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The map label for this gene is ddpX [H]

Identifier: 169628931

GI number: 169628931

Start: 1842268

End: 1842936

Strand: Direct

Name: ddpX [H]

Synonym: MAB_1843

Alternate gene names: 169628931

Gene position: 1842268-1842936 (Clockwise)

Preceding gene: 169628927

Following gene: 169628932

Centisome position: 36.36

GC content: 69.36

Gene sequence:

>669_bases
ATGATGAAGCGTCTGATCCTCGGTTTCGGGTACGCAGCTCTCGGTATCGGCTGTGCTCTCGGCCAGGTTGCCCCCGCCAG
TGCCGACCCCGACATCCCGCCCGTCAGTGAGGCCGCCCGGGCCGCCGGGCTGGTCGACGTGCGCACCGTGGTGCCCGACG
CCGTGATCGACCTGCGCTACGCCACCACCAACAACTTCACCGGTGTGCAGCTGTATCCGGCCGGTGCGCGCTGCCTGGTG
CACGAGTCGATGGCGCCCGGCCTCAAGACCGCCGCCGACACGCTGCGCACCAATGGGGAGCGGCTGGTCTTCTGGGACTG
CTACCGCCCGCATGAGGTGCAGGTCCGCATGTTCCAGGTGGTGCCCAATCCCAATTGGGTCGCCAAGCCCGGCCAGTACG
CCCGCAGCCACGAGGCCGGACGTTCGGTGGACGTCACCCTGGCCAACGCGCGCGGCCTGGTCGATATGGGGACCGGCTTC
GACGACTTCTCGCCGCGCTCGCTGGCTTTTGCCACCGAAGGGGTGAGCCCCGACCAGCAGGCCAACCGTGCACGCCTGCG
TGCGGCCATGCAAGCCGGTGGGCTGCAGGTGTATTCGGGGGAGTGGTGGCACTTCGACGGTCCCGGCGCGGGTGAGGGGC
GCCCGTTCCTGAACGCGCCCGTCAACTGA

Upstream 100 bases:

>100_bases
CAGCGACCAGACCCACAAACATGCGGCGATCCAGCTTGTGTGCGACCACGATGTGAAGGGTAATACCGGATTATGAAGGT
CCAATGAAGACAATGAAGAG

Downstream 100 bases:

>100_bases
CCGTACGGTGGTACCGCAAACCGGGAAAAATTGGGTAGTCCAGTACCCGGTGTGCGGGCGCCCTGCGGGAGTAATTTCCC
TGGCATGGCTGCGTCACCGA

Product: D-alanyl-D-alanine dipeptidase

Products: NA

Alternate protein names: D-Ala-D-Ala dipeptidase [H]

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MMKRLILGFGYAALGIGCALGQVAPASADPDIPPVSEAARAAGLVDVRTVVPDAVIDLRYATTNNFTGVQLYPAGARCLV
HESMAPGLKTAADTLRTNGERLVFWDCYRPHEVQVRMFQVVPNPNWVAKPGQYARSHEAGRSVDVTLANARGLVDMGTGF
DDFSPRSLAFATEGVSPDQQANRARLRAAMQAGGLQVYSGEWWHFDGPGAGEGRPFLNAPVN

Sequences:

>Translated_222_residues
MMKRLILGFGYAALGIGCALGQVAPASADPDIPPVSEAARAAGLVDVRTVVPDAVIDLRYATTNNFTGVQLYPAGARCLV
HESMAPGLKTAADTLRTNGERLVFWDCYRPHEVQVRMFQVVPNPNWVAKPGQYARSHEAGRSVDVTLANARGLVDMGTGF
DDFSPRSLAFATEGVSPDQQANRARLRAAMQAGGLQVYSGEWWHFDGPGAGEGRPFLNAPVN
>Mature_222_residues
MMKRLILGFGYAALGIGCALGQVAPASADPDIPPVSEAARAAGLVDVRTVVPDAVIDLRYATTNNFTGVQLYPAGARCLV
HESMAPGLKTAADTLRTNGERLVFWDCYRPHEVQVRMFQVVPNPNWVAKPGQYARSHEAGRSVDVTLANARGLVDMGTGF
DDFSPRSLAFATEGVSPDQQANRARLRAAMQAGGLQVYSGEWWHFDGPGAGEGRPFLNAPVN

Specific function: Hydrolyzes D-Ala-D-Ala. May have a role in cell-wall turnover [H]

COG id: COG2173

COG function: function code M; D-alanyl-D-alanine dipeptidase

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M15D family [H]

Homologues:

Organism=Escherichia coli, GI1787763, Length=169, Percent_Identity=37.8698224852071, Blast_Score=119, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009045
- InterPro:   IPR000755 [H]

Pfam domain/function: PF01427 Peptidase_M15 [H]

EC number: =3.4.13.22 [H]

Molecular weight: Translated: 23783; Mature: 23783

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKRLILGFGYAALGIGCALGQVAPASADPDIPPVSEAARAAGLVDVRTVVPDAVIDLRY
CCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCEEHHHHCCCHHEEEEE
ATTNNFTGVQLYPAGARCLVHESMAPGLKTAADTLRTNGERLVFWDCYRPHEVQVRMFQV
ECCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEEE
VPNPNWVAKPGQYARSHEAGRSVDVTLANARGLVDMGTGFDDFSPRSLAFATEGVSPDQQ
ECCCCEECCCCCHHHHHCCCCEEEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCCHH
ANRARLRAAMQAGGLQVYSGEWWHFDGPGAGEGRPFLNAPVN
HHHHHHHHHHHHCCEEEECCCEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMKRLILGFGYAALGIGCALGQVAPASADPDIPPVSEAARAAGLVDVRTVVPDAVIDLRY
CCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCEEHHHHCCCHHEEEEE
ATTNNFTGVQLYPAGARCLVHESMAPGLKTAADTLRTNGERLVFWDCYRPHEVQVRMFQV
ECCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEEE
VPNPNWVAKPGQYARSHEAGRSVDVTLANARGLVDMGTGFDDFSPRSLAFATEGVSPDQQ
ECCCCEECCCCCHHHHHCCCCEEEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCCHH
ANRARLRAAMQAGGLQVYSGEWWHFDGPGAGEGRPFLNAPVN
HHHHHHHHHHHHCCEEEECCCEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 9751644 [H]