| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16766041
Identifier: 16766041
GI number: 16766041
Start: 2870268
End: 2872697
Strand: Reverse
Name: 16766041
Synonym: STM2729
Alternate gene names: NA
Gene position: 2872697-2870268 (Counterclockwise)
Preceding gene: 16766042
Following gene: 16766040
Centisome position: 59.14
GC content: 56.3
Gene sequence:
>2430_bases GTGGCAGTGAGTAAATTCACATTACATAATGCACCAACCACCGGCGGTTCGAATGAGGCCGCCGTGGTCTTTCCATGGAA TACCCCAAAAAAAGCGGTTAACCCGTATCTGGACCCAGCGGAAGTTGCGCCGGAGTCTGCGCTTTCAAACCTGATCGCTC TTTACGCTGCGGATAACGAGCAGGAGCAGTTGCGCCGTGAGACGCTGAGCGATGAGGTCTGGGAACGCTATTTCTTCAAT GAATCCCGTGATCCTGTCCAGCGTGAAATAGAGCAGGATCGGCTGATTAGCCATGCCAAAACGGCGCGTGAGCAGCAACG TTTTAATCCCGATCTGGTCATTATTGCCGACGTGGGCGCCCAACCGGCGCATATCAGCAAGCCGCTACTTGAACGGATTA AATATTTCCATAGCCTGGGCAGAGCAAAAGCTTATTCCCGCTACCTGCGCGAAACAATCAGGCCGTGTCTTGAGCGGCTG GAGCGCGTGCGTGACAGCCAGGTGTCTGCGTCTTTCCGGTTCATGGCGAGCCACGACGGGCTGGAGGGGCTGCTGGTACT CCCTGAAATGAATCAGGATCAGGTCAAACGCCTATCCACGCTGGTTGCGGCACATATGAGCATGTGTCTTGATGCGGCCT GCGGTGATCTGTTTGTCAGTGACGATGTTAAACCAGAAGAAATCCGCCAGGCATGGGAAAGGGTTGCTGCAGAAGCCATG CGCCTTGAGGTCATTCCGCCAGCCTTTGAGCAGTTGCGCCGCAAAAAGCGCCGCCGTAAGCCGGTGCCTTATGAACTGAT CCCACCGTCGCTGGCCCGTATGCTGTGCGCGGACTGGTGGTGTCGCAAATTGTGGCAGATGCGCTGCGAGTGGCGGGAGG AGCAGTTGCGCGCCGTCTGCCTGGTCAACAAGAAAGCCTCACCGTATGTCAGCTACGAAGCCGTGATCCACAAACGCGAG CAGCGCCGCAAATCGCTGGAGTTCTTCCGCTCGCATGAGCTGATCAACGAAGACGGCGACACGCTGGACATGGAAGACGT GGTGAACGCCAGCAACAGCAACCCGGCGCACCGCCGTAATGAAATGATGGCCTGTGTTAAGGGGCTGGAGCTGATCGCGG AAATGCGCGGAGACTGCGCGGTGTTTTATACCATCACCTGCCCGTCACGCTTCCACGCAACTCTCAACAACGGCAGGCCT AATCCGAAGTGGACCAGTGCCACGGTCCGGCAGAGCAGTGACTATCTGGTTGATACATTCGCCGCTTTCCGCAAGGCCAT GCACAAGACCGGGCTGCGCTGGTACGGCGTCCGCGTTGCAGAGCCGCACCATGACGGCACCGTGCACTGGCATCTTCTGT GCTTTATGCGCAAAAAAGACCGTCGTTCCATCACCGCGCTGCTGCGTAAGTTTGCCATCCGTGAAGACCGCGAGGAGCTG GGCACCAATACCGGGCCGCGCTTCAAGTCCGAGCTAATCAACCCGCGCAAGGGCACGCCGACAAGCTACATCGCCAAATA CATCAGTAAGAACATCGACGGGCGCGGGCTGGCTAAAGAAATCAGCAAAGAAACCGGCAGACCACTGCGTGATAGCGCCG AGCATGTCAGCGCCTGGGCGTCGCTGCACCGTGTCCAGCAATTTCGTTTCTTTGGTATTCCGGGGCGTCAGGCATACCGC GAGCTGCGCTTGCTGGCAGGTCAGGCGGCGAGAGTACAAGGCGAACGCAAAGCGGGTGCGCCGGTACTGGATAATCCGCG TCTGGATGCGGTACTGGCAGCTGCGGATGCAGGTTGCTTTGCCACCTACATCATGAAACAGGGCGGTGTACTGGTTCCCC GCAAACATCACCTTGTCCGCACAGCTTATGAGCTTAACGACGAACCGAGCGCCTACGGCGATCACGGTATCCGTATCTAT GGCATCTGGTCCCCGATTGCAGAGGGCAAGATTTGCACGCACGCGATGAAGTGGAAAAAGGTTCGTAAGGCCGTTGACGT TCAGGAGGCGGCAGCCGACCAGGGCGCTTGCGCCCCTTGGACTCGTGGCAATAACTGTCCCCTTGCTGAAAATTTGAACC AACAGGAGAAAGATAAATCAGCTGATGGGGGCACCAGAACGGACATTACCCGCATGGATGACAAGGAATTGCACGATTAC CTGTACAGTATGAGCAAAAAAGATCGCCGGGAGCTGGCAGCAAGGTTGCGCCTGGTTAAACCGAAAAGGCGTAAAGACTA CAAACAGCGAATTACAGATCATCAGCATCAGCAGCTCGTCTATGAACTGAAGTCCAGAGGATTTGATGGCAGCGAGAAAG AAGTCGATTTGCTCCTTCGCGGTGGCAGTATTCCATCAGGAGCAGGCCTGCGTATCTTCTATCGGAACCAGCGTCTGAAG GAAGATGATAAGTGGCGGAACCAGTATTAA
Upstream 100 bases:
>100_bases GTAAAACTGCAGTAGAAATCATCGCCACAAAATCAGCATGCTGGTTTGGTGTTGATTTGGCGTCTGGTCCTGATATCTCG GTAGAAACTGAGGTGCGGGC
Downstream 100 bases:
>100_bases TTACGCGGGTTAACAATTCGTGCTCTTAATAATACCAGGCATATCAGGCTGATGAACGTAAAAAACGTTTTACATCAGTA AGATTATTATATACTGTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Fels-2 prophage protein
Number of amino acids: Translated: 809; Mature: 808
Protein sequence:
>809_residues MAVSKFTLHNAPTTGGSNEAAVVFPWNTPKKAVNPYLDPAEVAPESALSNLIALYAADNEQEQLRRETLSDEVWERYFFN ESRDPVQREIEQDRLISHAKTAREQQRFNPDLVIIADVGAQPAHISKPLLERIKYFHSLGRAKAYSRYLRETIRPCLERL ERVRDSQVSASFRFMASHDGLEGLLVLPEMNQDQVKRLSTLVAAHMSMCLDAACGDLFVSDDVKPEEIRQAWERVAAEAM RLEVIPPAFEQLRRKKRRRKPVPYELIPPSLARMLCADWWCRKLWQMRCEWREEQLRAVCLVNKKASPYVSYEAVIHKRE QRRKSLEFFRSHELINEDGDTLDMEDVVNASNSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSRFHATLNNGRP NPKWTSATVRQSSDYLVDTFAAFRKAMHKTGLRWYGVRVAEPHHDGTVHWHLLCFMRKKDRRSITALLRKFAIREDREEL GTNTGPRFKSELINPRKGTPTSYIAKYISKNIDGRGLAKEISKETGRPLRDSAEHVSAWASLHRVQQFRFFGIPGRQAYR ELRLLAGQAARVQGERKAGAPVLDNPRLDAVLAAADAGCFATYIMKQGGVLVPRKHHLVRTAYELNDEPSAYGDHGIRIY GIWSPIAEGKICTHAMKWKKVRKAVDVQEAAADQGACAPWTRGNNCPLAENLNQQEKDKSADGGTRTDITRMDDKELHDY LYSMSKKDRRELAARLRLVKPKRRKDYKQRITDHQHQQLVYELKSRGFDGSEKEVDLLLRGGSIPSGAGLRIFYRNQRLK EDDKWRNQY
Sequences:
>Translated_809_residues MAVSKFTLHNAPTTGGSNEAAVVFPWNTPKKAVNPYLDPAEVAPESALSNLIALYAADNEQEQLRRETLSDEVWERYFFN ESRDPVQREIEQDRLISHAKTAREQQRFNPDLVIIADVGAQPAHISKPLLERIKYFHSLGRAKAYSRYLRETIRPCLERL ERVRDSQVSASFRFMASHDGLEGLLVLPEMNQDQVKRLSTLVAAHMSMCLDAACGDLFVSDDVKPEEIRQAWERVAAEAM RLEVIPPAFEQLRRKKRRRKPVPYELIPPSLARMLCADWWCRKLWQMRCEWREEQLRAVCLVNKKASPYVSYEAVIHKRE QRRKSLEFFRSHELINEDGDTLDMEDVVNASNSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSRFHATLNNGRP NPKWTSATVRQSSDYLVDTFAAFRKAMHKTGLRWYGVRVAEPHHDGTVHWHLLCFMRKKDRRSITALLRKFAIREDREEL GTNTGPRFKSELINPRKGTPTSYIAKYISKNIDGRGLAKEISKETGRPLRDSAEHVSAWASLHRVQQFRFFGIPGRQAYR ELRLLAGQAARVQGERKAGAPVLDNPRLDAVLAAADAGCFATYIMKQGGVLVPRKHHLVRTAYELNDEPSAYGDHGIRIY GIWSPIAEGKICTHAMKWKKVRKAVDVQEAAADQGACAPWTRGNNCPLAENLNQQEKDKSADGGTRTDITRMDDKELHDY LYSMSKKDRRELAARLRLVKPKRRKDYKQRITDHQHQQLVYELKSRGFDGSEKEVDLLLRGGSIPSGAGLRIFYRNQRLK EDDKWRNQY >Mature_808_residues AVSKFTLHNAPTTGGSNEAAVVFPWNTPKKAVNPYLDPAEVAPESALSNLIALYAADNEQEQLRRETLSDEVWERYFFNE SRDPVQREIEQDRLISHAKTAREQQRFNPDLVIIADVGAQPAHISKPLLERIKYFHSLGRAKAYSRYLRETIRPCLERLE RVRDSQVSASFRFMASHDGLEGLLVLPEMNQDQVKRLSTLVAAHMSMCLDAACGDLFVSDDVKPEEIRQAWERVAAEAMR LEVIPPAFEQLRRKKRRRKPVPYELIPPSLARMLCADWWCRKLWQMRCEWREEQLRAVCLVNKKASPYVSYEAVIHKREQ RRKSLEFFRSHELINEDGDTLDMEDVVNASNSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSRFHATLNNGRPN PKWTSATVRQSSDYLVDTFAAFRKAMHKTGLRWYGVRVAEPHHDGTVHWHLLCFMRKKDRRSITALLRKFAIREDREELG TNTGPRFKSELINPRKGTPTSYIAKYISKNIDGRGLAKEISKETGRPLRDSAEHVSAWASLHRVQQFRFFGIPGRQAYRE LRLLAGQAARVQGERKAGAPVLDNPRLDAVLAAADAGCFATYIMKQGGVLVPRKHHLVRTAYELNDEPSAYGDHGIRIYG IWSPIAEGKICTHAMKWKKVRKAVDVQEAAADQGACAPWTRGNNCPLAENLNQQEKDKSADGGTRTDITRMDDKELHDYL YSMSKKDRRELAARLRLVKPKRRKDYKQRITDHQHQQLVYELKSRGFDGSEKEVDLLLRGGSIPSGAGLRIFYRNQRLKE DDKWRNQY
Specific function: Possible endonuclease which induces a single-strand cut and initiates DNA replication (Potential)
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phage GPA family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENDPH_SALTY (Q8ZMS4)
Other databases:
- EMBL: AE006468 - RefSeq: NP_461656.1 - GeneID: 1254252 - GenomeReviews: AE006468_GR - KEGG: stm:STM2729 - NMPDR: fig|99287.1.peg.2634 - HOGENOM: HBG470586 - OMA: GTRTDIT - ProtClustDB: CLSK894448 - BioCyc: STYP99287:STM2729-MONOMER - InterPro: IPR020220 - InterPro: IPR008766 - ProDom: PD092055
Pfam domain/function: PF05840 Phage_GPA
EC number: NA
Molecular weight: Translated: 92888; Mature: 92757
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: ACT_SITE 503-503 ACT_SITE 507-507
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSKFTLHNAPTTGGSNEAAVVFPWNTPKKAVNPYLDPAEVAPESALSNLIALYAADNE CCCCCEEECCCCCCCCCCCEEEEECCCCCHHHCCCCCCHHHCCHHHHHHHHHHHHCCCCH QEQLRRETLSDEVWERYFFNESRDPVQREIEQDRLISHAKTAREQQRFNPDLVIIADVGA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC QPAHISKPLLERIKYFHSLGRAKAYSRYLRETIRPCLERLERVRDSQVSASFRFMASHDG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC LEGLLVLPEMNQDQVKRLSTLVAAHMSMCLDAACGDLFVSDDVKPEEIRQAWERVAAEAM CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHH RLEVIPPAFEQLRRKKRRRKPVPYELIPPSLARMLCADWWCRKLWQMRCEWREEQLRAVC HEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVNKKASPYVSYEAVIHKREQRRKSLEFFRSHELINEDGDTLDMEDVVNASNSNPAHRRN EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHCCCCCCCHHHHH EMMACVKGLELIAEMRGDCAVFYTITCPSRFHATLNNGRPNPKWTSATVRQSSDYLVDTF HHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHH AAFRKAMHKTGLRWYGVRVAEPHHDGTVHWHLLCFMRKKDRRSITALLRKFAIREDREEL HHHHHHHHHCCCEEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTNTGPRFKSELINPRKGTPTSYIAKYISKNIDGRGLAKEISKETGRPLRDSAEHVSAWA CCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH SLHRVQQFRFFGIPGRQAYRELRLLAGQAARVQGERKAGAPVLDNPRLDAVLAAADAGCF HHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHCCCHHCCCCCCCCCCHHHHHHHHCCHHH ATYIMKQGGVLVPRKHHLVRTAYELNDEPSAYGDHGIRIYGIWSPIAEGKICTHAMKWKK HHHHHHCCCEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHH VRKAVDVQEAAADQGACAPWTRGNNCPLAENLNQQEKDKSADGGTRTDITRMDDKELHDY HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHHHCCCCCCCCCCCCCCCHHHHHHH LYSMSKKDRRELAARLRLVKPKRRKDYKQRITDHQHQQLVYELKSRGFDGSEKEVDLLLR HHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEE GGSIPSGAGLRIFYRNQRLKEDDKWRNQY CCCCCCCCCEEEEEECCCCCCCHHHCCCC >Mature Secondary Structure AVSKFTLHNAPTTGGSNEAAVVFPWNTPKKAVNPYLDPAEVAPESALSNLIALYAADNE CCCCEEECCCCCCCCCCCEEEEECCCCCHHHCCCCCCHHHCCHHHHHHHHHHHHCCCCH QEQLRRETLSDEVWERYFFNESRDPVQREIEQDRLISHAKTAREQQRFNPDLVIIADVGA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC QPAHISKPLLERIKYFHSLGRAKAYSRYLRETIRPCLERLERVRDSQVSASFRFMASHDG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC LEGLLVLPEMNQDQVKRLSTLVAAHMSMCLDAACGDLFVSDDVKPEEIRQAWERVAAEAM CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHH RLEVIPPAFEQLRRKKRRRKPVPYELIPPSLARMLCADWWCRKLWQMRCEWREEQLRAVC HEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVNKKASPYVSYEAVIHKREQRRKSLEFFRSHELINEDGDTLDMEDVVNASNSNPAHRRN EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHCCCCCCCHHHHH EMMACVKGLELIAEMRGDCAVFYTITCPSRFHATLNNGRPNPKWTSATVRQSSDYLVDTF HHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHH AAFRKAMHKTGLRWYGVRVAEPHHDGTVHWHLLCFMRKKDRRSITALLRKFAIREDREEL HHHHHHHHHCCCEEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTNTGPRFKSELINPRKGTPTSYIAKYISKNIDGRGLAKEISKETGRPLRDSAEHVSAWA CCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH SLHRVQQFRFFGIPGRQAYRELRLLAGQAARVQGERKAGAPVLDNPRLDAVLAAADAGCF HHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHCCCHHCCCCCCCCCCHHHHHHHHCCHHH ATYIMKQGGVLVPRKHHLVRTAYELNDEPSAYGDHGIRIYGIWSPIAEGKICTHAMKWKK HHHHHHCCCEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHH VRKAVDVQEAAADQGACAPWTRGNNCPLAENLNQQEKDKSADGGTRTDITRMDDKELHDY HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHHHCCCCCCCCCCCCCCCHHHHHHH LYSMSKKDRRELAARLRLVKPKRRKDYKQRITDHQHQQLVYELKSRGFDGSEKEVDLLLR HHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEE GGSIPSGAGLRIFYRNQRLKEDDKWRNQY CCCCCCCCCEEEEEECCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11677609