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The map label for this gene is yhgA [C]

Identifier: 16763859

GI number: 16763859

Start: 537930

End: 538865

Strand: Reverse

Name: yhgA [C]

Synonym: STM0479

Alternate gene names: 16763859

Gene position: 538865-537930 (Counterclockwise)

Preceding gene: 16763860

Following gene: 16763856

Centisome position: 11.09

GC content: 53.1

Gene sequence:

>936_bases
ATGGAACGTCTACCCACCACGCCGCACGATGCGGTATTTCGACAGATGCTGATGCAAAAAGAGGTCGCCCGCGACTTTCT
GGCTATCCACATGCCAGAAGACTTTCTTGCAATCTGCGATCTGGATTCACTGAAGCTGGAGTCGGGGAGTTTTGTTGAAG
ACAATTTACGCAGCCGCTATTCAGATATTCTCTACTCTCTGCATACCCAACACGGCCCCGGGTATGTTTACGCGCTCATT
GAACATCAGAGCAAATCAGACCGGCTGATGGCTTTTCGCCTGATGCGTTACGCCATTGCCGCCATGCAGCGTCATCTGGA
TGCCGGTCATGATACCTTGCCGCTGGTGGTACCAATCCTTTTTTATCACGGTCCGGAAAGCCCGTGGCCCTATAGCCTTA
ACTGGCATAATATGTTTGTGAAACCGGATATGGCGAAGGCCTTATACAGCCGCGATTTTGCGCTGGTCGACCTGACGACA
ATGCCGGATAATCAGCTTTTGCAGCATCGGCGGATAGCGATGTTAGAGCTCCTGCAAAAACATATTCGTCAACGCGATTT
AAGCGAACTGCTCGACCCCCTTATCACGCTTTTAACGCAGGATCATTTGACGGACGCGCAGCTCAGTGTGCTGATCAACT
ATATGTTGAAAGCAGGAAACGCCGCAGAACCCGGGGCGCTAATTCGTCAACTGGCGCAGGGCGCGCCGCAGTATAAGGAA
CAACTGATGACAATAGCGGAATGGCTGGAAGAAAAAGGCCGAACGGAAGGGTTGCAAAAGGGCCTGCAAAAAGGCCTTGA
GCAAGGGTTAGCACAAGGCCGTGAGGCCGAAGCGCGCGCTATTGCCCGCAAAATGCTTGCCAACGGGCTGGAACCCGGGC
TCATCGCCAGCGTCACCGGCATTACGCCGGAAGAGCTTTCTACGCTTTCGCATTAG

Upstream 100 bases:

>100_bases
AAGTACGGAAGACGACTCGCAAACAGAGTAATTGCCCGCTGGTTTGTCCTCGTTGTCGCTGACAGAGTGGTCGCTACAGT
CAGGCAACAAAGGACGGGGC

Downstream 100 bases:

>100_bases
CGGCGCCGCGCGCACTCATAAAGCGCGCGGCCCACCGCCTTTTAGCTTGCCGTAGGTGCCAGATCGCCGCCGTTGAGATC
GCGCTTCACTTCAGTGACTT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MERLPTTPHDAVFRQMLMQKEVARDFLAIHMPEDFLAICDLDSLKLESGSFVEDNLRSRYSDILYSLHTQHGPGYVYALI
EHQSKSDRLMAFRLMRYAIAAMQRHLDAGHDTLPLVVPILFYHGPESPWPYSLNWHNMFVKPDMAKALYSRDFALVDLTT
MPDNQLLQHRRIAMLELLQKHIRQRDLSELLDPLITLLTQDHLTDAQLSVLINYMLKAGNAAEPGALIRQLAQGAPQYKE
QLMTIAEWLEEKGRTEGLQKGLQKGLEQGLAQGREAEARAIARKMLANGLEPGLIASVTGITPEELSTLSH

Sequences:

>Translated_311_residues
MERLPTTPHDAVFRQMLMQKEVARDFLAIHMPEDFLAICDLDSLKLESGSFVEDNLRSRYSDILYSLHTQHGPGYVYALI
EHQSKSDRLMAFRLMRYAIAAMQRHLDAGHDTLPLVVPILFYHGPESPWPYSLNWHNMFVKPDMAKALYSRDFALVDLTT
MPDNQLLQHRRIAMLELLQKHIRQRDLSELLDPLITLLTQDHLTDAQLSVLINYMLKAGNAAEPGALIRQLAQGAPQYKE
QLMTIAEWLEEKGRTEGLQKGLQKGLEQGLAQGREAEARAIARKMLANGLEPGLIASVTGITPEELSTLSH
>Mature_311_residues
MERLPTTPHDAVFRQMLMQKEVARDFLAIHMPEDFLAICDLDSLKLESGSFVEDNLRSRYSDILYSLHTQHGPGYVYALI
EHQSKSDRLMAFRLMRYAIAAMQRHLDAGHDTLPLVVPILFYHGPESPWPYSLNWHNMFVKPDMAKALYSRDFALVDLTT
MPDNQLLQHRRIAMLELLQKHIRQRDLSELLDPLITLLTQDHLTDAQLSVLINYMLKAGNAAEPGALIRQLAQGAPQYKE
QLMTIAEWLEEKGRTEGLQKGLQKGLEQGLAQGREAEARAIARKMLANGLEPGLIASVTGITPEELSTLSH

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1789816, Length=305, Percent_Identity=49.1803278688525, Blast_Score=313, Evalue=1e-86,
Organism=Escherichia coli, GI1788643, Length=306, Percent_Identity=49.6732026143791, Blast_Score=312, Evalue=2e-86,
Organism=Escherichia coli, GI1788577, Length=305, Percent_Identity=48.1967213114754, Blast_Score=302, Evalue=2e-83,
Organism=Escherichia coli, GI1786324, Length=309, Percent_Identity=46.6019417475728, Blast_Score=297, Evalue=5e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 35258; Mature: 35258

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLPTTPHDAVFRQMLMQKEVARDFLAIHMPEDFLAICDLDSLKLESGSFVEDNLRSRY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHCCCCCCCHHHHHHHHH
SDILYSLHTQHGPGYVYALIEHQSKSDRLMAFRLMRYAIAAMQRHLDAGHDTLPLVVPIL
HHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FYHGPESPWPYSLNWHNMFVKPDMAKALYSRDFALVDLTTMPDNQLLQHRRIAMLELLQK
HHCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
HIRQRDLSELLDPLITLLTQDHLTDAQLSVLINYMLKAGNAAEPGALIRQLAQGAPQYKE
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHH
QLMTIAEWLEEKGRTEGLQKGLQKGLEQGLAQGREAEARAIARKMLANGLEPGLIASVTG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHCCC
ITPEELSTLSH
CCHHHHHHCCC
>Mature Secondary Structure
MERLPTTPHDAVFRQMLMQKEVARDFLAIHMPEDFLAICDLDSLKLESGSFVEDNLRSRY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHCCCCCCCHHHHHHHHH
SDILYSLHTQHGPGYVYALIEHQSKSDRLMAFRLMRYAIAAMQRHLDAGHDTLPLVVPIL
HHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FYHGPESPWPYSLNWHNMFVKPDMAKALYSRDFALVDLTTMPDNQLLQHRRIAMLELLQK
HHCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
HIRQRDLSELLDPLITLLTQDHLTDAQLSVLINYMLKAGNAAEPGALIRQLAQGAPQYKE
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHH
QLMTIAEWLEEKGRTEGLQKGLQKGLEQGLAQGREAEARAIARKMLANGLEPGLIASVTG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHCCC
ITPEELSTLSH
CCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]