| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is glmU [H]
Identifier: 167626193
GI number: 167626193
Start: 5198867
End: 5200231
Strand: Reverse
Name: glmU [H]
Synonym: Shal_4288
Alternate gene names: 167626193
Gene position: 5200231-5198867 (Counterclockwise)
Preceding gene: 167626194
Following gene: 167626192
Centisome position: 99.49
GC content: 47.84
Gene sequence:
>1365_bases ATGGCATTGAATGTAGTAATTTTGGCCGCAGGCAAGGGAACCCGCATGCGCTCAGATCTTCCAAAAGTTCTTCACCCTAT CGCTCATAAGAGCATGGTTCAGCATGTAATTGATACTGCACATCAAGTGGGCAGTGATGCTATCCAGCTGGTTTATGGCT ATGGCGCCGATAAGCTACAAGCAAAACTGGGTGAGCAGCAGCTAAATTGGGTACTACAAGCTGAGCAATTAGGCACTGGG CATGCGGTAGCGCAGGCTAATGATAATATTAGTGATGACGATACGGTGCTGATTCTTTATGGTGATGTGCCACTGATCCA AGCTTCTACACTTGAAGCTTTACTTGCTGCTCGAGAAGATAATGGTCTAGCTATTTTGACTGTTAACCTGCCTAATCCGA CAGGCTATGGCCGTATAGTGCGAGAGGATGGAAACGTCGTTGGTATTGTTGAGCAGAAAGATGCCAATGCCGAGCAACTA GCTATCAGTGAGATCAATACTGGCATTATGGCGACGCCGGGTAAGCAACTAAAGGCTTGGTTAGGTCAATTATCATCAGA CAATGCTCAAGGTGAATACTACCTTACTGATATCGTTGCCATGGCACACAAAGATGGTGTTGCCATTACTACTGCGCAGC CTGAATCCGCTGTGGAAGTTGAAGGTGCAAATAACCGCGTACAACTGGCGCAGCTTGAGCGTGCTTACCAAGCGCGAGCA GCTGAAAAGCTGATGCTTGAAGGGGCCAATCTGCGCGATCCTGCTCGTATCGACATTCGCGGTGACGTCACCGTGGGCAT GGATGTGATGATCGACATTAACGTGGTTATCGAGGGTAAGGTGACTATCGGTAATAATGTCACTATTGGCGCGGGTGCCA TCCTTATCGATTGCGAGATTAGCGACAACGCAGTGATAAAACCTTACTCGATTATCGAGAGTGCAAAGGTTGGTGTTGAT GCCAGCGCAGGTCCTTTTGCACGCTTGCGTCCTGGCGCAGAGCTTAAACAAGACGCCCATATTGGCAACTTCGTTGAAAT GAAAAAAGCGGTATTAGGTAAAGGCTCTAAAGCGGGACATTTGGCCTATATTGGCGATGCGACTATCGGTGCTGGGGTAA ATATCGGTGCAGGTACTATTACCTGTAACTATGATGGTGCCAATAAGTTCCAAACGATTATTGAAGACAATGTATTTGTC GGCAGTGATACCCAGTTGGTTGCACCTGTGACTATTGGTGAAGGTGCTACTTTGGGGGCGGGTTCTACCATAACTAAAGA TGTTGCGGCTGGTGAGTTGGTTATCACCCGCGTTAAACAGCGTCATTTGACTGGCTGGGCGCGACCCGTTAAGCAGAAAA AGTAA
Upstream 100 bases:
>100_bases AAGTCGAGTCGCTTTTAATAACTGTATCGCTTAAAATCGGCTGTCTAATAAAGACCTCATTTTTCTAACATCAGTTAAAG CATTAGCTCAAGGATAATCC
Downstream 100 bases:
>100_bases AGATTAGTTATTTCAAAAAAGCGACTCTAGTGTCGCTTTTTTGCTTTTTATTTAATCGATTATTTAGGCGTTCAGTTTAT TGGAATAACGCCAATACCGA
Product: UDP-N-acetylglucosamine pyrophosphorylase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine pyrophosphorylase; N-acetylglucosamine-1-phosphate uridyltransferase; Glucosamine-1-phosphate N-acetyltransferase [H]
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MALNVVILAAGKGTRMRSDLPKVLHPIAHKSMVQHVIDTAHQVGSDAIQLVYGYGADKLQAKLGEQQLNWVLQAEQLGTG HAVAQANDNISDDDTVLILYGDVPLIQASTLEALLAAREDNGLAILTVNLPNPTGYGRIVREDGNVVGIVEQKDANAEQL AISEINTGIMATPGKQLKAWLGQLSSDNAQGEYYLTDIVAMAHKDGVAITTAQPESAVEVEGANNRVQLAQLERAYQARA AEKLMLEGANLRDPARIDIRGDVTVGMDVMIDINVVIEGKVTIGNNVTIGAGAILIDCEISDNAVIKPYSIIESAKVGVD ASAGPFARLRPGAELKQDAHIGNFVEMKKAVLGKGSKAGHLAYIGDATIGAGVNIGAGTITCNYDGANKFQTIIEDNVFV GSDTQLVAPVTIGEGATLGAGSTITKDVAAGELVITRVKQRHLTGWARPVKQKK
Sequences:
>Translated_454_residues MALNVVILAAGKGTRMRSDLPKVLHPIAHKSMVQHVIDTAHQVGSDAIQLVYGYGADKLQAKLGEQQLNWVLQAEQLGTG HAVAQANDNISDDDTVLILYGDVPLIQASTLEALLAAREDNGLAILTVNLPNPTGYGRIVREDGNVVGIVEQKDANAEQL AISEINTGIMATPGKQLKAWLGQLSSDNAQGEYYLTDIVAMAHKDGVAITTAQPESAVEVEGANNRVQLAQLERAYQARA AEKLMLEGANLRDPARIDIRGDVTVGMDVMIDINVVIEGKVTIGNNVTIGAGAILIDCEISDNAVIKPYSIIESAKVGVD ASAGPFARLRPGAELKQDAHIGNFVEMKKAVLGKGSKAGHLAYIGDATIGAGVNIGAGTITCNYDGANKFQTIIEDNVFV GSDTQLVAPVTIGEGATLGAGSTITKDVAAGELVITRVKQRHLTGWARPVKQKK >Mature_453_residues ALNVVILAAGKGTRMRSDLPKVLHPIAHKSMVQHVIDTAHQVGSDAIQLVYGYGADKLQAKLGEQQLNWVLQAEQLGTGH AVAQANDNISDDDTVLILYGDVPLIQASTLEALLAAREDNGLAILTVNLPNPTGYGRIVREDGNVVGIVEQKDANAEQLA ISEINTGIMATPGKQLKAWLGQLSSDNAQGEYYLTDIVAMAHKDGVAITTAQPESAVEVEGANNRVQLAQLERAYQARAA EKLMLEGANLRDPARIDIRGDVTVGMDVMIDINVVIEGKVTIGNNVTIGAGAILIDCEISDNAVIKPYSIIESAKVGVDA SAGPFARLRPGAELKQDAHIGNFVEMKKAVLGKGSKAGHLAYIGDATIGAGVNIGAGTITCNYDGANKFQTIIEDNVFVG SDTQLVAPVTIGEGATLGAGSTITKDVAAGELVITRVKQRHLTGWARPVKQKK
Specific function: Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-GlcNAc. Responsible for the acetylation of Glc-N-1-P to give GlcNAc-1-P and for the uridyl transfer from UTP to GlcNAc-1-P which produces UDP-GlcNAc [H]
COG id: COG1207
COG function: function code M; N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790168, Length=452, Percent_Identity=60.6194690265487, Blast_Score=566, Evalue=1e-162,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005882 - InterPro: IPR018357 - InterPro: IPR005835 - InterPro: IPR011004 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.23; =2.3.1.157 [H]
Molecular weight: Translated: 47853; Mature: 47722
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNVVILAAGKGTRMRSDLPKVLHPIAHKSMVQHVIDTAHQVGSDAIQLVYGYGADKLQ CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHH AKLGEQQLNWVLQAEQLGTGHAVAQANDNISDDDTVLILYGDVPLIQASTLEALLAARED HHHCHHHHHEEEEHHHCCCCCEEEECCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHCCC NGLAILTVNLPNPTGYGRIVREDGNVVGIVEQKDANAEQLAISEINTGIMATPGKQLKAW CCEEEEEEECCCCCCCCEEEEECCCEEEEEECCCCCHHHEEHHHCCCCEEECCCHHHHHH LGQLSSDNAQGEYYLTDIVAMAHKDGVAITTAQPESAVEVEGANNRVQLAQLERAYQARA HHHCCCCCCCCCEEHEEHHHHHCCCCEEEEECCCCCEEEEECCCCEEEHHHHHHHHHHHH AEKLMLEGANLRDPARIDIRGDVTVGMDVMIDINVVIEGKVTIGNNVTIGAGAILIDCEI HHHHHHCCCCCCCCEEEEEECCEEECEEEEEEEEEEEEEEEEECCEEEEECCEEEEEEEE SDNAVIKPYSIIESAKVGVDASAGPFARLRPGAELKQDAHIGNFVEMKKAVLGKGSKAGH CCCCEECCHHHHHHHHCCCCCCCCCCHHCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCE LAYIGDATIGAGVNIGAGTITCNYDGANKFQTIIEDNVFVGSDTQLVAPVTIGEGATLGA EEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCEEECCCCEEEEEEEECCCCCCCC GSTITKDVAAGELVITRVKQRHLTGWARPVKQKK CCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ALNVVILAAGKGTRMRSDLPKVLHPIAHKSMVQHVIDTAHQVGSDAIQLVYGYGADKLQ CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHH AKLGEQQLNWVLQAEQLGTGHAVAQANDNISDDDTVLILYGDVPLIQASTLEALLAARED HHHCHHHHHEEEEHHHCCCCCEEEECCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHCCC NGLAILTVNLPNPTGYGRIVREDGNVVGIVEQKDANAEQLAISEINTGIMATPGKQLKAW CCEEEEEEECCCCCCCCEEEEECCCEEEEEECCCCCHHHEEHHHCCCCEEECCCHHHHHH LGQLSSDNAQGEYYLTDIVAMAHKDGVAITTAQPESAVEVEGANNRVQLAQLERAYQARA HHHCCCCCCCCCEEHEEHHHHHCCCCEEEEECCCCCEEEEECCCCEEEHHHHHHHHHHHH AEKLMLEGANLRDPARIDIRGDVTVGMDVMIDINVVIEGKVTIGNNVTIGAGAILIDCEI HHHHHHCCCCCCCCEEEEEECCEEECEEEEEEEEEEEEEEEEECCEEEEECCEEEEEEEE SDNAVIKPYSIIESAKVGVDASAGPFARLRPGAELKQDAHIGNFVEMKKAVLGKGSKAGH CCCCEECCHHHHHHHHCCCCCCCCCCHHCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCE LAYIGDATIGAGVNIGAGTITCNYDGANKFQTIIEDNVFVGSDTQLVAPVTIGEGATLGA EEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCEEECCCCEEEEEEEECCCCCCCC GSTITKDVAAGELVITRVKQRHLTGWARPVKQKK CCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA