Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628926
Identifier: 169628926
GI number: 169628926
Start: 1837703
End: 1838455
Strand: Direct
Name: 169628926
Synonym: MAB_1838
Alternate gene names: NA
Gene position: 1837703-1838455 (Clockwise)
Preceding gene: 169628924
Following gene: 169628927
Centisome position: 36.27
GC content: 66.53
Gene sequence:
>753_bases TTGGTGGTTGCGGCCACCCTGCTACTGGTGACGGCTCCGCTGGCCGCCGCCTGGGGCCCGCAGGGACACAACATCGTGGG CGCGGTCGCCGATGCGAAGCTCTCACCCGCGGCCCGTGCCGAGGTCTCGCGCTTGCTGGCCGGCGAGGCCACCCCGACAC TGGCCGGGGTCGCCAACTGGGCCGACCAGGTGCGTCCCAGCCGTCCCGAGACCGCACCCTGGCACTACGCCGATATCGCC GAGAACAACTGCCAGTACGTGCCCGCGGTGAACGGCGACAACGGCAACAACGTCATCGAGGCCATCCGCAGCCAGACCGC GATCCTGGGCGACACCACCAAAACGGATGCCGAACGCACGGAGGCGCTGAAGTTCGTCGTGCATTTCGTGGGTGACATCC ACCAGCCGATGCATGATGCCTACGCCCGCGACCGCGGTGGCAACGACATCCCACTGACCTACAACGGCCGATCCACCAAC CTGCATTCGGTGTGGGACAGCGGGTTACTGAATACTCGCGGCCTCAGCGATGCCCAATACGCCCAGGTGATCGAGGGATT GCCCGCACCCGATCTCGGCAGCGCCGACCCCGTCGACTGGGCACAGGACACCTGTCAGATCGCTATCGGGGTATACCCCA GTACCTCGACCATCGGCACCGACTACACCAACCAATACCGCCCGGTCGCCGAGGCGCAGCTGCGCCTGGCCGGTGAACGC TTGGCGCGCTTGCTCAATGCCACGTTGACCTAG
Upstream 100 bases:
>100_bases CGGCGACAACTTGACCAATTCATAGATGGAGTAGGCGTCTACCTACGCCGGTACGGCCCCACTGTGTCACCGTGGTGTGG TGATGAAAAGGCTTGGTGCG
Downstream 100 bases:
>100_bases CGGATGGGACCGGCCTGACGCCGTCAATACCCGTCATCGCAATGGTCTACTATGCCTGGATTGGGGATTGGCGGTGACCA CAGTTGGCTGGCCGTCGATT
Product: endonuclease
Products: NA
Alternate protein names: Endonuclease; S1/P1 Endonuclease Family Protein; S1/P1 Nuclease Protein; 3-Nucleotidase/Nuclease
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MVVAATLLLVTAPLAAAWGPQGHNIVGAVADAKLSPAARAEVSRLLAGEATPTLAGVANWADQVRPSRPETAPWHYADIA ENNCQYVPAVNGDNGNNVIEAIRSQTAILGDTTKTDAERTEALKFVVHFVGDIHQPMHDAYARDRGGNDIPLTYNGRSTN LHSVWDSGLLNTRGLSDAQYAQVIEGLPAPDLGSADPVDWAQDTCQIAIGVYPSTSTIGTDYTNQYRPVAEAQLRLAGER LARLLNATLT
Sequences:
>Translated_250_residues MVVAATLLLVTAPLAAAWGPQGHNIVGAVADAKLSPAARAEVSRLLAGEATPTLAGVANWADQVRPSRPETAPWHYADIA ENNCQYVPAVNGDNGNNVIEAIRSQTAILGDTTKTDAERTEALKFVVHFVGDIHQPMHDAYARDRGGNDIPLTYNGRSTN LHSVWDSGLLNTRGLSDAQYAQVIEGLPAPDLGSADPVDWAQDTCQIAIGVYPSTSTIGTDYTNQYRPVAEAQLRLAGER LARLLNATLT >Mature_250_residues MVVAATLLLVTAPLAAAWGPQGHNIVGAVADAKLSPAARAEVSRLLAGEATPTLAGVANWADQVRPSRPETAPWHYADIA ENNCQYVPAVNGDNGNNVIEAIRSQTAILGDTTKTDAERTEALKFVVHFVGDIHQPMHDAYARDRGGNDIPLTYNGRSTN LHSVWDSGLLNTRGLSDAQYAQVIEGLPAPDLGSADPVDWAQDTCQIAIGVYPSTSTIGTDYTNQYRPVAEAQLRLAGER LARLLNATLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26619; Mature: 26619
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVAATLLLVTAPLAAAWGPQGHNIVGAVADAKLSPAARAEVSRLLAGEATPTLAGVANW CHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH ADQVRPSRPETAPWHYADIAENNCQYVPAVNGDNGNNVIEAIRSQTAILGDTTKTDAERT HHHCCCCCCCCCCCEEHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHH EALKFVVHFVGDIHQPMHDAYARDRGGNDIPLTYNGRSTNLHSVWDSGLLNTRGLSDAQY HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHCCCCCCCCCCHHHH AQVIEGLPAPDLGSADPVDWAQDTCQIAIGVYPSTSTIGTDYTNQYRPVAEAQLRLAGER HHHHHCCCCCCCCCCCCCCHHHHCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH LARLLNATLT HHHHHHHCCC >Mature Secondary Structure MVVAATLLLVTAPLAAAWGPQGHNIVGAVADAKLSPAARAEVSRLLAGEATPTLAGVANW CHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH ADQVRPSRPETAPWHYADIAENNCQYVPAVNGDNGNNVIEAIRSQTAILGDTTKTDAERT HHHCCCCCCCCCCCEEHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHH EALKFVVHFVGDIHQPMHDAYARDRGGNDIPLTYNGRSTNLHSVWDSGLLNTRGLSDAQY HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHCCCCCCCCCCHHHH AQVIEGLPAPDLGSADPVDWAQDTCQIAIGVYPSTSTIGTDYTNQYRPVAEAQLRLAGER HHHHHCCCCCCCCCCCCCCHHHHCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH LARLLNATLT HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA