Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628874
Identifier: 169628874
GI number: 169628874
Start: 1786635
End: 1788287
Strand: Direct
Name: 169628874
Synonym: MAB_1785
Alternate gene names: NA
Gene position: 1786635-1788287 (Clockwise)
Preceding gene: 169628873
Following gene: 169628875
Centisome position: 35.26
GC content: 61.77
Gene sequence:
>1653_bases ATGGCGGTTCTGATTGTTCCGCCGCTCGACCTGTCCTACCCGACATTGGGGCCGCAGGTCTGCCAGTTCATCGAAGAGCG GATGGTGTTCGGCCCCGGATCCCTATCGGGGCAGCCGGCACGCCTCGATGACGAGAAGCGCGGCATCATCTACCGCCTCT ACGAGATCTACCCGCAAGGGCACCGGCTTGCGGGGCGGCGCAGGTTTCAGCGTGGAGCCATTGAGGTCCGTAAGGGGCTG GCGAAAACCGAGCTCGCCGCTTGGATATCGGGTTGCGAGCTGCACCCCGAGGCTCCGGTTCGGTGCGACGGGTTCGACGC CAGCGGCAATCCGGTCGGCCGGCCCGTGGAGTCGCCCGTCATTCCGATGATGGCGGTCACCGAGGAGCAGGTGGAAGAGC TCGCGTACGGCGTGCTCAAGTATGTGCTCGAAAATGGGCCTGACGCGGAACTGTTCGTGATCACTAAAGAGAAGATCATC CGAAAGGGCTGGAACGGAACCGAAGACGGCTTTGTCGTCGCGGTATCCAACGCCCCCGGATCCCGAGACGGTGCACGAAC CACCTTCCAGCACTTCGATGAACCACACCGATTGTTCATGCAGCGGATGCGGGACGCGCACGAAACGATGCTCCAGAACA TGCCGAAGCGGCCCCTCGAGGATCCGTGGACGCTGTACACCTCCACCGCGGGCCAGCCGGGGCAGAACAGCATCGAAGAG GATGTTCTCGCCGAAGCGGAAGCTATCGACAAAGGTGAGGTTGACGACCCCAGCCTGTTCTTCTTCCGCCGATGGGCCGG CGACGAGCACCGCGACCTATCCACTGTGGAGAACCGGATCGCAGCCGTCGCAGACGCCACCGGCCCCGTAGGGGAGTGGG GCGTCGGCCAGTTTGAGCGGATCGCAAAGGACTACGACCGCAAGGGCATCGACAAAGCCTACTGGGAACGGGTGTGGCTG AATCGGTGGCGCAAATCTGGCTACCAAGCGTTCGACATGCTCAAAGTCGAATCCCTGCGCTTCGAGGACGAAGACAAACC GTGGGGTCCGATACCGGACGCCGCGTTCGTCACCGCAGGGTTTGACGGCGCGAGGTTCCGTGACGCCACTGCACTCACCA TCACGGATATCGAGACCGGACGGCAGATGCTTTTGGGCTGCTGGGAGCGCCCTGAAAACGCTGAGGACTGGGAAATCCCA GAGGATGAGGTCACGGACCTAGTCACGGACATGATGTCCCGGTATGAGGTGTGGCGCATGTACTGCGACCCGCCCCACTG GACAGAAACCGTTGCTTCATGGGCGGCCCGATTCCCCGATCAAGTTGTCGAGTGGTTCACCCAACGCAAAACGCCTATGG CCGCCGCGGTTAGGGCGTATGTCGAGGCTATCGATTCCGGGATTGTCACTTATGGCGAAAACGCCTGGCAAGAGACGCTG ATCAAGCATATGGGAAACGCTGGCAGACACGAGTTGAAGCTCCTTGACGACCAGGGAGCGCCGCTGTGGATCCTCCAGAA GCAAGACGGGCGCCTCGAGGACAAGTTCGACGCAGCAATGTCCGCGGTCCTGTCCTGGACAGCCTGTGTCGATGCTCGAC GATCCGGGGCTAAGCCGCGGCCGAAATCTTATGTGCCGAGGCGCATCTACTAA
Upstream 100 bases:
>100_bases TCGAAGGCAAAGGGACAGAAGCGCCGCGGCGTCCCCAACCCCGCCCCGATGCCAGAACCCGACTCCGATCCGCGGCTCAA GCTAGTCCAATAGTCCCGCC
Downstream 100 bases:
>100_bases ATGACAGAAGGGAGTCCCATGGCGTCTACACCAGAAGAATGGCTCCCCATCCTGACCAAGCGCATCGACGACAACATGCC GCGAGTCCGGCTCCTGGACC
Product: bacteriophage protein
Products: NA
Alternate protein names: Terminase; Phage Terminase-Like Large Subunit Protein; Bacteriophage Protein; Phage Terminase Protein Large Subunit-Like Protein
Number of amino acids: Translated: 550; Mature: 549
Protein sequence:
>550_residues MAVLIVPPLDLSYPTLGPQVCQFIEERMVFGPGSLSGQPARLDDEKRGIIYRLYEIYPQGHRLAGRRRFQRGAIEVRKGL AKTELAAWISGCELHPEAPVRCDGFDASGNPVGRPVESPVIPMMAVTEEQVEELAYGVLKYVLENGPDAELFVITKEKII RKGWNGTEDGFVVAVSNAPGSRDGARTTFQHFDEPHRLFMQRMRDAHETMLQNMPKRPLEDPWTLYTSTAGQPGQNSIEE DVLAEAEAIDKGEVDDPSLFFFRRWAGDEHRDLSTVENRIAAVADATGPVGEWGVGQFERIAKDYDRKGIDKAYWERVWL NRWRKSGYQAFDMLKVESLRFEDEDKPWGPIPDAAFVTAGFDGARFRDATALTITDIETGRQMLLGCWERPENAEDWEIP EDEVTDLVTDMMSRYEVWRMYCDPPHWTETVASWAARFPDQVVEWFTQRKTPMAAAVRAYVEAIDSGIVTYGENAWQETL IKHMGNAGRHELKLLDDQGAPLWILQKQDGRLEDKFDAAMSAVLSWTACVDARRSGAKPRPKSYVPRRIY
Sequences:
>Translated_550_residues MAVLIVPPLDLSYPTLGPQVCQFIEERMVFGPGSLSGQPARLDDEKRGIIYRLYEIYPQGHRLAGRRRFQRGAIEVRKGL AKTELAAWISGCELHPEAPVRCDGFDASGNPVGRPVESPVIPMMAVTEEQVEELAYGVLKYVLENGPDAELFVITKEKII RKGWNGTEDGFVVAVSNAPGSRDGARTTFQHFDEPHRLFMQRMRDAHETMLQNMPKRPLEDPWTLYTSTAGQPGQNSIEE DVLAEAEAIDKGEVDDPSLFFFRRWAGDEHRDLSTVENRIAAVADATGPVGEWGVGQFERIAKDYDRKGIDKAYWERVWL NRWRKSGYQAFDMLKVESLRFEDEDKPWGPIPDAAFVTAGFDGARFRDATALTITDIETGRQMLLGCWERPENAEDWEIP EDEVTDLVTDMMSRYEVWRMYCDPPHWTETVASWAARFPDQVVEWFTQRKTPMAAAVRAYVEAIDSGIVTYGENAWQETL IKHMGNAGRHELKLLDDQGAPLWILQKQDGRLEDKFDAAMSAVLSWTACVDARRSGAKPRPKSYVPRRIY >Mature_549_residues AVLIVPPLDLSYPTLGPQVCQFIEERMVFGPGSLSGQPARLDDEKRGIIYRLYEIYPQGHRLAGRRRFQRGAIEVRKGLA KTELAAWISGCELHPEAPVRCDGFDASGNPVGRPVESPVIPMMAVTEEQVEELAYGVLKYVLENGPDAELFVITKEKIIR KGWNGTEDGFVVAVSNAPGSRDGARTTFQHFDEPHRLFMQRMRDAHETMLQNMPKRPLEDPWTLYTSTAGQPGQNSIEED VLAEAEAIDKGEVDDPSLFFFRRWAGDEHRDLSTVENRIAAVADATGPVGEWGVGQFERIAKDYDRKGIDKAYWERVWLN RWRKSGYQAFDMLKVESLRFEDEDKPWGPIPDAAFVTAGFDGARFRDATALTITDIETGRQMLLGCWERPENAEDWEIPE DEVTDLVTDMMSRYEVWRMYCDPPHWTETVASWAARFPDQVVEWFTQRKTPMAAAVRAYVEAIDSGIVTYGENAWQETLI KHMGNAGRHELKLLDDQGAPLWILQKQDGRLEDKFDAAMSAVLSWTACVDARRSGAKPRPKSYVPRRIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62439; Mature: 62308
