| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
Click here to switch to the map view.
The map label for this gene is ftnA [H]
Identifier: 167626094
GI number: 167626094
Start: 5093727
End: 5094254
Strand: Reverse
Name: ftnA [H]
Synonym: Shal_4189
Alternate gene names: 167626094
Gene position: 5094254-5093727 (Counterclockwise)
Preceding gene: 167626097
Following gene: 167626091
Centisome position: 97.46
GC content: 43.37
Gene sequence:
>528_bases ATGTTAGCCCAGAAGATGATTGACCAGTTAAATGACCAGATCAATATGGAGTTCTTCTCCTCTAATCTGTATCTACAGAT GAGCGCATGGTGCGAAGATAAAGGCTTTGAAGGCGCAGCTAAGTTTATGCGTGCTCATGCCGAAGAGGAAATGGGGCATA TGCATCGTTTGTTTACTTATGTGAGTGAAACTGGCGGTATGCCTTTACTTGGGACTATCGAAGCACCACAAGCTGAGTTC TCATCACTGCTTGCTTTGTTTGAGTACACCTATGAGCACGAGCAATTGATCACTAAGAAGATCAACGAACTGGCTCATGC GGCTTTTACGAACCAAGATTATTCTACTTTTAACTTCTTACAGTGGTATGTGTCAGAGCAGCACGAAGAAGAGAAACTAT TCAAATCTATCGTCGATAAAATTCGCCTAGTGGGTGAAGATGGTAAGGCGCTATTCTTCGTAGATAAAGATTTGGCGCAG ATGGCGATTGAAGAGTCGGCGAGTGTAATGACTAGTGCTGCGGTATAA
Upstream 100 bases:
>100_bases ATTATTATTTATTTAACAATCACTTAAGTAAATTTTATTGCAATTACTAGCTAGCTTGATAACAATAACCGCCACAAACC GAAAGCCCTAAGGAATTGAT
Downstream 100 bases:
>100_bases GTCGCTTGTTTAAAAAATAAATCATAAAAAAGAGCAGCCTAGCTGCTCTTTTATGATCTCTAGTTTAAGTGTGGCTACAC TGCGCTGAGTTCTGGAGCTA
Product: ferroxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MLAQKMIDQLNDQINMEFFSSNLYLQMSAWCEDKGFEGAAKFMRAHAEEEMGHMHRLFTYVSETGGMPLLGTIEAPQAEF SSLLALFEYTYEHEQLITKKINELAHAAFTNQDYSTFNFLQWYVSEQHEEEKLFKSIVDKIRLVGEDGKALFFVDKDLAQ MAIEESASVMTSAAV
Sequences:
>Translated_175_residues MLAQKMIDQLNDQINMEFFSSNLYLQMSAWCEDKGFEGAAKFMRAHAEEEMGHMHRLFTYVSETGGMPLLGTIEAPQAEF SSLLALFEYTYEHEQLITKKINELAHAAFTNQDYSTFNFLQWYVSEQHEEEKLFKSIVDKIRLVGEDGKALFFVDKDLAQ MAIEESASVMTSAAV >Mature_175_residues MLAQKMIDQLNDQINMEFFSSNLYLQMSAWCEDKGFEGAAKFMRAHAEEEMGHMHRLFTYVSETGGMPLLGTIEAPQAEF SSLLALFEYTYEHEQLITKKINELAHAAFTNQDYSTFNFLQWYVSEQHEEEKLFKSIVDKIRLVGEDGKALFFVDKDLAQ MAIEESASVMTSAAV
Specific function: Iron-storage protein [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1788216, Length=161, Percent_Identity=64.5962732919255, Blast_Score=229, Evalue=1e-61, Organism=Escherichia coli, GI1788212, Length=137, Percent_Identity=35.7664233576642, Blast_Score=102, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: =1.16.3.1 [H]
Molecular weight: Translated: 20047; Mature: 20047
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAQKMIDQLNDQINMEFFSSNLYLQMSAWCEDKGFEGAAKFMRAHAEEEMGHMHRLFTY CCHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VSETGGMPLLGTIEAPQAEFSSLLALFEYTYEHEQLITKKINELAHAAFTNQDYSTFNFL HHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH QWYVSEQHEEEKLFKSIVDKIRLVGEDGKALFFVDKDLAQMAIEESASVMTSAAV HHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLAQKMIDQLNDQINMEFFSSNLYLQMSAWCEDKGFEGAAKFMRAHAEEEMGHMHRLFTY CCHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VSETGGMPLLGTIEAPQAEFSSLLALFEYTYEHEQLITKKINELAHAAFTNQDYSTFNFL HHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH QWYVSEQHEEEKLFKSIVDKIRLVGEDGKALFFVDKDLAQMAIEESASVMTSAAV HHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]