Click here to switch to the map view.

The map label for this gene is ybdZ [H]

Identifier: 16763964

GI number: 16763964

Start: 645247

End: 645465

Strand: Direct

Name: ybdZ [H]

Synonym: STM0587

Alternate gene names: 16763964

Gene position: 645247-645465 (Clockwise)

Preceding gene: 16763963

Following gene: 16763965

Centisome position: 13.28

GC content: 54.79

Gene sequence:

>219_bases
ATGGAATTCAGTAATCCCTTCGATAATCCGCAGGGACAGTTTTACATCCTGCAAAATGCGCAGCGTCAATTCAGCCTTTG
GCCAGCGGCATGTGCGCTTCCCGCAGGCTGGGACGTGGTATGCGAACCGCAATCGCAGGACGCGTGCCAGCAGTGGCTTA
ATACGCGCTGGACAACACTGAATCCGGCGCATTATGCCGATAAGCAGGAGGCGAAATGA

Upstream 100 bases:

>100_bases
GCTTTGCTGGCGCGGCGGGCTAACGCAAGGGCTGATGCTGCTTTGGCAGCCGCTTATCGACACGCTTTAACCGGGCACAT
GTCCATGACAGGAGTTGAGT

Downstream 100 bases:

>100_bases
CGCAGCGTTTACCGTTAGTCGCCGCCCAGCCGGGGATCTGGATGGCGGAAAAACTCTCTGATTTACCCTCCGCCTGGAGC
GTGGCGCACTATGTGGAACT

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MEFSNPFDNPQGQFYILQNAQRQFSLWPAACALPAGWDVVCEPQSQDACQQWLNTRWTTLNPAHYADKQEAK

Sequences:

>Translated_72_residues
MEFSNPFDNPQGQFYILQNAQRQFSLWPAACALPAGWDVVCEPQSQDACQQWLNTRWTTLNPAHYADKQEAK
>Mature_72_residues
MEFSNPFDNPQGQFYILQNAQRQFSLWPAACALPAGWDVVCEPQSQDACQQWLNTRWTTLNPAHYADKQEAK

Specific function: Could be involved in enterobactin synthesis [H]

COG id: COG3251

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis mbtH [H]

Homologues:

Organism=Escherichia coli, GI87081760, Length=72, Percent_Identity=66.6666666666667, Blast_Score=107, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015166
- InterPro:   IPR005153 [H]

Pfam domain/function: PF03621 MbtH [H]

EC number: NA

Molecular weight: Translated: 8302; Mature: 8302

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFSNPFDNPQGQFYILQNAQRQFSLWPAACALPAGWDVVCEPQSQDACQQWLNTRWTTL
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCC
NPAHYADKQEAK
CCCCCCCCCCCC
>Mature Secondary Structure
MEFSNPFDNPQGQFYILQNAQRQFSLWPAACALPAGWDVVCEPQSQDACQQWLNTRWTTL
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCC
NPAHYADKQEAK
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2974033; 1826089; 9278503 [H]