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The map label for this gene is 169627396

Identifier: 169627396

GI number: 169627396

Start: 291987

End: 293840

Strand: Direct

Name: 169627396

Synonym: MAB_0291

Alternate gene names: NA

Gene position: 291987-293840 (Clockwise)

Preceding gene: 169627395

Following gene: 169627398

Centisome position: 5.76

GC content: 63.11

Gene sequence:

>1854_bases
TTGACTGACATTCAGGTGGGCGGGGCGCGCGAGGGGGTTCCCAGCGCGGGCCCCTCAGCGCTATCCGTGCTGCGGCTACT
CGCGTCGGGGACGGCTCCCGACGTGTTCGAGGCCCGTCTGAAGGAAATGGCACGGGAATCCTCGCCGCCGTGGAGCGCCG
CCGACCTGCACCGTGCCCGCGGATACGCTGAGCGCATTTATGGTCTCATCGAAGGGCAAAACCAGCGCGAGGCGCGTCTT
TCCAACCTGGTCGGCATCGGCATCGACTTACTCGGCTGCCACGGCCTCGACGAGGCGTCCACGACATTGGTCAAACGCGC
ACGGATCATGCTCGACGCCGATTTCTCGTTCATCTCGGTGCGCGATGATTCGGAGCCGGAGACGCGGCATCACGTCCGGT
ACGTCGATGGGCCCACGACCGCGATAAACCACGGGCTCTACTTCCCGATCGGTGACGACGTCGGGCTGGTCAGTTTGTAC
CGGCCGGGGCAAGGGCCGGTCTGGACAGCGGATTACCCGTCCGACACCAGGTTCAGCCGTGCCAGCGATGGTGATGCCGC
CATGCGTTCGGAGGGCGTACACAGCTTGATGGTTATGCCGATGGAGCATGAGGATCAGCACTTCGGCAACCTGTACGTTG
GATCACGCACGGTGCGCAGCTTCAGCGCCGCCGAGCGGTCCTTGTTTGCGAGCCTGTGTTCGTTCGCGGGCATCGCACTG
GCACGGGCCAGCGAATTCTCCAGTAACACAGAACAAATCAGCGCTCTGGAGCGTCGTCTTGAGCTGCGGTCCATACTTCT
GGATACCGGGGCCGGCCCGGGTGGCATGGACGGCTTCGTACTCACCGCAGGCGAACAGCTCGGCGTCGCGATGCGTGTGA
CCGGGCACGATGGATCCGAGATCGCCTCCTACAAATGGGAGCCTGACACACAGAATATCCTGACCACTGCCTTGACCGTG
GGCGACGACTATCACGGCGAGCTATCCGTGGCCAGTCTCGACGACCAGCCAGTTTCGGTGTACCCATTGAAGATTGAGGA
TCTTGCCACTACTGCCGCGGTGGTCATGTGCGGTGACAACCGGATGTCGCTGTCGGTCTCGCAGCTGCGTAACGACCTGC
TGCATGACGTGTTGGACTACCGCCAGCGCGACAGCCGATTGGTTCAGATATACGCCCGGCGTTTGGCTTTGGATCTCAAC
CAACCACATGTCGTGGTCATCGTGAGGCCAGAACGCGGGGGGCTGGATCGTGCGTCGCTGTGGTCGGCGTCATTCGCCTC
ACGGGTGGGCGGGCTGCGGGCCACTCAGGACGAGGTGGTGGTGCTGCTCATCCCGGGATCGGACGCGGGGCGCATCGCTC
AGACAGTGTGGGACGAAACCACCGCACATCTGCGGATGCCGGTCACGGTGTCTTCCGCCGGACCGTCGGAACGGATCGAG
TCCATCGAGGACACCTATCAGGACGCGATGCGTTGTCTGGATGCGATGAGTGCACTGGGTGCACTCGGAACAGCGGCTGC
TGCACATGAACTCGGCTTCTTGGGGGTGCTGTTATCGCGCCACCAGGATGTGGAGGGTTTTGTGAGATCGATGGTCGGGC
CCGTCATCGATTACGACGAGGACCGCGACACCGATCTGCTTCAGACACTCGACGTGTACTTCTCCGTCGGCGCCAGCCCC
ACCCGGGCAGCGAAGATCCTGCACACACACCCCAACACGGTGGTGCGCCGTCTTGACCGGGTGAACGAACTACTGGGTGA
CGGGTGGCAGGACGCCGAGCGCCTCTTGGACACGCAGCTCGCCATCAAGCTGTGGAAAGTGAGAGGCTCGCTGCTCACTC
GCCAGACCGGGTGA

Upstream 100 bases:

