Click here to switch to the map view.

The map label for this gene is yidD [C]

Identifier: 167626217

GI number: 167626217

Start: 5225827

End: 5226081

Strand: Reverse

Name: yidD [C]

Synonym: Shal_4312

Alternate gene names: 167626217

Gene position: 5226081-5225827 (Counterclockwise)

Preceding gene: 167626218

Following gene: 167626216

Centisome position: 99.98

GC content: 46.67

Gene sequence:

>255_bases
ATGGCGAAAACTCAGTCGCCGTTACAATGGCTAGCAACCACGATTATTCGTGGTTACCAACTACTCATAAGCCCCATGCT
GGGGCCTCGTTGTAGGTTCAATCCAACGTGCTCACATTATGCAATCGAAGCAATTCGATTGCATGGTTTTGTGAAAGGGT
GTTGGTTTGCAGCGAAACGCATATTAAGATGTCACCCTTTACATCCGGGCGGTGAAGACCCCGTCCCTAACAAAAAACAT
AGGTGCGATAAATAG

Upstream 100 bases:

>100_bases
TACACCAGCATGATCTACCCGCTGTGGATATCGTTGTGCTTGTCAGAAATGGCGTGCTTGATATGGAAAACGCAGAACTA
AAAAACTTAGTAGAAAAGCT

Downstream 100 bases:

>100_bases
GTTATGGAATCTCAACGCAATATATTGCTGATCGGTTTGCTGTTTGTCAGCTTCCTACTGTGGCAACAGTGGCAAGCAGA
TCAAGCGCCTCAACCGGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MAKTQSPLQWLATTIIRGYQLLISPMLGPRCRFNPTCSHYAIEAIRLHGFVKGCWFAAKRILRCHPLHPGGEDPVPNKKH
RCDK

Sequences:

>Translated_84_residues
MAKTQSPLQWLATTIIRGYQLLISPMLGPRCRFNPTCSHYAIEAIRLHGFVKGCWFAAKRILRCHPLHPGGEDPVPNKKH
RCDK
>Mature_83_residues
AKTQSPLQWLATTIIRGYQLLISPMLGPRCRFNPTCSHYAIEAIRLHGFVKGCWFAAKRILRCHPLHPGGEDPVPNKKHR
CDK

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family [H]

Homologues:

Organism=Escherichia coli, GI87082322, Length=76, Percent_Identity=60.5263157894737, Blast_Score=100, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002696
- ProDom:   PD004225 [H]

Pfam domain/function: PF01809 DUF37 [H]

EC number: NA

Molecular weight: Translated: 9579; Mature: 9448

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTQSPLQWLATTIIRGYQLLISPMLGPRCRFNPTCSHYAIEAIRLHGFVKGCWFAAKR
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ILRCHPLHPGGEDPVPNKKHRCDK
HHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKTQSPLQWLATTIIRGYQLLISPMLGPRCRFNPTCSHYAIEAIRLHGFVKGCWFAAKR
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ILRCHPLHPGGEDPVPNKKHRCDK
HHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA