Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
---|---|
Accession | NC_003197 |
Length | 4,857,432 |
Click here to switch to the map view.
The map label for this gene is ybhB [H]
Identifier: 16764155
GI number: 16764155
Start: 858260
End: 858736
Strand: Reverse
Name: ybhB [H]
Synonym: STM0792
Alternate gene names: 16764155
Gene position: 858736-858260 (Counterclockwise)
Preceding gene: 16764156
Following gene: 16764150
Centisome position: 17.68
GC content: 58.49
Gene sequence:
>477_bases ATGAAACTTATCAGCAACGATTTGCGCGATGGAGATAAACTTCCTCATCGCCACGTTTTTAACGGTATGGGCTATGATGG CGATAATATTTCGCCGCATCTGGCCTGGGACAACGTGCCGATGGGCACCAAAAGTTTTGTCGTGACCTGTTACGATCCCG ACGCGCCGACCGGCTCCGGCTGGTGGCACTGGGTGGTGGTGAACCTCCCGGCGGATACGCGCGTACTGACCCAGGGGTTC GGCTCAGGCCTGGTGGCCGTACCAGACGGCGTCATTCAGACGCGTACCGATTTCGGTAAAGCGGGCTACGGCGGCGCGGC GCCGCCTAAAGGGGAAACGCACCGCTATATCTTTACGGTTCACGCGCTGGACGTCGAGCGTCTTGACGTTGATGAAGACG CCAGCGGCGCGATGGTCGGCTTTAACGTGCATTTCCATTCGCTCGCCAGCGCCTCGATCACGGCGATGTTCAGTTAA
Upstream 100 bases:
>100_bases GGTCAATGACGCGGTACACAATGAAACATTTTTTAGCCATTAATCAGCGGTAAGCGATGCTGCTTCTGGCTACACTTCTG GTGAGTCAAAAGGAGAGCGC
Downstream 100 bases:
>100_bases ACGCTGTGCCGGATGGCGGCGTAAACGTCTTACCCTGCCAACGGGTTGGGTAAGCCGAATAAGCGCCGCTCCATCCGGCA GCATTCACATAAAGTCCGGC
Product: kinase inhibitor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDNVPMGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLTQGF GSGLVAVPDGVIQTRTDFGKAGYGGAAPPKGETHRYIFTVHALDVERLDVDEDASGAMVGFNVHFHSLASASITAMFS
Sequences:
>Translated_158_residues MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDNVPMGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLTQGF GSGLVAVPDGVIQTRTDFGKAGYGGAAPPKGETHRYIFTVHALDVERLDVDEDASGAMVGFNVHFHSLASASITAMFS >Mature_158_residues MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDNVPMGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLTQGF GSGLVAVPDGVIQTRTDFGKAGYGGAAPPKGETHRYIFTVHALDVERLDVDEDASGAMVGFNVHFHSLASASITAMFS
Specific function: Unknown
COG id: COG1881
COG function: function code R; Phospholipid-binding protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0098 family [H]
Homologues:
Organism=Escherichia coli, GI1786990, Length=158, Percent_Identity=93.6708860759494, Blast_Score=308, Evalue=1e-85, Organism=Escherichia coli, GI1786757, Length=159, Percent_Identity=49.685534591195, Blast_Score=164, Evalue=4e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008914 - InterPro: IPR005247 [H]
Pfam domain/function: PF01161 PBP [H]
EC number: NA
Molecular weight: Translated: 17072; Mature: 17072
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDNVPMGTKSFVVTCYDPDAPTGSG CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCC WWHWVVVNLPADTRVLTQGFGSGLVAVPDGVIQTRTDFGKAGYGGAAPPKGETHRYIFTV EEEEEEEECCCCCEEEECCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEE HALDVERLDVDEDASGAMVGFNVHFHSLASASITAMFS EEEEEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEEC >Mature Secondary Structure MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDNVPMGTKSFVVTCYDPDAPTGSG CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCC WWHWVVVNLPADTRVLTQGFGSGLVAVPDGVIQTRTDFGKAGYGGAAPPKGETHRYIFTV EEEEEEEECCCCCEEEECCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEE HALDVERLDVDEDASGAMVGFNVHFHSLASASITAMFS EEEEEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3058702; 9278503; 11439028 [H]