>100_bases
CGGGTTGATTCTTTGCGAACTGTTCGCGCGTAAGAGTCTTGACGGTGCCTTACCCCGCCCTTAGCGTTGCCACGCACACA
CGGCAGACGGGTAGTTGGTA

Downstream 100 bases:

>100_bases
CACCAGGCAGCCCACCGTCGCCGCGATGGACACCAGGGTGGAGTGCCGATGCCACCCGGTGAACGACCGTCCCGCGAAGT
CCTGCATACCCATGCGATTG

Product: hypothetical protein

Products: NA

Alternate protein names: Phytochrome Sensor Protein; Transcriptional Regulator CdaR; GAF Domain Protein; CdaR Family Transcriptional Regulator; Transcriptional Regulator PucR Family; PucR Family Transcriptional Regulator; Transcriptional Regulator CdaR Family

Number of amino acids: Translated: 617; Mature: 616

Protein sequence:

>617_residues
MTDIQVGGAREGVPSAGPSALSVLRLLASGTAPDVFEARLKEMARESSPPWSAADLHRARGYAERIYGLIEGQNQREARL
SNLVGIGIDLLGCHGLDEASTTLVKRARIMLDADFSFISVRDDSEPETRHHVRYVDGPTTAINHGLYFPIGDDVGLVSLY
RPGQGPVWTADYPSDTRFSRASDGDAAMRSEGVHSLMVMPMEHEDQHFGNLYVGSRTVRSFSAAERSLFASLCSFAGIAL
ARASEFSSNTEQISALERRLELRSILLDTGAGPGGMDGFVLTAGEQLGVAMRVTGHDGSEIASYKWEPDTQNILTTALTV
GDDYHGELSVASLDDQPVSVYPLKIEDLATTAAVVMCGDNRMSLSVSQLRNDLLHDVLDYRQRDSRLVQIYARRLALDLN
QPHVVVIVRPERGGLDRASLWSASFASRVGGLRATQDEVVVLLIPGSDAGRIAQTVWDETTAHLRMPVTVSSAGPSERIE
SIEDTYQDAMRCLDAMSALGALGTAAAAHELGFLGVLLSRHQDVEGFVRSMVGPVIDYDEDRDTDLLQTLDVYFSVGASP
TRAAKILHTHPNTVVRRLDRVNELLGDGWQDAERLLDTQLAIKLWKVRGSLLTRQTG

Sequences:

>Translated_617_residues
MTDIQVGGAREGVPSAGPSALSVLRLLASGTAPDVFEARLKEMARESSPPWSAADLHRARGYAERIYGLIEGQNQREARL
SNLVGIGIDLLGCHGLDEASTTLVKRARIMLDADFSFISVRDDSEPETRHHVRYVDGPTTAINHGLYFPIGDDVGLVSLY
RPGQGPVWTADYPSDTRFSRASDGDAAMRSEGVHSLMVMPMEHEDQHFGNLYVGSRTVRSFSAAERSLFASLCSFAGIAL
ARASEFSSNTEQISALERRLELRSILLDTGAGPGGMDGFVLTAGEQLGVAMRVTGHDGSEIASYKWEPDTQNILTTALTV
GDDYHGELSVASLDDQPVSVYPLKIEDLATTAAVVMCGDNRMSLSVSQLRNDLLHDVLDYRQRDSRLVQIYARRLALDLN
QPHVVVIVRPERGGLDRASLWSASFASRVGGLRATQDEVVVLLIPGSDAGRIAQTVWDETTAHLRMPVTVSSAGPSERIE
SIEDTYQDAMRCLDAMSALGALGTAAAAHELGFLGVLLSRHQDVEGFVRSMVGPVIDYDEDRDTDLLQTLDVYFSVGASP
TRAAKILHTHPNTVVRRLDRVNELLGDGWQDAERLLDTQLAIKLWKVRGSLLTRQTG
>Mature_616_residues
TDIQVGGAREGVPSAGPSALSVLRLLASGTAPDVFEARLKEMARESSPPWSAADLHRARGYAERIYGLIEGQNQREARLS
NLVGIGIDLLGCHGLDEASTTLVKRARIMLDADFSFISVRDDSEPETRHHVRYVDGPTTAINHGLYFPIGDDVGLVSLYR
PGQGPVWTADYPSDTRFSRASDGDAAMRSEGVHSLMVMPMEHEDQHFGNLYVGSRTVRSFSAAERSLFASLCSFAGIALA
RASEFSSNTEQISALERRLELRSILLDTGAGPGGMDGFVLTAGEQLGVAMRVTGHDGSEIASYKWEPDTQNILTTALTVG
DDYHGELSVASLDDQPVSVYPLKIEDLATTAAVVMCGDNRMSLSVSQLRNDLLHDVLDYRQRDSRLVQIYARRLALDLNQ
PHVVVIVRPERGGLDRASLWSASFASRVGGLRATQDEVVVLLIPGSDAGRIAQTVWDETTAHLRMPVTVSSAGPSERIES
IEDTYQDAMRCLDAMSALGALGTAAAAHELGFLGVLLSRHQDVEGFVRSMVGPVIDYDEDRDTDLLQTLDVYFSVGASPT
RAAKILHTHPNTVVRRLDRVNELLGDGWQDAERLLDTQLAIKLWKVRGSLLTRQTG

Specific function: Unknown

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67165; Mature: 67034

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDIQVGGAREGVPSAGPSALSVLRLLASGTAPDVFEARLKEMARESSPPWSAADLHRAR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
GYAERIYGLIEGQNQREARLSNLVGIGIDLLGCHGLDEASTTLVKRARIMLDADFSFISV
HHHHHHHHHHCCCCHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHEEECCCEEEEE
RDDSEPETRHHVRYVDGPTTAINHGLYFPIGDDVGLVSLYRPGQGPVWTADYPSDTRFSR
CCCCCCCCHHCEEEECCCCHHHCCCEEEECCCCCCEEEEEECCCCCEEECCCCCCCCCCC
ASDGDAAMRSEGVHSLMVMPMEHEDQHFGNLYVGSRTVRSFSAAERSLFASLCSFAGIAL
CCCCCHHHHHCCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
ARASEFSSNTEQISALERRLELRSILLDTGAGPGGMDGFVLTAGEQLGVAMRVTGHDGSE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEECCCCCC
IASYKWEPDTQNILTTALTVGDDYHGELSVASLDDQPVSVYPLKIEDLATTAAVVMCGDN
CCCEECCCCHHHHHHHHEEECCCCCCCEEEEECCCCCCEEEEEEHHHHHCEEEEEEECCC
RMSLSVSQLRNDLLHDVLDYRQRDSRLVQIYARRLALDLNQPHVVVIVRPERGGLDRASL
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCHHHH
WSASFASRVGGLRATQDEVVVLLIPGSDAGRIAQTVWDETTAHLRMPVTVSSAGPSERIE
HHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEEEECCCCCHHHHH
SIEDTYQDAMRCLDAMSALGALGTAAAAHELGFLGVLLSRHQDVEGFVRSMVGPVIDYDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
DRDTDLLQTLDVYFSVGASPTRAAKILHTHPNTVVRRLDRVNELLGDGWQDAERLLDTQL
CCCHHHHHHHHHHHCCCCCHHHHHHEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AIKLWKVRGSLLTRQTG
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TDIQVGGAREGVPSAGPSALSVLRLLASGTAPDVFEARLKEMARESSPPWSAADLHRAR
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
GYAERIYGLIEGQNQREARLSNLVGIGIDLLGCHGLDEASTTLVKRARIMLDADFSFISV
HHHHHHHHHHCCCCHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHEEECCCEEEEE
RDDSEPETRHHVRYVDGPTTAINHGLYFPIGDDVGLVSLYRPGQGPVWTADYPSDTRFSR
CCCCCCCCHHCEEEECCCCHHHCCCEEEECCCCCCEEEEEECCCCCEEECCCCCCCCCCC
ASDGDAAMRSEGVHSLMVMPMEHEDQHFGNLYVGSRTVRSFSAAERSLFASLCSFAGIAL
CCCCCHHHHHCCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
ARASEFSSNTEQISALERRLELRSILLDTGAGPGGMDGFVLTAGEQLGVAMRVTGHDGSE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEECCCCCC
IASYKWEPDTQNILTTALTVGDDYHGELSVASLDDQPVSVYPLKIEDLATTAAVVMCGDN
CCCEECCCCHHHHHHHHEEECCCCCCCEEEEECCCCCCEEEEEEHHHHHCEEEEEEECCC
RMSLSVSQLRNDLLHDVLDYRQRDSRLVQIYARRLALDLNQPHVVVIVRPERGGLDRASL
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCHHHH
WSASFASRVGGLRATQDEVVVLLIPGSDAGRIAQTVWDETTAHLRMPVTVSSAGPSERIE
HHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEEEECCCCCHHHHH
SIEDTYQDAMRCLDAMSALGALGTAAAAHELGFLGVLLSRHQDVEGFVRSMVGPVIDYDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
DRDTDLLQTLDVYFSVGASPTRAAKILHTHPNTVVRRLDRVNELLGDGWQDAERLLDTQL
CCCHHHHHHHHHHHCCCCCHHHHHHEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AIKLWKVRGSLLTRQTG
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA