| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is cstA [H]
Identifier: 16763977
GI number: 16763977
Start: 661274
End: 663379
Strand: Direct
Name: cstA [H]
Synonym: STM0600
Alternate gene names: 16763977
Gene position: 661274-663379 (Clockwise)
Preceding gene: 16763976
Following gene: 16763978
Centisome position: 13.61
GC content: 56.93
Gene sequence:
>2106_bases ATGAATAAATCAGGGAAATACCTCGTCTGGACAGCGCTCTCAGTATTGGGTGCGTTTGCCCTGGGCTATATTGCGTTAAA TCGTGGGGAACAGATCAACGCGCTATGGATCGTGGTGGCGTCGGTCTGTGTCTATCTTATTGCGTATCGTTTTTATGGGC TCTATATCGCCAAAAAAGTGCTGGCGGTTGACCCAACGCGTATGACGCCCGCGGTACGTCATAATGATGGTCTGGATTAT GTCCCGACCGATAAAAAAGTGCTGTTCGGTCACCATTTTGCGGCCATTGCTGGCGCAGGTCCGCTGGTCGGGCCGGTACT GGCGGCGCAGATGGGCTATCTGCCGGGGATGATCTGGCTGCTGGCGGGCGTCGTGCTGGCGGGAGCGGTGCAGGACTTTA TGGTGCTGTTCGTCTCGACCCGGCGCGATGGGCGTTCGCTTGGCGAGCTGGTTAAAGAGGAGATGGGCGCGACGGCAGGG GTGATCGCGCTGGTGGCCTGCTTTATGATCATGGTGATCATTCTGGCCGTCCTGGCGATGATCGTGGTGAAAGCGCTGAC CCATAGCCCGTGGGGAACGTACACTGTCGCGTTCACTATTCCACTGGCGATTTTTATGGGCATCTACTTGCGTTATTTGC GTCCGGGGCGCATCGGCGAGGTGTCGGTCATTGGGCTGGTATTTCTTATTTTCGCTATTATTTCCGGCGGATGGGTGGCG GCAAGCCCAACCTGGGCGCCGTACTTTGATTTTACTGGCGTGCAGCTTACCTGGATGCTGGTGGGTTATGGTTTTGTCGC GGCGGTACTGCCGGTCTGGCTGCTGCTCGCGCCGCGTGATTACCTCTCTACCTTCCTGAAAATTGGTACGATTGTCGGTC TGGCGGTCGGGATTCTGATTATGCGTCCGACGCTGACTATGCCGGCGCTGACCAAATTTGTTGATGGTACCGGACCGGTC TGGACGGGCGACCTGTTCCCGTTCCTGTTTATTACCATCGCCTGCGGCGCGGTCTCCGGTTTCCATGCGCTCATCTCCTC CGGCACGACGCCGAAGATGTTGGCCAACGAAGGCCAGGCCTGCTTTATCGGCTACGGCGGGATGTTAATGGAATCTTTCG TCGCCATTATGGCGCTGGTCTCCGCCTGTATTATCGATCCGGGTGTTTACTTTGCGATGAATAGCCCGATGGCGGTACTG GCGCCAGCGGGGACAGCGGATGTCGTAGCTTCTGCCGCGCAGGTGGTCAGTAGTTGGGGTTTCGCTATCACGCCGGATAC GTTACACCAGATTGCCAATGAAGTCGGCGAACAATCCATTATCTCCCGCGCAGGCGGAGCGCCAACGCTGGCGGTAGGGA TGGCCTACATTTTACATGGCGCGTTGGGCGGCATGATGGATGTGGCGTTCTGGTATCACTTCGCCATTCTGTTTGAAGCG CTGTTTATTCTGACGGCGGTGGATGCGGGCACCCGTGCGGCGCGCTTTATGTTGCAGGATTTGTTGGGCGTAGTGTCGCC AGGGCTGAAACGTACCGATTCGTTGCCAGCGAACCTGCTTGCTACGGCATTGTGCGTGCTGGCGTGGGGGTATTTCCTCC ATCAGGGCGTGGTCGATCCGTTGGGCGGTATTAACACCCTGTGGCCGCTGTTTGGCATCGCTAACCAGATGCTGGCGGGT ATGGCGCTGATGCTTTGCGCCGTGGTACTGTTCAAAATGAAGCGTCAGCGTTATGCGTGGGTCGCGCTGGTGCCGACGGC CTGGCTGCTGATTTGTACGCTGACGGCGGGTTGGCAGAAAGCGTTTAGTCCGGATGCGAAAATCGGCTTCCTGGCCATTG CCAATAAGTTCCAGGCGATGATCGACAGCGGCAATATTCCGCCGCAATACACCGAATCGCAACTCGCGCAGTTGGTATTC AATAACCGTCTGGATGCCGGGCTAACCATCTTCTTTATGGTGGTGGTCGTGGTGCTGGCGGTCTTCTCTATTAAGACGGC GCTGGCCGCTCTGAAGATTGATAAACCGACGGCGAATGAAACGCCGTATGAGCCGATGCCGGAAAATGTGGATGAGATCG TGACGCAGGCGAAAGGCGCGCACTAA
Upstream 100 bases:
>100_bases ACAATCCGGTTTTATCATGTTGTTGTGTTGTTAATTACGGTAAAGGTGTTATAGAAACAAAATGTAACATCTCTCTGGAA CACCCAAACGGACAACAACT
Downstream 100 bases:
>100_bases TCTTTTTACATCAATAGCCCTCTCCAGAATAAGGAGAGGGCATTTGAATGACAGGTGACAACGATGTTCGATACGCTTTC GAAAGCCGGAAAATATCTGG
Product: carbon starvation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 701; Mature: 701
Protein sequence:
>701_residues MNKSGKYLVWTALSVLGAFALGYIALNRGEQINALWIVVASVCVYLIAYRFYGLYIAKKVLAVDPTRMTPAVRHNDGLDY VPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMIWLLAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGATAG VIALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLAIFMGIYLRYLRPGRIGEVSVIGLVFLIFAIISGGWVA ASPTWAPYFDFTGVQLTWMLVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAVGILIMRPTLTMPALTKFVDGTGPV WTGDLFPFLFITIACGAVSGFHALISSGTTPKMLANEGQACFIGYGGMLMESFVAIMALVSACIIDPGVYFAMNSPMAVL APAGTADVVASAAQVVSSWGFAITPDTLHQIANEVGEQSIISRAGGAPTLAVGMAYILHGALGGMMDVAFWYHFAILFEA LFILTAVDAGTRAARFMLQDLLGVVSPGLKRTDSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAG MALMLCAVVLFKMKRQRYAWVALVPTAWLLICTLTAGWQKAFSPDAKIGFLAIANKFQAMIDSGNIPPQYTESQLAQLVF NNRLDAGLTIFFMVVVVVLAVFSIKTALAALKIDKPTANETPYEPMPENVDEIVTQAKGAH
Sequences:
>Translated_701_residues MNKSGKYLVWTALSVLGAFALGYIALNRGEQINALWIVVASVCVYLIAYRFYGLYIAKKVLAVDPTRMTPAVRHNDGLDY VPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMIWLLAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGATAG VIALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLAIFMGIYLRYLRPGRIGEVSVIGLVFLIFAIISGGWVA ASPTWAPYFDFTGVQLTWMLVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAVGILIMRPTLTMPALTKFVDGTGPV WTGDLFPFLFITIACGAVSGFHALISSGTTPKMLANEGQACFIGYGGMLMESFVAIMALVSACIIDPGVYFAMNSPMAVL APAGTADVVASAAQVVSSWGFAITPDTLHQIANEVGEQSIISRAGGAPTLAVGMAYILHGALGGMMDVAFWYHFAILFEA LFILTAVDAGTRAARFMLQDLLGVVSPGLKRTDSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAG MALMLCAVVLFKMKRQRYAWVALVPTAWLLICTLTAGWQKAFSPDAKIGFLAIANKFQAMIDSGNIPPQYTESQLAQLVF NNRLDAGLTIFFMVVVVVLAVFSIKTALAALKIDKPTANETPYEPMPENVDEIVTQAKGAH >Mature_701_residues MNKSGKYLVWTALSVLGAFALGYIALNRGEQINALWIVVASVCVYLIAYRFYGLYIAKKVLAVDPTRMTPAVRHNDGLDY VPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMIWLLAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGATAG VIALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLAIFMGIYLRYLRPGRIGEVSVIGLVFLIFAIISGGWVA ASPTWAPYFDFTGVQLTWMLVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAVGILIMRPTLTMPALTKFVDGTGPV WTGDLFPFLFITIACGAVSGFHALISSGTTPKMLANEGQACFIGYGGMLMESFVAIMALVSACIIDPGVYFAMNSPMAVL APAGTADVVASAAQVVSSWGFAITPDTLHQIANEVGEQSIISRAGGAPTLAVGMAYILHGALGGMMDVAFWYHFAILFEA LFILTAVDAGTRAARFMLQDLLGVVSPGLKRTDSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAG MALMLCAVVLFKMKRQRYAWVALVPTAWLLICTLTAGWQKAFSPDAKIGFLAIANKFQAMIDSGNIPPQYTESQLAQLVF NNRLDAGLTIFFMVVVVVLAVFSIKTALAALKIDKPTANETPYEPMPENVDEIVTQAKGAH
Specific function: Peptide utilization during carbon starvation [H]
COG id: COG1966
COG function: function code T; Carbon starvation protein, predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CstA family [H]
Homologues:
Organism=Escherichia coli, GI1786814, Length=701, Percent_Identity=97.2895863052782, Blast_Score=1371, Evalue=0.0, Organism=Escherichia coli, GI87082431, Length=713, Percent_Identity=61.5708274894811, Blast_Score=866, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003706 [H]
