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The map label for this gene is orgA

Identifier: 16766176

GI number: 16766176

Start: 3014425

End: 3015024

Strand: Reverse

Name: orgA

Synonym: STM2870

Alternate gene names: 16766176

Gene position: 3015024-3014425 (Counterclockwise)

Preceding gene: 16766177

Following gene: 16766175

Centisome position: 62.07

GC content: 47.83

Gene sequence:

>600_bases
ATGATAAGGCGAAATCGTCAAATGAATAGGCAGCCATTACCCATTATCTGGCAAAGAATCATTTTTGATCCGTTATCGTA
TATCCATCCTCAGCGGTTGCAGATAGCGCCGGAAATGATTGTCAGACCCGCCGCCAGGGCGGCGGCAAATGAGTTAATAC
TGGCGGCATGGCGGCTTAAGAACGGAGAAAAGGAGTGTATTCAAAACTCACTGACGCAGCTGTGGCTGCGTCAGTGGCGC
CGACTGCCGCAAGTAGCGTATTTACTCGGTTGCCATAAACTGAGAGCCGATCTGGCAAGGCAGGGAGCCTTGCTTGGCCT
GCCGGATTGGGCGCAAGCATTTTTGGCAATGCATCAGGGAACAAGTTTATCTGTCTGCAATAAGGCGCCGAATCACCGGT
TTTTACTTAGCGTCGGGTATGCACAGTTAAATGCCCTAAATGAATTTTTACCTGAATCTTTAGCACAGCGTTTTCCTTTG
CTTTTTCCTCCATTTATTGAGGAGGCATTGAAGCAGGATGCTGTAGAAATGTCAATTTTGCTACTGGCCTTACAATATGC
TCAAAAATATCCCAATACCGTCCCCGCTTTCGCCTGTTGA

Upstream 100 bases:

>100_bases
TGGATTGTTTTGATTATTTTGTTATCCGTGATGTCAGCAGGCTTTGGCGTCTGGTATTACAAAAACCATTATGCCCGCAA
TAAGAAAGGCATAACGGCTG

Downstream 100 bases:

>100_bases
GGGGATACTGATAAAGCGTAAAACGCTGGAACGTTATTTCTCTATTGAAAGATTAGAACAGCAGGCGCATCAACGGGCTA
AGCGTATTTTGCGAGAGGCG

Product: needle complex assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MIRRNRQMNRQPLPIIWQRIIFDPLSYIHPQRLQIAPEMIVRPAARAAANELILAAWRLKNGEKECIQNSLTQLWLRQWR
RLPQVAYLLGCHKLRADLARQGALLGLPDWAQAFLAMHQGTSLSVCNKAPNHRFLLSVGYAQLNALNEFLPESLAQRFPL
LFPPFIEEALKQDAVEMSILLLALQYAQKYPNTVPAFAC

Sequences:

>Translated_199_residues
MIRRNRQMNRQPLPIIWQRIIFDPLSYIHPQRLQIAPEMIVRPAARAAANELILAAWRLKNGEKECIQNSLTQLWLRQWR
RLPQVAYLLGCHKLRADLARQGALLGLPDWAQAFLAMHQGTSLSVCNKAPNHRFLLSVGYAQLNALNEFLPESLAQRFPL
LFPPFIEEALKQDAVEMSILLLALQYAQKYPNTVPAFAC
>Mature_199_residues
MIRRNRQMNRQPLPIIWQRIIFDPLSYIHPQRLQIAPEMIVRPAARAAANELILAAWRLKNGEKECIQNSLTQLWLRQWR
RLPQVAYLLGCHKLRADLARQGALLGLPDWAQAFLAMHQGTSLSVCNKAPNHRFLLSVGYAQLNALNEFLPESLAQRFPL
LFPPFIEEALKQDAVEMSILLLALQYAQKYPNTVPAFAC

Specific function: Oxygen-regulated protein required for bacterial internalization

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ORGA_SALTY (P58653)

Other databases:

- EMBL:   L33855
- EMBL:   AE006468
- EMBL:   U21676
- PIR:   S69789
- RefSeq:   NP_461791.1
- PRIDE:   P58653
- GeneID:   1254393
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM2870
- HOGENOM:   HBG685689
- OMA:   AAPMNPL
- ProtClustDB:   PRK15323
- BioCyc:   STYP99287:STM2870-MONOMER
- GO:   GO:0009405
- InterPro:   IPR013388
- TIGRFAMs:   TIGR02555

Pfam domain/function: PF09482 OrgA_MxiK

EC number: NA

Molecular weight: Translated: 22832; Mature: 22832

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRNRQMNRQPLPIIWQRIIFDPLSYIHPQRLQIAPEMIVRPAARAAANELILAAWRLK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC
NGEKECIQNSLTQLWLRQWRRLPQVAYLLGCHKLRADLARQGALLGLPDWAQAFLAMHQG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
TSLSVCNKAPNHRFLLSVGYAQLNALNEFLPESLAQRFPLLFPPFIEEALKQDAVEMSIL
CCEEHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LLALQYAQKYPNTVPAFAC
HHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIRRNRQMNRQPLPIIWQRIIFDPLSYIHPQRLQIAPEMIVRPAARAAANELILAAWRLK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC
NGEKECIQNSLTQLWLRQWRRLPQVAYLLGCHKLRADLARQGALLGLPDWAQAFLAMHQG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
TSLSVCNKAPNHRFLLSVGYAQLNALNEFLPESLAQRFPLLFPPFIEEALKQDAVEMSIL
CCEEHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LLALQYAQKYPNTVPAFAC
HHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8063389; 10816487; 11677609; 7476203