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The map label for this gene is fliP [H]

Identifier: 167626138

GI number: 167626138

Start: 5141243

End: 5141971

Strand: Reverse

Name: fliP [H]

Synonym: Shal_4233

Alternate gene names: 167626138

Gene position: 5141971-5141243 (Counterclockwise)

Preceding gene: 167626139

Following gene: 167626137

Centisome position: 98.37

GC content: 45.54

Gene sequence:

>729_bases
ATGTGGCGAGTGTTGCTGGTTTTTGTGTTGAGTTTTTCATCGGCGGCTTATGCGAGTGATGGCTTAACGTTATTTTCTCT
GGCAGATGGTGATAAGACACAGGCGGTGAGTGTAAAGCTGGAAATTTTAGCCTTGATGACAGTGCTGAGTTTTCTGCCCG
CATTATTAATGATGCTCACCAGCTTCACTCGAATCATTGTCGTGTTAGCCATTCTGCGTCAAGCCTTAGGTTTGCAACAA
AGCCCGCCCAACAAGGTATTAATCGGTATCGCTTTAGTGATGACCATTTTTATTATGCGACCCGTCGGGCAAGAGATCTA
TGACGATGCTTTTCTACCTTACGATATGGGACAGATAGAGCTTCCTGAGGCTGTGGCACGTGGCGAGGTGCCACTACGTC
AGTTTATGTTGGCACAAACTCGTGAGACGGATCTTGAGCAGATGCTGAAGATTGCCGACGAACCGATCACATTAACGGCC
GATGAAATTCCATTCTTTGTCCTGATGCCTGCATTTGTATTGAGTGAACTAAAGACCGCATTTCAGATTGGTTTCCTGCT
GTTCTTGCCTTTTTTGGTGATCGATTTGGTGGTTGCGAGCGTGTTGATGTCTATGGGTATGATGATGCTGTCGCCCCTTA
TTATCTCTTTGCCATTTAAATTAATGGTGTTTGTGTTAGTCGATGGTTGGTCTATGACGGTGAGTACCTTGGTGGCAAGT
TATGGTTAG

Upstream 100 bases:

>100_bases
CATTGCTCGGACGTGGGGAAGTCGTTGAGGTGAATGGTCGTTATGGGGTGCGCTTGCTTGAAGTTGAAGCGACCAGCCTA
ACTGGAGCTGTTGATTAACT

Downstream 100 bases:

>100_bases
CGCCTTGTTTAATCACAAAGTTGGCTCACAGAGAGATTGTTGATGAAGACTGGAAATAATGATGAAACATTCAATATTTC
GATCATAGATATGATTTATC

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MWRVLLVFVLSFSSAAYASDGLTLFSLADGDKTQAVSVKLEILALMTVLSFLPALLMMLTSFTRIIVVLAILRQALGLQQ
SPPNKVLIGIALVMTIFIMRPVGQEIYDDAFLPYDMGQIELPEAVARGEVPLRQFMLAQTRETDLEQMLKIADEPITLTA
DEIPFFVLMPAFVLSELKTAFQIGFLLFLPFLVIDLVVASVLMSMGMMMLSPLIISLPFKLMVFVLVDGWSMTVSTLVAS
YG

Sequences:

>Translated_242_residues
MWRVLLVFVLSFSSAAYASDGLTLFSLADGDKTQAVSVKLEILALMTVLSFLPALLMMLTSFTRIIVVLAILRQALGLQQ
SPPNKVLIGIALVMTIFIMRPVGQEIYDDAFLPYDMGQIELPEAVARGEVPLRQFMLAQTRETDLEQMLKIADEPITLTA
DEIPFFVLMPAFVLSELKTAFQIGFLLFLPFLVIDLVVASVLMSMGMMMLSPLIISLPFKLMVFVLVDGWSMTVSTLVAS
YG
>Mature_242_residues
MWRVLLVFVLSFSSAAYASDGLTLFSLADGDKTQAVSVKLEILALMTVLSFLPALLMMLTSFTRIIVVLAILRQALGLQQ
SPPNKVLIGIALVMTIFIMRPVGQEIYDDAFLPYDMGQIELPEAVARGEVPLRQFMLAQTRETDLEQMLKIADEPITLTA
DEIPFFVLMPAFVLSELKTAFQIGFLLFLPFLVIDLVVASVLMSMGMMMLSPLIISLPFKLMVFVLVDGWSMTVSTLVAS
YG

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=221, Percent_Identity=51.5837104072398, Blast_Score=223, Evalue=1e-59,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 26753; Mature: 26753

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRVLLVFVLSFSSAAYASDGLTLFSLADGDKTQAVSVKLEILALMTVLSFLPALLMMLT
CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFTRIIVVLAILRQALGLQQSPPNKVLIGIALVMTIFIMRPVGQEIYDDAFLPYDMGQIE
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LPEAVARGEVPLRQFMLAQTRETDLEQMLKIADEPITLTADEIPFFVLMPAFVLSELKTA
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCHHHHHHHHHHHHHHHH
FQIGFLLFLPFLVIDLVVASVLMSMGMMMLSPLIISLPFKLMVFVLVDGWSMTVSTLVAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YG
CC
>Mature Secondary Structure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CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]