Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
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Accession | NC_003197 |
Length | 4,857,432 |
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The map label for this gene is psiF [H]
Identifier: 16763764
GI number: 16763764
Start: 437717
End: 438037
Strand: Direct
Name: psiF [H]
Synonym: STM0384
Alternate gene names: 16763764
Gene position: 437717-438037 (Clockwise)
Preceding gene: 308065970
Following gene: 16763765
Centisome position: 9.01
GC content: 51.4
Gene sequence:
>321_bases ATGAAAATAACATTACTGGTGACTTTACTTTTTGGCCTAGTCTTTTTAACCGCCGTCGGCGCAACCGAGAAACCGTTAAC GCCGCAACAGCAGCGCATGACGACCTGTAATCAGCAGGCGACAGCGCAAGCGTTGAAAGGCGATGCGCGTAAAACCTACC TTAGCGACTGCCTGAAAAACAGTCAGTCAGCCCCTGGCGAGAAAAGCCTGACGCCGCAACAGCAGAAAATGCGTGAATGC AATGTTCAGGCGACGGAACAATCACTGAAAGGCGATGACCGTAGCAAGTTTATGAGCGCCTGCCTGAAAAAAGCGGCGTA G
Upstream 100 bases:
>100_bases GGTGGTATTTTTGCCAGTAACAGCCAGACTTATATAAAGTCCCTGGGATATTTCCCAAAGGGACAACGTGTAATGTGTAC ACTGACAAAAGGATGGTGCT
Downstream 100 bases:
>100_bases TGCTATCGGGTGAGTCCTGAAAAACACTCACCCGAAATTTCATACTTCCTCCATGCGCTCTGTTTCTATAATTTGGGAAA ATTGTTTCTAAATGTTCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MKITLLVTLLFGLVFLTAVGATEKPLTPQQQRMTTCNQQATAQALKGDARKTYLSDCLKNSQSAPGEKSLTPQQQKMREC NVQATEQSLKGDDRSKFMSACLKKAA
Sequences:
>Translated_106_residues MKITLLVTLLFGLVFLTAVGATEKPLTPQQQRMTTCNQQATAQALKGDARKTYLSDCLKNSQSAPGEKSLTPQQQKMREC NVQATEQSLKGDDRSKFMSACLKKAA >Mature_106_residues MKITLLVTLLFGLVFLTAVGATEKPLTPQQQRMTTCNQQATAQALKGDARKTYLSDCLKNSQSAPGEKSLTPQQQKMREC NVQATEQSLKGDDRSKFMSACLKKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081731, Length=106, Percent_Identity=90.5660377358491, Blast_Score=197, Evalue=1e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011690 [H]
Pfam domain/function: PF07769 PsiF_repeat [H]
EC number: NA
Molecular weight: Translated: 11610; Mature: 11610
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITLLVTLLFGLVFLTAVGATEKPLTPQQQRMTTCNQQATAQALKGDARKTYLSDCLKN CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC SQSAPGEKSLTPQQQKMRECNVQATEQSLKGDDRSKFMSACLKKAA CCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKITLLVTLLFGLVFLTAVGATEKPLTPQQQRMTTCNQQATAQALKGDARKTYLSDCLKN CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC SQSAPGEKSLTPQQQKMRECNVQATEQSLKGDDRSKFMSACLKKAA CCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]