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The map label for this gene is rfbI [H]

Identifier: 16763937

GI number: 16763937

Start: 617360

End: 617722

Strand: Reverse

Name: rfbI [H]

Synonym: STM0559

Alternate gene names: 16763937

Gene position: 617722-617360 (Counterclockwise)

Preceding gene: 16763938

Following gene: 16763936

Centisome position: 12.72

GC content: 46.56

Gene sequence:

>363_bases
ATGTTGAAGTTATTCGCTAAGTACACATCGATCGGTGTTCTTAACACGCTTATTCATTGGGGCGTATTTGCTTTTTGTGT
GTATGGGATGCATACGCATCAGGCGTTGGCGAACTTTTCCGGTTTTGTTATCGCCGTATCGTTCAGCTTCTATGCCAATG
CGCGCTTCACCTTTAACGCCAGCACCACCACGCTTCGCTACATGATGTACGTGGGATTTATGGGAACACTGAGCGCCGTT
GTTGGCTGGATGGCTGACAAATGTTCCCTGCCGCCACTCCTTACTCTTGTCACCTTTTCAGCTATCAGCCTGATATGCGG
ATTCATTTATTCAAAGTTCATTGTCTTTAGGGATGCGAAATGA

Upstream 100 bases:

>100_bases
AACTTTAAACTATTGAATACCACATTATTGATCGTTTATATCGATCAAAGCAATTTGTAGTGCTACACTCCAGACCTTTC
CGAATCCGCTGATTTTCATA

Downstream 100 bases:

>100_bases
AAATCTCGTTAGTCGTTCCGGTCTTCAATGAAGAAGCCACGATACCTATTTTCTATAAAACGGTTCGCGAGTTTGAAGAG
CTAAAACCGTATGAAGTTGA

Product: glycosyl translocase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MLKLFAKYTSIGVLNTLIHWGVFAFCVYGMHTHQALANFSGFVIAVSFSFYANARFTFNASTTTLRYMMYVGFMGTLSAV
VGWMADKCSLPPLLTLVTFSAISLICGFIYSKFIVFRDAK

Sequences:

>Translated_120_residues
MLKLFAKYTSIGVLNTLIHWGVFAFCVYGMHTHQALANFSGFVIAVSFSFYANARFTFNASTTTLRYMMYVGFMGTLSAV
VGWMADKCSLPPLLTLVTFSAISLICGFIYSKFIVFRDAK
>Mature_120_residues
MLKLFAKYTSIGVLNTLIHWGVFAFCVYGMHTHQALANFSGFVIAVSFSFYANARFTFNASTTTLRYMMYVGFMGTLSAV
VGWMADKCSLPPLLTLVTFSAISLICGFIYSKFIVFRDAK

Specific function: Involved in O antigen modification. Involved in the translocation of bactoprenol-linked glucose across the cytoplasmic membrane [H]

COG id: COG2246

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gtrA family [H]

Homologues:

Organism=Escherichia coli, GI1788691, Length=120, Percent_Identity=81.6666666666667, Blast_Score=209, Evalue=5e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016480
- InterPro:   IPR007267 [H]

Pfam domain/function: PF04138 GtrA [H]

EC number: NA

Molecular weight: Translated: 13389; Mature: 13389

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLFAKYTSIGVLNTLIHWGVFAFCVYGMHTHQALANFSGFVIAVSFSFYANARFTFNA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHEECCEEEECC
STTTLRYMMYVGFMGTLSAVVGWMADKCSLPPLLTLVTFSAISLICGFIYSKFIVFRDAK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure
MLKLFAKYTSIGVLNTLIHWGVFAFCVYGMHTHQALANFSGFVIAVSFSFYANARFTFNA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHEECCEEEECC
STTTLRYMMYVGFMGTLSAVVGWMADKCSLPPLLTLVTFSAISLICGFIYSKFIVFRDAK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]