Pfam domain/function: PF02554 CstA [H]
EC number: NA
Molecular weight: Translated: 75039; Mature: 75039
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSGKYLVWTALSVLGAFALGYIALNRGEQINALWIVVASVCVYLIAYRFYGLYIAKKV CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMIWL HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGATAGVIALVACFMIMVIILAVLAM HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH IVVKALTHSPWGTYTVAFTIPLAIFMGIYLRYLRPGRIGEVSVIGLVFLIFAIISGGWVA HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEE ASPTWAPYFDFTGVQLTWMLVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAVGILI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH MRPTLTMPALTKFVDGTGPVWTGDLFPFLFITIACGAVSGFHALISSGTTPKMLANEGQA HCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCE CFIGYGGMLMESFVAIMALVSACIIDPGVYFAMNSPMAVLAPAGTADVVASAAQVVSSWG EEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHCC FAITPDTLHQIANEVGEQSIISRAGGAPTLAVGMAYILHGALGGMMDVAFWYHFAILFEA CEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFILTAVDAGTRAARFMLQDLLGVVSPGLKRTDSLPANLLATALCVLAWGYFLHQGVVDP HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC LGGINTLWPLFGIANQMLAGMALMLCAVVLFKMKRQRYAWVALVPTAWLLICTLTAGWQK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHH AFSPDAKIGFLAIANKFQAMIDSGNIPPQYTESQLAQLVFNNRLDAGLTIFFMVVVVVLA HCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH VFSIKTALAALKIDKPTANETPYEPMPENVDEIVTQAKGAH HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure MNKSGKYLVWTALSVLGAFALGYIALNRGEQINALWIVVASVCVYLIAYRFYGLYIAKKV CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMIWL HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGATAGVIALVACFMIMVIILAVLAM HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH IVVKALTHSPWGTYTVAFTIPLAIFMGIYLRYLRPGRIGEVSVIGLVFLIFAIISGGWVA HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEE ASPTWAPYFDFTGVQLTWMLVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAVGILI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH MRPTLTMPALTKFVDGTGPVWTGDLFPFLFITIACGAVSGFHALISSGTTPKMLANEGQA HCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCE CFIGYGGMLMESFVAIMALVSACIIDPGVYFAMNSPMAVLAPAGTADVVASAAQVVSSWG EEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHCC FAITPDTLHQIANEVGEQSIISRAGGAPTLAVGMAYILHGALGGMMDVAFWYHFAILFEA CEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFILTAVDAGTRAARFMLQDLLGVVSPGLKRTDSLPANLLATALCVLAWGYFLHQGVVDP HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC LGGINTLWPLFGIANQMLAGMALMLCAVVLFKMKRQRYAWVALVPTAWLLICTLTAGWQK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHH AFSPDAKIGFLAIANKFQAMIDSGNIPPQYTESQLAQLVFNNRLDAGLTIFFMVVVVVLA HCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH VFSIKTALAALKIDKPTANETPYEPMPENVDEIVTQAKGAH HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1848300; 9278503; 2521622 [H]