Click here to switch to the map view.

The map label for this gene is orgB

Identifier: 16766175

GI number: 16766175

Start: 3013788

End: 3014468

Strand: Reverse

Name: orgB

Synonym: STM2869

Alternate gene names: 16766175

Gene position: 3014468-3013788 (Counterclockwise)

Preceding gene: 16766176

Following gene: 16766174

Centisome position: 62.06

GC content: 45.08

Gene sequence:

>681_bases
ATGCTCAAAAATATCCCAATACCGTCCCCGCTTTCGCCTGTTGAGGGGATACTGATAAAGCGTAAAACGCTGGAACGTTA
TTTCTCTATTGAAAGATTAGAACAGCAGGCGCATCAACGGGCTAAGCGTATTTTGCGAGAGGCGGAAGAAGAGGCAAAGA
CCTTGCGGATGTACGCCTATCAGGAAGGTTACGAGCAGGGAATGATAGACGCGTTACAGCAGGTCGCCGCTTATCTTACT
GATAATCAGACAATGGCCTGGAAGTGGATGGAAAAAATACAGATTTATGCCCGCGAGTTATTTTCAGCTGCGGTCGACCA
TCCCGAAACGCTTTTAACCGTCCTGGATGAGTGGCTAAGGGATTTCGATAAGCCTGAGGGGCAACTTTTTTTAACACTGC
CAGTTAATGCGAAAAAAGATCACCAAAAACTGATGGTGTTGCTTATGGAGAACTGGCCAGGCACTTTTAATCTTAAATAT
CACCAGGAACAGCGCTTTATCATGAGTTGCGGCGATCAGATCGCAGAATTTTCACCTGAACAATTTGTTGAAACGGCAGT
AGGCGTCATTAAGCATCATCTTGATGAACTTCCACAAGACTGCCGGACAATTTCTGATAACGCCATTAACGCACTTATTG
ATGAATGGAAGACAAAAACGCAAGCGGAGGTTATAAGGTGA

Upstream 100 bases:

>100_bases
TCTTTAGCACAGCGTTTTCCTTTGCTTTTTCCTCCATTTATTGAGGAGGCATTGAAGCAGGATGCTGTAGAAATGTCAAT
TTTGCTACTGGCCTTACAAT

Downstream 100 bases:

>100_bases
TACCGGGTACGATTCCGACTTCTTATTTGGTCCCGACAGCAGATACTGAAGCGACGGGTGTGGTTTCGTTGAGTGCCAGG
GCCGCTATGCTGAATAATAT

Product: needle complex export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MLKNIPIPSPLSPVEGILIKRKTLERYFSIERLEQQAHQRAKRILREAEEEAKTLRMYAYQEGYEQGMIDALQQVAAYLT
DNQTMAWKWMEKIQIYARELFSAAVDHPETLLTVLDEWLRDFDKPEGQLFLTLPVNAKKDHQKLMVLLMENWPGTFNLKY
HQEQRFIMSCGDQIAEFSPEQFVETAVGVIKHHLDELPQDCRTISDNAINALIDEWKTKTQAEVIR

Sequences:

>Translated_226_residues
MLKNIPIPSPLSPVEGILIKRKTLERYFSIERLEQQAHQRAKRILREAEEEAKTLRMYAYQEGYEQGMIDALQQVAAYLT
DNQTMAWKWMEKIQIYARELFSAAVDHPETLLTVLDEWLRDFDKPEGQLFLTLPVNAKKDHQKLMVLLMENWPGTFNLKY
HQEQRFIMSCGDQIAEFSPEQFVETAVGVIKHHLDELPQDCRTISDNAINALIDEWKTKTQAEVIR
>Mature_226_residues
MLKNIPIPSPLSPVEGILIKRKTLERYFSIERLEQQAHQRAKRILREAEEEAKTLRMYAYQEGYEQGMIDALQQVAAYLT
DNQTMAWKWMEKIQIYARELFSAAVDHPETLLTVLDEWLRDFDKPEGQLFLTLPVNAKKDHQKLMVLLMENWPGTFNLKY
HQEQRFIMSCGDQIAEFSPEQFVETAVGVIKHHLDELPQDCRTISDNAINALIDEWKTKTQAEVIR

Specific function: Oxygen-regulated protein required for bacterial internalization

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ORGB_SALTY (P58654)

Other databases:

- EMBL:   L33855
- EMBL:   AE006468
- RefSeq:   NP_461790.1
- PRIDE:   P58654
- GeneID:   1254392
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM2869
- HOGENOM:   HBG415819
- OMA:   ENRETET
- ProtClustDB:   PRK15322
- BioCyc:   STYP99287:STM2869-MONOMER
- GO:   GO:0009405

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26463; Mature: 26463

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNIPIPSPLSPVEGILIKRKTLERYFSIERLEQQAHQRAKRILREAEEEAKTLRMYAY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEGYEQGMIDALQQVAAYLTDNQTMAWKWMEKIQIYARELFSAAVDHPETLLTVLDEWLR
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
DFDKPEGQLFLTLPVNAKKDHQKLMVLLMENWPGTFNLKYHQEQRFIMSCGDQIAEFSPE
HHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCHH
QFVETAVGVIKHHLDELPQDCRTISDNAINALIDEWKTKTQAEVIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKNIPIPSPLSPVEGILIKRKTLERYFSIERLEQQAHQRAKRILREAEEEAKTLRMYAY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEGYEQGMIDALQQVAAYLTDNQTMAWKWMEKIQIYARELFSAAVDHPETLLTVLDEWLR
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
DFDKPEGQLFLTLPVNAKKDHQKLMVLLMENWPGTFNLKYHQEQRFIMSCGDQIAEFSPE
HHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCHH
QFVETAVGVIKHHLDELPQDCRTISDNAINALIDEWKTKTQAEVIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8063389; 10816487; 11677609