Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
---|---|
Accession | NC_003197 |
Length | 4,857,432 |
Click here to switch to the map view.
The map label for this gene is thiL
Identifier: 16763799
GI number: 16763799
Start: 472025
End: 473002
Strand: Direct
Name: thiL
Synonym: STM0419
Alternate gene names: 16763799
Gene position: 472025-473002 (Clockwise)
Preceding gene: 16763798
Following gene: 16763800
Centisome position: 9.72
GC content: 56.54
Gene sequence:
>978_bases ATGGCATGTGGCGAGTTTTCCCTGATTGCCCGTTATTTTGACCGTGTAAGAAGCTCTCGTCTTGATGTTGAAACCGGTAT TGGCGACGATTGCGCGCTCCTGAATATTCCTGAAAAGCAGACCCTGGCGATCAGTACCGATACGCTGGTGGCGGGCAACC ACTTCCTCCCTGATATCGATCCTGCCGATCTGGCTTATAAAGCGTTGGCGGTGAATTTAAGCGATCTGGCCGCGATGGGG GCCGACCCGGCCTGGTTAACGCTGGCGTTAACGCTACCGGAAGTGGATGAGCCGTGGCTGGAGGCTTTTAGCGACAGCCT GTTTGCGCTATTGAATTACTACGATATGCAGCTCATTGGCGGCGACACCACGCGTGGACCGCTGTCGATGACGCTGGGTA TCCACGGTTATATCCCGGCAGGGCGCGCGCTCAAGCGATCTGGCGCGAAGCCGGGCGACTGGATTTATGTCACCGGTACG CCGGGCGACAGCGCTGCCGGGCTGGCGGTTTTGCAAAACCGGCTACAGGTGTCGGAGGAGACCGATGCTCACTATTTAAT TCAACGGCATTTACGTCCGACGCCGCGTATTTTACACGGCCAGGCGCTGCGTGACATCGCCAGCGCGGCTATCGATCTTT CCGATGGTCTGATTTCCGATCTGGGGCATATCGTCAAGGCCAGCGGCTGTGGGGCTAGAGTGGATGTTGATGCGTTGCCA AAATCCGATGCGATGATGCGCCATGTTGATGACGGGCAGGCGCTGCGTTGGGCGCTTTCCGGCGGCGAAGACTATGAGCT GTGCTTTACGGTGCCGGAACTGAACCGTGGCGCGCTGGATGTCGCCATTGGTCAACTGGGTGTTCCCTTTACCTGCATAG GCCAAATGAGCGCAGATATTGAAGGGCTGAATTTTGTACGTGACGGAATGCCTGTCACCTTCGACTGGAAAGGATATGAC CATTTTGCCACGCCATAA
Upstream 100 bases:
>100_bases GATTCGTCCCAACAAAAAGTGATTCACAGGCCGGAAAGATAGCGGGCGCTCGATACCCGCCGTCTCCGGCCTTTTCTTTT TTTCTGCTGAGGCATAACGT
Downstream 100 bases:
>100_bases AGATGTTGCGAAAAGTCGCCTGAATTTGCGCAATCCGTGGCACCTGCTCGCTACCGGCTTTGGCAGCGGGCTGAGCCCCG TGGTGCCGGGCACGATGGGC
Product: thiamine monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MACGEFSLIARYFDRVRSSRLDVETGIGDDCALLNIPEKQTLAISTDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMG ADPAWLTLALTLPEVDEPWLEAFSDSLFALLNYYDMQLIGGDTTRGPLSMTLGIHGYIPAGRALKRSGAKPGDWIYVTGT PGDSAAGLAVLQNRLQVSEETDAHYLIQRHLRPTPRILHGQALRDIASAAIDLSDGLISDLGHIVKASGCGARVDVDALP KSDAMMRHVDDGQALRWALSGGEDYELCFTVPELNRGALDVAIGQLGVPFTCIGQMSADIEGLNFVRDGMPVTFDWKGYD HFATP
Sequences:
>Translated_325_residues MACGEFSLIARYFDRVRSSRLDVETGIGDDCALLNIPEKQTLAISTDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMG ADPAWLTLALTLPEVDEPWLEAFSDSLFALLNYYDMQLIGGDTTRGPLSMTLGIHGYIPAGRALKRSGAKPGDWIYVTGT PGDSAAGLAVLQNRLQVSEETDAHYLIQRHLRPTPRILHGQALRDIASAAIDLSDGLISDLGHIVKASGCGARVDVDALP KSDAMMRHVDDGQALRWALSGGEDYELCFTVPELNRGALDVAIGQLGVPFTCIGQMSADIEGLNFVRDGMPVTFDWKGYD HFATP >Mature_324_residues ACGEFSLIARYFDRVRSSRLDVETGIGDDCALLNIPEKQTLAISTDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMGA DPAWLTLALTLPEVDEPWLEAFSDSLFALLNYYDMQLIGGDTTRGPLSMTLGIHGYIPAGRALKRSGAKPGDWIYVTGTP GDSAAGLAVLQNRLQVSEETDAHYLIQRHLRPTPRILHGQALRDIASAAIDLSDGLISDLGHIVKASGCGARVDVDALPK SDAMMRHVDDGQALRWALSGGEDYELCFTVPELNRGALDVAIGQLGVPFTCIGQMSADIEGLNFVRDGMPVTFDWKGYDH FATP
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family
Homologues:
Organism=Escherichia coli, GI1786619, Length=325, Percent_Identity=88, Blast_Score=586, Evalue=1e-169,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIL_SALTY (P55881)
Other databases:
- EMBL: U74758 - EMBL: AE006468 - PIR: T47117 - RefSeq: NP_459414.1 - ProteinModelPortal: P55881 - SMR: P55881 - PRIDE: P55881 - GeneID: 1251938 - GenomeReviews: AE006468_GR - KEGG: stm:STM0419 - NMPDR: fig|99287.1.peg.404 - HOGENOM: HBG577902 - OMA: MGAEPAW - ProtClustDB: PRK05731 - BioCyc: STYP99287:STM0419-MONOMER - BRENDA: 2.7.4.16 - InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 - PIRSF: PIRSF005303 - TIGRFAMs: TIGR01379
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C; SSF56042 AIR_synth_C; SSF55326 PurM_N-like
EC number: =2.7.4.16
Molecular weight: Translated: 34986; Mature: 34855
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACGEFSLIARYFDRVRSSRLDVETGIGDDCALLNIPEKQTLAISTDTLVAGNHFLPDID CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEECCEEEECCCCCCCCC PADLAYKALAVNLSDLAAMGADPAWLTLALTLPEVDEPWLEAFSDSLFALLNYYDMQLIG HHHHHHHHHHCCHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEC GDTTRGPLSMTLGIHGYIPAGRALKRSGAKPGDWIYVTGTPGDSAAGLAVLQNRLQVSEE CCCCCCCEEEEEEEEECCCCCHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC TDAHYLIQRHLRPTPRILHGQALRDIASAAIDLSDGLISDLGHIVKASGCGARVDVDALP CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEHHCCC KSDAMMRHVDDGQALRWALSGGEDYELCFTVPELNRGALDVAIGQLGVPFTCIGQMSADI CCCHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCEEEEHHCCCCCEEEECCCCCCC EGLNFVRDGMPVTFDWKGYDHFATP CCCHHHHCCCCEEEECCCCCCCCCC >Mature Secondary Structure ACGEFSLIARYFDRVRSSRLDVETGIGDDCALLNIPEKQTLAISTDTLVAGNHFLPDID CCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEECCEEEECCCCCCCCC PADLAYKALAVNLSDLAAMGADPAWLTLALTLPEVDEPWLEAFSDSLFALLNYYDMQLIG HHHHHHHHHHCCHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEC GDTTRGPLSMTLGIHGYIPAGRALKRSGAKPGDWIYVTGTPGDSAAGLAVLQNRLQVSEE CCCCCCCEEEEEEEEECCCCCHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC TDAHYLIQRHLRPTPRILHGQALRDIASAAIDLSDGLISDLGHIVKASGCGARVDVDALP CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEHHCCC KSDAMMRHVDDGQALRWALSGGEDYELCFTVPELNRGALDVAIGQLGVPFTCIGQMSADI CCCHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCEEEEHHCCCCCEEEECCCCCCC EGLNFVRDGMPVTFDWKGYDHFATP CCCHHHHCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609