQTQTDRLDKARENLGEAQTRLRA
DRSIRIDLPGTEVPAGRVVLTTEQLVLRHGVPAHLDLRGPQRVGLVGPNGSGKTTLLHTIAGRIPAAEGSATVHVPLGLL
PQRLDLLDDSLSVADNVARRAPHADVNAVRARLARFLFRGNAADKLVGALSGGERFRATLAAVLLADPAPQLLLLDEPTN
NLDFASYDALVSALAEYRGAVLVASHDLGFLEDIGAAQVDWRPDPVIG

Sequences:

>Translated_528_residues
MSAVISCGALTYTHPDGSVALDGLDMLVPAGRSGLVGVNGSGKSTLLKLIAGELRPTSGMVHASGEIGYLPQDLTIRADQ
SVPDLLGLTPVLAAIEAIENGSTDQTDFDTVGDDWDLAERVRAELDRLGLPAAVLDRSLGELSGGEVIRLGLARLLLRRP
DVLLLDEPTNNLDGESRRHLYDVVSAWQRTLLVVSHDRELLEHVERIGDLRDGGVTWYGGGYSDYAAAVAAEQEAAAQAI
STAKAEVRRERRDLAEAERVIAQRRRYGAKMQANKREPKIVMGLRKRAAQESAAALKQTQTDRLDKARENLGEAQTRLRA
DRSIRIDLPGTEVPAGRVVLTTEQLVLRHGVPAHLDLRGPQRVGLVGPNGSGKTTLLHTIAGRIPAAEGSATVHVPLGLL
PQRLDLLDDSLSVADNVARRAPHADVNAVRARLARFLFRGNAADKLVGALSGGERFRATLAAVLLADPAPQLLLLDEPTN
NLDFASYDALVSALAEYRGAVLVASHDLGFLEDIGAAQVDWRPDPVIG
>Mature_527_residues
SAVISCGALTYTHPDGSVALDGLDMLVPAGRSGLVGVNGSGKSTLLKLIAGELRPTSGMVHASGEIGYLPQDLTIRADQS
VPDLLGLTPVLAAIEAIENGSTDQTDFDTVGDDWDLAERVRAELDRLGLPAAVLDRSLGELSGGEVIRLGLARLLLRRPD
VLLLDEPTNNLDGESRRHLYDVVSAWQRTLLVVSHDRELLEHVERIGDLRDGGVTWYGGGYSDYAAAVAAEQEAAAQAIS
TAKAEVRRERRDLAEAERVIAQRRRYGAKMQANKREPKIVMGLRKRAAQESAAALKQTQTDRLDKARENLGEAQTRLRAD
RSIRIDLPGTEVPAGRVVLTTEQLVLRHGVPAHLDLRGPQRVGLVGPNGSGKTTLLHTIAGRIPAAEGSATVHVPLGLLP
QRLDLLDDSLSVADNVARRAPHADVNAVRARLARFLFRGNAADKLVGALSGGERFRATLAAVLLADPAPQLLLLDEPTNN
LDFASYDALVSALAEYRGAVLVASHDLGFLEDIGAAQVDWRPDPVIG

