Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
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Accession | NC_003197 |
Length | 4,857,432 |
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The map label for this gene is pgpA [H]
Identifier: 16763800
GI number: 16763800
Start: 472980
End: 473495
Strand: Direct
Name: pgpA [H]
Synonym: STM0420
Alternate gene names: 16763800
Gene position: 472980-473495 (Clockwise)
Preceding gene: 16763799
Following gene: 16763805
Centisome position: 9.74
GC content: 54.07
Gene sequence:
>516_bases ATGACCATTTTGCCACGCCATAAAGATGTTGCGAAAAGTCGCCTGAATTTGCGCAATCCGTGGCACCTGCTCGCTACCGG CTTTGGCAGCGGGCTGAGCCCCGTGGTGCCGGGCACGATGGGCTCGCTGGCGGCGATCCCCTTCTGGTATTTGATGACGT TTCTGCCGTGGCAGCTTTATTCGCTGGTCGTGATGTTTGGGATCTGCATTGGCGTTTATCTTTGCCATCAGACGGCGAAA GATATGGGCGTACACGACCACGGCAGTATTGTCTGGGATGAATTTATCGGTATGTGGATAACGCTAATGGCGTTGCCGAC GACGGACTGGCAGTGGGTGGCTGCCGGGTTCGTTATTTTCCGCATTCTGGATATGTGGAAACCCTGGCCGATCCGTTGGT TTGATCGCAACGTGCACGGCGGCATGGGGATTATGATCGATGATATCGTCGCCGGGGTGATATCCGCTGGCATACTGTAT TTTATCGGTCATCACTGGCCGCTCGGTATTATTTAA
Upstream 100 bases:
>100_bases CTGGGTGTTCCCTTTACCTGCATAGGCCAAATGAGCGCAGATATTGAAGGGCTGAATTTTGTACGTGACGGAATGCCTGT CACCTTCGACTGGAAAGGAT
Downstream 100 bases:
>100_bases AGGGTTTGCCGGATGGCGGCATAAACGCCTTATCCGGCCTGCCCCTGAACAATATGTCGATTTCGCAGGCCCGATAAGCG CCGCGCCATCGGGCAATGGC
Product: phosphatidylglycerophosphatase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MTILPRHKDVAKSRLNLRNPWHLLATGFGSGLSPVVPGTMGSLAAIPFWYLMTFLPWQLYSLVVMFGICIGVYLCHQTAK DMGVHDHGSIVWDEFIGMWITLMALPTTDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILY FIGHHWPLGII
Sequences:
>Translated_171_residues MTILPRHKDVAKSRLNLRNPWHLLATGFGSGLSPVVPGTMGSLAAIPFWYLMTFLPWQLYSLVVMFGICIGVYLCHQTAK DMGVHDHGSIVWDEFIGMWITLMALPTTDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILY FIGHHWPLGII >Mature_170_residues TILPRHKDVAKSRLNLRNPWHLLATGFGSGLSPVVPGTMGSLAAIPFWYLMTFLPWQLYSLVVMFGICIGVYLCHQTAKD MGVHDHGSIVWDEFIGMWITLMALPTTDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILYF IGHHWPLGII
Specific function: One of the three phospholipid phosphatases, specifically hydrolyzes phosphatidylglycerophosphate [H]
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786620, Length=171, Percent_Identity=95.3216374269006, Blast_Score=332, Evalue=6e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: =3.1.3.27 [H]
Molecular weight: Translated: 19377; Mature: 19246
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILPRHKDVAKSRLNLRNPWHLLATGFGSGLSPVVPGTMGSLAAIPFWYLMTFLPWQLY CCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SLVVMFGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITLMALPTTDWQWVAAGFVIF HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILYFIGHHWPLGII HHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TILPRHKDVAKSRLNLRNPWHLLATGFGSGLSPVVPGTMGSLAAIPFWYLMTFLPWQLY CCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SLVVMFGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITLMALPTTDWQWVAAGFVIF HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILYFIGHHWPLGII HHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2846510; 9278503 [H]