Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
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Accession | NC_003197 |
Length | 4,857,432 |
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The map label for this gene is bax [H]
Identifier: 16766948
GI number: 16766948
Start: 3849391
End: 3850215
Strand: Reverse
Name: bax [H]
Synonym: STM3663
Alternate gene names: 16766948
Gene position: 3850215-3849391 (Counterclockwise)
Preceding gene: 16766951
Following gene: 16766946
Centisome position: 79.26
GC content: 52.24
Gene sequence:
>825_bases ATGATATTGACTCCCATGCGACGATATGGGGCAATGATTCTTATGTTACTCACCATCGCATTTTCGGGTGAGGTGCTGGC AAAGACGCACGCAACACAAACGAGTCAAAAGTCCCACATAACTGAGACAAGTTATAAACAGGTTAGCAGTAAACAAGAGT ATTCTCGCAATAGTGCAAAGAGCAGTTCACTTCCTGATTTGCGAAAATACCCTTCCGGAACCCCCAGAAAAAAAGCGTTT CTCCGGACCGTTATGCCTTACATCACCAGCCAAAATGCCGCGATTACCGCGGACCGTAATTGGCTGATCTCAAAACAGTA CCAGAACCGCTGGTCGCCGTCTGAACGCGCGCGTATGAAAGATATCGCGAAGCGCTATAAAGTGAGCTGGTCCGGCAACA CGCGTCGTATTCCGTGGAATACGTTGCTGGAGCGCGTCGACATTATCCCAACCAGCATGGTGGCGACGATGGCGGCGGCG GAAAGCGGCTGGGGAACCTCTAAACTGGCGCGTAGCAACAATAACCTGTTCGGCATGAAGTGCACGAAAGGGCGTTGTAC CAATACGCCGGGTAAGGTGAAAGGTTACTCGCAATTCGCGTCGGTTGAGGAGTCGGTGAGCGCGTATGTCGCCAACCTGA ACACGCATCCGGCTTATTCTTCTTTCCGCAAGTCGCGCGCCCAACTGCGTAAGGCGGATCAGGAAGTCACCGCCACGGCG ATGATTCATAAGCTGAAGGGTTACTCTACCCAGGGGTCGCGCTATAACAACTACTTGTTCGCGATGTACCAGGACAACCA GCGTCTGATCGCCGCGCATATGTAA
Upstream 100 bases:
>100_bases GGTGCTTTTTAAGCCTATTTTTGCTAGAATTTGGGGTTCAAACCTCAACTTCGTGAAAAATAAAAGGTGTTGGAATGTAT CAATCCGACCAGGAGACCTA
Downstream 100 bases:
>100_bases TTCTGTGTGCCGGATGGCGCTACGCTATCCGGCTTACAAGGCATCTGTAGGCTGGATAAACTACAACAACGCTTCACTAT GCTGGTCGCGATACTCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MILTPMRRYGAMILMLLTIAFSGEVLAKTHATQTSQKSHITETSYKQVSSKQEYSRNSAKSSSLPDLRKYPSGTPRKKAF LRTVMPYITSQNAAITADRNWLISKQYQNRWSPSERARMKDIAKRYKVSWSGNTRRIPWNTLLERVDIIPTSMVATMAAA ESGWGTSKLARSNNNLFGMKCTKGRCTNTPGKVKGYSQFASVEESVSAYVANLNTHPAYSSFRKSRAQLRKADQEVTATA MIHKLKGYSTQGSRYNNYLFAMYQDNQRLIAAHM
Sequences:
>Translated_274_residues MILTPMRRYGAMILMLLTIAFSGEVLAKTHATQTSQKSHITETSYKQVSSKQEYSRNSAKSSSLPDLRKYPSGTPRKKAF LRTVMPYITSQNAAITADRNWLISKQYQNRWSPSERARMKDIAKRYKVSWSGNTRRIPWNTLLERVDIIPTSMVATMAAA ESGWGTSKLARSNNNLFGMKCTKGRCTNTPGKVKGYSQFASVEESVSAYVANLNTHPAYSSFRKSRAQLRKADQEVTATA MIHKLKGYSTQGSRYNNYLFAMYQDNQRLIAAHM >Mature_274_residues MILTPMRRYGAMILMLLTIAFSGEVLAKTHATQTSQKSHITETSYKQVSSKQEYSRNSAKSSSLPDLRKYPSGTPRKKAF LRTVMPYITSQNAAITADRNWLISKQYQNRWSPSERARMKDIAKRYKVSWSGNTRRIPWNTLLERVDIIPTSMVATMAAA ESGWGTSKLARSNNNLFGMKCTKGRCTNTPGKVKGYSQFASVEESVSAYVANLNTHPAYSSFRKSRAQLRKADQEVTATA MIHKLKGYSTQGSRYNNYLFAMYQDNQRLIAAHM
Specific function: Unknown
COG id: COG2992
COG function: function code R; Uncharacterized FlgJ-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994948, Length=274, Percent_Identity=90.1459854014599, Blast_Score=522, Evalue=1e-150,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002901 [H]
Pfam domain/function: PF01832 Glucosaminidase [H]
EC number: NA
Molecular weight: Translated: 30983; Mature: 30983
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTPMRRYGAMILMLLTIAFSGEVLAKTHATQTSQKSHITETSYKQVSSKQEYSRNSAK CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHCCC SSSLPDLRKYPSGTPRKKAFLRTVMPYITSQNAAITADRNWLISKQYQNRWSPSERARMK CCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCEEEEHHHHCCCCHHHHHHHH DIAKRYKVSWSGNTRRIPWNTLLERVDIIPTSMVATMAAAESGWGTSKLARSNNNLFGMK HHHHHHEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEE CTKGRCTNTPGKVKGYSQFASVEESVSAYVANLNTHPAYSSFRKSRAQLRKADQEVTATA ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH MIHKLKGYSTQGSRYNNYLFAMYQDNQRLIAAHM HHHHHCCCCCCCCCCCCEEEEEEECCCEEEEECC >Mature Secondary Structure MILTPMRRYGAMILMLLTIAFSGEVLAKTHATQTSQKSHITETSYKQVSSKQEYSRNSAK CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHCCC SSSLPDLRKYPSGTPRKKAFLRTVMPYITSQNAAITADRNWLISKQYQNRWSPSERARMK CCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCEEEEHHHHCCCCHHHHHHHH DIAKRYKVSWSGNTRRIPWNTLLERVDIIPTSMVATMAAAESGWGTSKLARSNNNLFGMK HHHHHHEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEE CTKGRCTNTPGKVKGYSQFASVEESVSAYVANLNTHPAYSSFRKSRAQLRKADQEVTATA ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH MIHKLKGYSTQGSRYNNYLFAMYQDNQRLIAAHM HHHHHCCCCCCCCCCCCEEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503; 1544897 [H]