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLIVPPLDLSYPTLGPQVCQFIEERMVFGPGSLSGQPARLDDEKRGIIYRLYEIYPQG CEEEEECCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCC HRLAGRRRFQRGAIEVRKGLAKTELAAWISGCELHPEAPVRCDGFDASGNPVGRPVESPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCC IPMMAVTEEQVEELAYGVLKYVLENGPDAELFVITKEKIIRKGWNGTEDGFVVAVSNAPG CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCCCCCCCCEEEEECCCCC SRDGARTTFQHFDEPHRLFMQRMRDAHETMLQNMPKRPLEDPWTLYTSTAGQPGQNSIEE CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHH DVLAEAEAIDKGEVDDPSLFFFRRWAGDEHRDLSTVENRIAAVADATGPVGEWGVGQFER HHHHHHHHCCCCCCCCCHHEEEEHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH IAKDYDRKGIDKAYWERVWLNRWRKSGYQAFDMLKVESLRFEDEDKPWGPIPDAAFVTAG HHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECC FDGARFRDATALTITDIETGRQMLLGCWERPENAEDWEIPEDEVTDLVTDMMSRYEVWRM CCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YCDPPHWTETVASWAARFPDQVVEWFTQRKTPMAAAVRAYVEAIDSGIVTYGENAWQETL CCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHH IKHMGNAGRHELKLLDDQGAPLWILQKQDGRLEDKFDAAMSAVLSWTACVDARRSGAKPR HHHCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC PKSYVPRRIY CCCCCCCCCC >Mature Secondary Structure AVLIVPPLDLSYPTLGPQVCQFIEERMVFGPGSLSGQPARLDDEKRGIIYRLYEIYPQG EEEEECCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCC HRLAGRRRFQRGAIEVRKGLAKTELAAWISGCELHPEAPVRCDGFDASGNPVGRPVESPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCC IPMMAVTEEQVEELAYGVLKYVLENGPDAELFVITKEKIIRKGWNGTEDGFVVAVSNAPG CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCCCCCCCCEEEEECCCCC SRDGARTTFQHFDEPHRLFMQRMRDAHETMLQNMPKRPLEDPWTLYTSTAGQPGQNSIEE CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHH DVLAEAEAIDKGEVDDPSLFFFRRWAGDEHRDLSTVENRIAAVADATGPVGEWGVGQFER HHHHHHHHCCCCCCCCCHHEEEEHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH IAKDYDRKGIDKAYWERVWLNRWRKSGYQAFDMLKVESLRFEDEDKPWGPIPDAAFVTAG HHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECC FDGARFRDATALTITDIETGRQMLLGCWERPENAEDWEIPEDEVTDLVTDMMSRYEVWRM CCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YCDPPHWTETVASWAARFPDQVVEWFTQRKTPMAAAVRAYVEAIDSGIVTYGENAWQETL CCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHH IKHMGNAGRHELKLLDDQGAPLWILQKQDGRLEDKFDAAMSAVLSWTACVDARRSGAKPR HHHCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC PKSYVPRRIY CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA