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The map label for this gene is yafS [H]

Identifier: 16763645

GI number: 16763645

Start: 302152

End: 302874

Strand: Direct

Name: yafS [H]

Synonym: STM0262

Alternate gene names: 16763645

Gene position: 302152-302874 (Clockwise)

Preceding gene: 16763642

Following gene: 16763647

Centisome position: 6.22

GC content: 50.76

Gene sequence:

>723_bases
ATGAAACCGGCAAGGCTCTCTCAAACTGTCGTTGCGCCCGGATGTTGGGGTGAGTTGCCCTGGGGCAATTACTACCGTGA
GGCGCTGGAACAGCAGCTAAATCCGTGGTTTGCAAAAATGTATGGTTTCCATTTGCTTAAAATCGGTAATTTAAGCGCAG
AAATCAATTCCGAAGCGTGCGCGGTCTCCCATCAGGTGAATGTTTCATCGCAGGGGTCGCCGATGCAGGTTCTGGCCGAT
CCGCTACATCTTCCTTTTGCAGATAAATCCGTCGATGTTTGTCTGCTGGCGCATACTTTGCCGTGGTGTACCGACCCGCA
CCGTTTATTGCGGGAAGCCGACCGCGTATTGATTGATGACGGTTGGCTGGTCATTAGTGGATTTAACCCGCTGAGTTTGA
TGGGGTTACGTAAACTGGTACCCGTTTTACGTAAAACACCGCCCTATAATAGTCGGATGTTTACCCTTATGCGGCAACTG
GACTGGCTGTCTTTACTCAATTTCGAAGTGCTACATTATAGCCGTTTTCATGTCTTACCCTGGAAAAAGCAGGGGGGGCG
GCTTTTAAATACGCATATCCCGGCGCTGGGCTGTTTACAGCTTATTGTGGCCCGTAAGCGGACCATCCCGCTTACGCTTA
ATCCGCTGCGACATAATAAAAGTAAAACCCCTATCCGCCAGACCGTTGGCGCCACCCGGCAATATCGCAAACCGGATGGC
TAA

Upstream 100 bases:

>100_bases
GCCTTCATCATTGGTCAGCACCCAGATGTAATTGTCCTGAAACGCGGGAATACTGTTAAGATTCATATATTACCTCTCAA
ATAATTAGCGGAAGGTTGCG

Downstream 100 bases:

>100_bases
GCTTCCGCCTGGTAGCCACTATCTTCCTGCGTGGGATTCATTGCCGCGGCGCGCGCCAGTTCATCACAACGCTCGTTTTC
GGGATGGCCTGCATGGCCTT

Product: SAM-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MKPARLSQTVVAPGCWGELPWGNYYREALEQQLNPWFAKMYGFHLLKIGNLSAEINSEACAVSHQVNVSSQGSPMQVLAD
PLHLPFADKSVDVCLLAHTLPWCTDPHRLLREADRVLIDDGWLVISGFNPLSLMGLRKLVPVLRKTPPYNSRMFTLMRQL
DWLSLLNFEVLHYSRFHVLPWKKQGGRLLNTHIPALGCLQLIVARKRTIPLTLNPLRHNKSKTPIRQTVGATRQYRKPDG

Sequences:

>Translated_240_residues
MKPARLSQTVVAPGCWGELPWGNYYREALEQQLNPWFAKMYGFHLLKIGNLSAEINSEACAVSHQVNVSSQGSPMQVLAD
PLHLPFADKSVDVCLLAHTLPWCTDPHRLLREADRVLIDDGWLVISGFNPLSLMGLRKLVPVLRKTPPYNSRMFTLMRQL
DWLSLLNFEVLHYSRFHVLPWKKQGGRLLNTHIPALGCLQLIVARKRTIPLTLNPLRHNKSKTPIRQTVGATRQYRKPDG
>Mature_240_residues
MKPARLSQTVVAPGCWGELPWGNYYREALEQQLNPWFAKMYGFHLLKIGNLSAEINSEACAVSHQVNVSSQGSPMQVLAD
PLHLPFADKSVDVCLLAHTLPWCTDPHRLLREADRVLIDDGWLVISGFNPLSLMGLRKLVPVLRKTPPYNSRMFTLMRQL
DWLSLLNFEVLHYSRFHVLPWKKQGGRLLNTHIPALGCLQLIVARKRTIPLTLNPLRHNKSKTPIRQTVGATRQYRKPDG

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=240, Percent_Identity=86.25, Blast_Score=431, Evalue=1e-122,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 27314; Mature: 27314

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPARLSQTVVAPGCWGELPWGNYYREALEQQLNPWFAKMYGFHLLKIGNLSAEINSEAC
CCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHEEEECCCCCCCCCCCE
AVSHQVNVSSQGSPMQVLADPLHLPFADKSVDVCLLAHTLPWCTDPHRLLREADRVLIDD
EEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCEEEEEC
GWLVISGFNPLSLMGLRKLVPVLRKTPPYNSRMFTLMRQLDWLSLLNFEVLHYSRFHVLP
CEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEC
WKKQGGRLLNTHIPALGCLQLIVARKRTIPLTLNPLRHNKSKTPIRQTVGATRQYRKPDG
CCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEECHHHCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKPARLSQTVVAPGCWGELPWGNYYREALEQQLNPWFAKMYGFHLLKIGNLSAEINSEAC
CCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHEEEECCCCCCCCCCCE
AVSHQVNVSSQGSPMQVLADPLHLPFADKSVDVCLLAHTLPWCTDPHRLLREADRVLIDD
EEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCEEEEEC
GWLVISGFNPLSLMGLRKLVPVLRKTPPYNSRMFTLMRQLDWLSLLNFEVLHYSRFHVLP
CEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEC
WKKQGGRLLNTHIPALGCLQLIVARKRTIPLTLNPLRHNKSKTPIRQTVGATRQYRKPDG
CCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEECHHHCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]