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=515, Percent_Identity=28.9320388349515, Blast_Score=153, Evalue=4e-37,
Organism=Homo sapiens, GI10947137, Length=515, Percent_Identity=26.4077669902913, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI27881506, Length=515, Percent_Identity=26.4077669902913, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI27881501, Length=193, Percent_Identity=29.5336787564767, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI30795238, Length=193, Percent_Identity=29.5336787564767, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI10947135, Length=234, Percent_Identity=31.6239316239316, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI69354671, Length=234, Percent_Identity=31.6239316239316, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI255708477, Length=401, Percent_Identity=25.1870324189526, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI21536376, Length=213, Percent_Identity=28.169014084507, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI42741659, Length=204, Percent_Identity=29.4117647058824, Blast_Score=68, Evalue=3e-11,
Organism=Homo sapiens, GI31657092, Length=189, Percent_Identity=30.1587301587302, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI2367384, Length=541, Percent_Identity=30.8687615526802, Blast_Score=170, Evalue=2e-43,
Organism=Escherichia coli, GI1789751, Length=502, Percent_Identity=30.0796812749004, Blast_Score=162, Evalue=5e-41,
Organism=Escherichia coli, GI1787041, Length=526, Percent_Identity=28.8973384030418, Blast_Score=155, Evalue=4e-39,
Organism=Escherichia coli, GI1787182, Length=512, Percent_Identity=31.640625, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI87081782, Length=547, Percent_Identity=25.2285191956124, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1786698, Length=206, Percent_Identity=29.6116504854369, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1789873, Length=208, Percent_Identity=33.6538461538462, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI87081709, Length=187, Percent_Identity=31.5508021390374, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI87081834, Length=228, Percent_Identity=30.7017543859649, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1787500, Length=204, Percent_Identity=27.4509803921569, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1786703, Length=203, Percent_Identity=33.9901477832512, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787164, Length=197, Percent_Identity=34.010152284264, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI87081791, Length=192, Percent_Identity=31.25, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786253, Length=206, Percent_Identity=31.5533980582524, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1787370, Length=211, Percent_Identity=30.3317535545024, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1788761, Length=204, Percent_Identity=31.3725490196078, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786563, Length=179, Percent_Identity=32.9608938547486, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786398, Length=196, Percent_Identity=30.1020408163265, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788165, Length=161, Percent_Identity=35.4037267080745, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=536, Percent_Identity=27.4253731343284, Blast_Score=143, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI17559834, Length=532, Percent_Identity=26.6917293233083, Blast_Score=136, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17553372, Length=511, Percent_Identity=28.5714285714286, Blast_Score=129, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI17569081, Length=197, Percent_Identity=30.4568527918782, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17565938, Length=208, Percent_Identity=30.7692307692308, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI25146777, Length=219, Percent_Identity=31.5068493150685, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI193202349, Length=220, Percent_Identity=28.6363636363636, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=219, Percent_Identity=29.6803652968037, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=514, Percent_Identity=27.6264591439689, Blast_Score=142, Evalue=9e-35,
Organism=Saccharomyces cerevisiae, GI6321121, Length=547, Percent_Identity=27.7879341864717, Blast_Score=135, Evalue=1e-32,
Organism=Saccharomyces cerevisiae, GI6324314, Length=183, Percent_Identity=30.6010928961749, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6325030, Length=373, Percent_Identity=25.7372654155496, Blast_Score=78, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6323278, Length=223, Percent_Identity=28.6995515695067, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24666836, Length=518, Percent_Identity=27.992277992278, Blast_Score=162, Evalue=4e-40,
Organism=Drosophila melanogaster, GI24641342, Length=530, Percent_Identity=28.8679245283019, Blast_Score=146, Evalue=3e-35,
Organism=Drosophila melanogaster, GI24642252, Length=508, Percent_Identity=27.5590551181102, Blast_Score=134, Evalue=2e-31,
Organism=Drosophila melanogaster, GI18859989, Length=508, Percent_Identity=27.5590551181102, Blast_Score=134, Evalue=2e-31,
Organism=Drosophila melanogaster, GI85725262, Length=214, Percent_Identity=31.3084112149533, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281362751, Length=216, Percent_Identity=27.3148148148148, Blast_Score=79, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24650853, Length=212, Percent_Identity=27.8301886792453, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24650855, Length=212, Percent_Identity=27.8301886792453, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21357907, Length=227, Percent_Identity=26.8722466960352, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24648279, Length=227, Percent_Identity=29.0748898678414, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI161078426, Length=227, Percent_Identity=29.0748898678414, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17136662, Length=216, Percent_Identity=28.7037037037037, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI28574259, Length=207, Percent_Identity=31.4009661835749, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 56553; Mature: 56422

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVISCGALTYTHPDGSVALDGLDMLVPAGRSGLVGVNGSGKSTLLKLIAGELRPTSGM
CCCEEECCEEEEECCCCCEEECCHHHCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCE
VHASGEIGYLPQDLTIRADQSVPDLLGLTPVLAAIEAIENGSTDQTDFDTVGDDWDLAER
EEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
VRAELDRLGLPAAVLDRSLGELSGGEVIRLGLARLLLRRPDVLLLDEPTNNLDGESRRHL
HHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHH
YDVVSAWQRTLLVVSHDRELLEHVERIGDLRDGGVTWYGGGYSDYAAAVAAEQEAAAQAI
HHHHHHHHHEEEEEECCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
STAKAEVRRERRDLAEAERVIAQRRRYGAKMQANKREPKIVMGLRKRAAQESAAALKQTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TDRLDKARENLGEAQTRLRADRSIRIDLPGTEVPAGRVVLTTEQLVLRHGVPAHLDLRGP
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEHHHHHHHCCCCCEEECCCC
QRVGLVGPNGSGKTTLLHTIAGRIPAAEGSATVHVPLGLLPQRLDLLDDSLSVADNVARR
CEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
APHADVNAVRARLARFLFRGNAADKLVGALSGGERFRATLAAVLLADPAPQLLLLDEPTN
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCC
NLDFASYDALVSALAEYRGAVLVASHDLGFLEDIGAAQVDWRPDPVIG
CCCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAVISCGALTYTHPDGSVALDGLDMLVPAGRSGLVGVNGSGKSTLLKLIAGELRPTSGM
CCEEECCEEEEECCCCCEEECCHHHCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCE
VHASGEIGYLPQDLTIRADQSVPDLLGLTPVLAAIEAIENGSTDQTDFDTVGDDWDLAER
EEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
VRAELDRLGLPAAVLDRSLGELSGGEVIRLGLARLLLRRPDVLLLDEPTNNLDGESRRHL
HHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHH
YDVVSAWQRTLLVVSHDRELLEHVERIGDLRDGGVTWYGGGYSDYAAAVAAEQEAAAQAI
HHHHHHHHHEEEEEECCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
STAKAEVRRERRDLAEAERVIAQRRRYGAKMQANKREPKIVMGLRKRAAQESAAALKQTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TDRLDKARENLGEAQTRLRADRSIRIDLPGTEVPAGRVVLTTEQLVLRHGVPAHLDLRGP
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEHHHHHHHCCCCCEEECCCC
QRVGLVGPNGSGKTTLLHTIAGRIPAAEGSATVHVPLGLLPQRLDLLDDSLSVADNVARR
CEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
APHADVNAVRARLARFLFRGNAADKLVGALSGGERFRATLAAVLLADPAPQLLLLDEPTN
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCC
NLDFASYDALVSALAEYRGAVLVASHDLGFLEDIGAAQVDWRPDPVIG
CCCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]