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The map label for this gene is yafE [H]

Identifier: 16763642

GI number: 16763642

Start: 299097

End: 299867

Strand: Direct

Name: yafE [H]

Synonym: STM0259

Alternate gene names: 16763642

Gene position: 299097-299867 (Clockwise)

Preceding gene: 16763641

Following gene: 16763645

Centisome position: 6.16

GC content: 52.53

Gene sequence:

>771_bases
ATGACAACGCATTCCCACCATGACAATGTTGAAAAGCAGTTTGGTTCACAGGCGAACGCCTATTTACATAGCGCCGTTCA
CGCAGCGGGTCGTGACTTAGCGCGGCTGGCGCAAAGGTTGTCTGATTTTTCCCACGCGAGCGTACTGGATATGGGATGTG
GGGCTGGACACGCGAGTTTTGTCGCTGCGCAACATGCCAACTCGGTCGTGGCATACGATTTATCCGCCAGCATGCTTGAG
GTTGTCGCTGGAGCGGCGGAAGAAAGACATTTAAGTAATATTACTCTCCGGCAAGGCTATGCCGAAAAACTGCCCTTTGA
AGATGCATCGTTTGAGGTGGTGATTAGCCGCTATTCCGCGCATCACTGGCACGACGTTGGTCAGGCATTGCGTGAGGTTA
ATCGTGTATTAAAGCCCGGTGGCGTGCTGATTATCATGGATGTCATGTCGCCTGGACATCCTGTACGCGATATCTGGCTG
CAAACGGTGGAGGCGTTACGCGACACGTCGCATGTCCGTAACTATTCCAGTGGCGAATGGCTGGCGATGGTCAATAACGC
GATGCTGGTAACGAATACCGTGATAACAGATCGTTTATCGCTGGAGTTTCGCTCATGGGTAACGCGGATGCGTACGCCAG
CGCCGTTGGTTGAGGCGATTCGATTATATCAGGCGAGCGCCCCGGTAGAGGTGAAGCGTTATTTTGAGTTGCAGGATGAC
GGTTCGTTTAGCAGCGATACTATCATGCTGGAAGCGCATAAAGCGGTATAG

Upstream 100 bases:

>100_bases
GTCCCGGCAAACCTGAGCAATAAAGGTGAGTCAGGTCTGCCGTGGGGCAGGCCTCTGCGGGTGCTGCCCTCTATTTTTCT
CATAACAGAAGGGCACTACC

Downstream 100 bases:

>100_bases
CAATTTAAAAGGCGCCGGGGGAAGCGGCGCCTTTTGGCTTTTTCGTCGGACAATATCAGGAGTCTGGCGTGCTATTGTCC
TTCACAAACAACGTAAGCTG

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MTTHSHHDNVEKQFGSQANAYLHSAVHAAGRDLARLAQRLSDFSHASVLDMGCGAGHASFVAAQHANSVVAYDLSASMLE
VVAGAAEERHLSNITLRQGYAEKLPFEDASFEVVISRYSAHHWHDVGQALREVNRVLKPGGVLIIMDVMSPGHPVRDIWL
QTVEALRDTSHVRNYSSGEWLAMVNNAMLVTNTVITDRLSLEFRSWVTRMRTPAPLVEAIRLYQASAPVEVKRYFELQDD
GSFSSDTIMLEAHKAV

Sequences:

>Translated_256_residues
MTTHSHHDNVEKQFGSQANAYLHSAVHAAGRDLARLAQRLSDFSHASVLDMGCGAGHASFVAAQHANSVVAYDLSASMLE
VVAGAAEERHLSNITLRQGYAEKLPFEDASFEVVISRYSAHHWHDVGQALREVNRVLKPGGVLIIMDVMSPGHPVRDIWL
QTVEALRDTSHVRNYSSGEWLAMVNNAMLVTNTVITDRLSLEFRSWVTRMRTPAPLVEAIRLYQASAPVEVKRYFELQDD
GSFSSDTIMLEAHKAV
>Mature_255_residues
TTHSHHDNVEKQFGSQANAYLHSAVHAAGRDLARLAQRLSDFSHASVLDMGCGAGHASFVAAQHANSVVAYDLSASMLEV
VAGAAEERHLSNITLRQGYAEKLPFEDASFEVVISRYSAHHWHDVGQALREVNRVLKPGGVLIIMDVMSPGHPVRDIWLQ
TVEALRDTSHVRNYSSGEWLAMVNNAMLVTNTVITDRLSLEFRSWVTRMRTPAPLVEAIRLYQASAPVEVKRYFELQDDG
SFSSDTIMLEAHKAV

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786404, Length=204, Percent_Identity=71.078431372549, Blast_Score=311, Evalue=4e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28360; Mature: 28229

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTHSHHDNVEKQFGSQANAYLHSAVHAAGRDLARLAQRLSDFSHASVLDMGCGAGHASF
CCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHH
VAAQHANSVVAYDLSASMLEVVAGAAEERHLSNITLRQGYAEKLPFEDASFEVVISRYSA
HHHHHCCCEEEEECHHHHHHHHHCCHHHHHHHCCHHHCCHHHHCCCCCCCHHHHHHHHHH
HHWHDVGQALREVNRVLKPGGVLIIMDVMSPGHPVRDIWLQTVEALRDTSHVRNYSSGEW
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCE
LAMVNNAMLVTNTVITDRLSLEFRSWVTRMRTPAPLVEAIRLYQASAPVEVKRYFELQDD
EEEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEHHEEEECCC
GSFSSDTIMLEAHKAV
CCCCCCEEEEEECCCC
>Mature Secondary Structure 
TTHSHHDNVEKQFGSQANAYLHSAVHAAGRDLARLAQRLSDFSHASVLDMGCGAGHASF
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHH
VAAQHANSVVAYDLSASMLEVVAGAAEERHLSNITLRQGYAEKLPFEDASFEVVISRYSA
HHHHHCCCEEEEECHHHHHHHHHCCHHHHHHHCCHHHCCHHHHCCCCCCCHHHHHHHHHH
HHWHDVGQALREVNRVLKPGGVLIIMDVMSPGHPVRDIWLQTVEALRDTSHVRNYSSGEW
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCE
LAMVNNAMLVTNTVITDRLSLEFRSWVTRMRTPAPLVEAIRLYQASAPVEVKRYFELQDD
EEEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEHHEEEECCC
GSFSSDTIMLEAHKAV
CCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1663890; 9278503 [H]