Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628875
Identifier: 169628875
GI number: 169628875
Start: 1788306
End: 1789670
Strand: Direct
Name: 169628875
Synonym: MAB_1786
Alternate gene names: NA
Gene position: 1788306-1789670 (Clockwise)
Preceding gene: 169628874
Following gene: 169628876
Centisome position: 35.29
GC content: 59.27
Gene sequence:
>1365_bases ATGGCGTCTACACCAGAAGAATGGCTCCCCATCCTGACCAAGCGCATCGACGACAACATGCCGCGAGTCCGGCTCCTGGA CCGGTATGTGTCCGGCGACGCACCGCTACCGGAGCAGTCGAAGAACACGAAAGCATCCTGGAAAGCGTTCCAGAAGATGT CCCGCACCAACTGGGGCATGCTGATACGAGACTCAGTTTCTGATCGCATCGTGCCGAACGGAATCACAGTCGACGGGTCC GCGGACTCGGAGACTGCTAAGCAGGCGCAACGCATCTACCGCGACAACCGCATGGATGCCGTTGTGCGGCAGTGGCTCGA CTACGGGCTGACCTTCCGCGATTCATACCTGACTTGCTGGCAGGGAAATGACGGCCAGGCAATAATCACCGCCGATTCCC CCGAAACCATGTACGCCGCAGTAGATCCCCTGCAGCCTTGGCGAGTGCGTGCCGCGATCCGCTACTGGCGCGACATAGAC GAAGAGAAAGACTTTGCGTTCGTTTGGGTGAACGGTGCGCGCCAGAAGTTCTCACGCCCCTGCTACGTGCAGAACATCAA CTCCAAGCGCCTCATGACCAGAATCTCGGGCGGTTGGGAGCCTGAAACCGACCTGATCGAGACTGACGGCGCCCCACCTG TGGTTGTGTACACCAACCCGGGCGGTGCTGGGGTTTTCGAGACCCATATAGATCTCATCAACCGCATCAACTCCGGCGTT CTGCAGCGCTTGTCGACGATGGCGATGCAAGCGTTCCGTCAGCGCGCTCTAAAGAAGGAGGGAGACAAGCCCCTACCGGC GGTCGATGACAAAGGCAACGCCATCGACTATGCGGCCATCTTTGAACCAGCCCCCGGAGCGCTGTGGGATCTCCCACCAG GTGTTGACATTTGGGAATCTGCCACAACCGATGCAAGCCCCATGCTCGCCGCGTCGAAAGAAGACATCCGGCATCTCTCG GCGGCCACGAAAACGCCCCTTCCCATGCTGATGCCCGATGGCGCAAATCAGACGGCGGAAGGCGCGATGAACACCGAGAA GGGCTTCATTTTCAAGTGTGAAGCATGCCTAGCGGTAGTGAAACTCGGCCTCGAAGCCATCATCGTTAAGGCGCTAGAGA CCGAAGGTGTCGCAGACGTAGGCAATGTTGAGGTGTCATTCGAGGCGCCAGCCCGTGTGACACTCTCTGAGAAGTACTCT GCCGCAGCACAAGCGGCGGCAGCAGGGGAGCCGTGGGGCTCAATTGCGCGGAACATCCTCAAGTACTCACCCGACCAGAT TGCACAAGTCGAAAAGGATCGGGCCAAGGAAGAGGCGATGGCGCCACAAGTAGCGCCACCTGCTCCACAAGACTTCCCCC AGTAG
Upstream 100 bases:
>100_bases GTCCTGGACAGCCTGTGTCGATGCTCGACGATCCGGGGCTAAGCCGCGGCCGAAATCTTATGTGCCGAGGCGCATCTACT AAATGACAGAAGGGAGTCCC
Downstream 100 bases:
>100_bases GGGGTTCGCCCGTACGGGCGCCACCAATGCGAAACGCAAAGGAATTTCACATGTCTGATGTGACCCCGAATGACATGCCG GGAGCCGTAACGGAACCGGG
Product: bacteriophage protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MASTPEEWLPILTKRIDDNMPRVRLLDRYVSGDAPLPEQSKNTKASWKAFQKMSRTNWGMLIRDSVSDRIVPNGITVDGS ADSETAKQAQRIYRDNRMDAVVRQWLDYGLTFRDSYLTCWQGNDGQAIITADSPETMYAAVDPLQPWRVRAAIRYWRDID EEKDFAFVWVNGARQKFSRPCYVQNINSKRLMTRISGGWEPETDLIETDGAPPVVVYTNPGGAGVFETHIDLINRINSGV LQRLSTMAMQAFRQRALKKEGDKPLPAVDDKGNAIDYAAIFEPAPGALWDLPPGVDIWESATTDASPMLAASKEDIRHLS AATKTPLPMLMPDGANQTAEGAMNTEKGFIFKCEACLAVVKLGLEAIIVKALETEGVADVGNVEVSFEAPARVTLSEKYS AAAQAAAAGEPWGSIARNILKYSPDQIAQVEKDRAKEEAMAPQVAPPAPQDFPQ
Sequences:
>Translated_454_residues MASTPEEWLPILTKRIDDNMPRVRLLDRYVSGDAPLPEQSKNTKASWKAFQKMSRTNWGMLIRDSVSDRIVPNGITVDGS ADSETAKQAQRIYRDNRMDAVVRQWLDYGLTFRDSYLTCWQGNDGQAIITADSPETMYAAVDPLQPWRVRAAIRYWRDID EEKDFAFVWVNGARQKFSRPCYVQNINSKRLMTRISGGWEPETDLIETDGAPPVVVYTNPGGAGVFETHIDLINRINSGV LQRLSTMAMQAFRQRALKKEGDKPLPAVDDKGNAIDYAAIFEPAPGALWDLPPGVDIWESATTDASPMLAASKEDIRHLS AATKTPLPMLMPDGANQTAEGAMNTEKGFIFKCEACLAVVKLGLEAIIVKALETEGVADVGNVEVSFEAPARVTLSEKYS AAAQAAAAGEPWGSIARNILKYSPDQIAQVEKDRAKEEAMAPQVAPPAPQDFPQ >Mature_453_residues ASTPEEWLPILTKRIDDNMPRVRLLDRYVSGDAPLPEQSKNTKASWKAFQKMSRTNWGMLIRDSVSDRIVPNGITVDGSA DSETAKQAQRIYRDNRMDAVVRQWLDYGLTFRDSYLTCWQGNDGQAIITADSPETMYAAVDPLQPWRVRAAIRYWRDIDE EKDFAFVWVNGARQKFSRPCYVQNINSKRLMTRISGGWEPETDLIETDGAPPVVVYTNPGGAGVFETHIDLINRINSGVL QRLSTMAMQAFRQRALKKEGDKPLPAVDDKGNAIDYAAIFEPAPGALWDLPPGVDIWESATTDASPMLAASKEDIRHLSA ATKTPLPMLMPDGANQTAEGAMNTEKGFIFKCEACLAVVKLGLEAIIVKALETEGVADVGNVEVSFEAPARVTLSEKYSA AAQAAAAGEPWGSIARNILKYSPDQIAQVEKDRAKEEAMAPQVAPPAPQDFPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50091; Mature: 49960
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTPEEWLPILTKRIDDNMPRVRLLDRYVSGDAPLPEQSKNTKASWKAFQKMSRTNWGM CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCE LIRDSVSDRIVPNGITVDGSADSETAKQAQRIYRDNRMDAVVRQWLDYGLTFRDSYLTCW EEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCEEEEE QGNDGQAIITADSPETMYAAVDPLQPWRVRAAIRYWRDIDEEKDFAFVWVNGARQKFSRP ECCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHCCC CYVQNINSKRLMTRISGGWEPETDLIETDGAPPVVVYTNPGGAGVFETHIDLINRINSGV CEEECCCHHHHHHHHCCCCCCCCCEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH LQRLSTMAMQAFRQRALKKEGDKPLPAVDDKGNAIDYAAIFEPAPGALWDLPPGVDIWES HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHCC ATTDASPMLAASKEDIRHLSAATKTPLPMLMPDGANQTAEGAMNTEKGFIFKCEACLAVV CCCCCCCHHHCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHH KLGLEAIIVKALETEGVADVGNVEVSFEAPARVTLSEKYSAAAQAAAAGEPWGSIARNIL HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHH KYSPDQIAQVEKDRAKEEAMAPQVAPPAPQDFPQ HCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure ASTPEEWLPILTKRIDDNMPRVRLLDRYVSGDAPLPEQSKNTKASWKAFQKMSRTNWGM CCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCE LIRDSVSDRIVPNGITVDGSADSETAKQAQRIYRDNRMDAVVRQWLDYGLTFRDSYLTCW EEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCEEEEE QGNDGQAIITADSPETMYAAVDPLQPWRVRAAIRYWRDIDEEKDFAFVWVNGARQKFSRP ECCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHCCC CYVQNINSKRLMTRISGGWEPETDLIETDGAPPVVVYTNPGGAGVFETHIDLINRINSGV CEEECCCHHHHHHHHCCCCCCCCCEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH LQRLSTMAMQAFRQRALKKEGDKPLPAVDDKGNAIDYAAIFEPAPGALWDLPPGVDIWES HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHCC ATTDASPMLAASKEDIRHLSAATKTPLPMLMPDGANQTAEGAMNTEKGFIFKCEACLAVV CCCCCCCHHHCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHH KLGLEAIIVKALETEGVADVGNVEVSFEAPARVTLSEKYSAAAQAAAAGEPWGSIARNIL HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHH KYSPDQIAQVEKDRAKEEAMAPQVAPPAPQDFPQ HCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA