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The map label for this gene is exeC [H]

Identifier: 167626080

GI number: 167626080

Start: 5075764

End: 5076681

Strand: Reverse

Name: exeC [H]

Synonym: Shal_4175

Alternate gene names: 167626080

Gene position: 5076681-5075764 (Counterclockwise)

Preceding gene: 167626087

Following gene: 167626079

Centisome position: 97.13

GC content: 46.62

Gene sequence:

>918_bases
ATGGATTTATTCGATAAATTTTTAACTAAAGCGGCTGGAGTGCCTCAAAAACCAGTCAGTACGGCGGTATTTGGCCTAGG
GCTATTGATCGCTCTATATTTGTTAGCACAAATTACTTGGAAGTTAGTTCCAGATAACTCAGCTGCCACACGCTGGGTGC
CGACTCCTGTGGCAAGCAATGCTAGCGGTCAAGTCAACATTCTCGGTTTACAACAACTCTCCCTTTTTGGTCAGCCTGAT
GCCGCGGGTGCTAAGCCTAAAGCCGCTCCGGTTGAAGAGATCATTACCGATGCCCCTAAAACCTCTTTATCTATCCAGCT
GACTGGCGTAGTAGCATCGACTACTGAACAGAAAGGCTTAGCGGTTATTGCTTCAAGCGGTAGCCAAGATACCTACGGTT
TAGGTGACAAGATCAGAGGCACGTCGGCCTCGTTAAAAGAGGTCTACGCCGACCGAATTATTATCACTAATAGCGGTCGC
TACGAGACCTTGATGTTAGATGGTCTAGAATATAATACTAACGGCGCGGCTAATCAGCACTTGCAAAAAGCCAAGAGCGT
TTCTAAAGGTAAGACTATCGACAACCGTAAGAATCGTGCCGTGGCTGCTGAGTTAAGTCAGTCTCGCGAAGAGATCTTAG
CCGATCCGAGTAAGATCACCGATTATCTGTCTATTTCACCGGTTAAGAGCGGTGGAGAGCTAGCGGGTTACCGTCTCAAT
CCGGGTAAAGATCGTGAACTATTTAAGCAAGCAGGTTTTAAAGCGAATGATTTAGCTAAATCGATTAATGGCTATGACTT
GACCGATATGGGGCAGGCATTAGAAGTCATGGCGCAGCTGCCGGAGATGACAGAAGTCGCCTTAATGGTTGAGCGTGATG
GTCAGTTGATAGAGATAATGTTTAGTCTGCCAGAGTAA

Upstream 100 bases:

>100_bases
TTATGGGCTTGTTGCCAAAAGCAGTGTAGGTTAGCATGAGTCAGGATTTGCTAAATTATCATAATCAGAACAGAGGCCTG
CAAAGAGGGTCCACTTAAAT

Downstream 100 bases:

>100_bases
TCGCAGCGGGAAATAACAATAGAATTTGCAGTAATACCAATTGAGTTTGCCGCAACGGAAGGTTTTAGGGGAAGAATAGC
AATGAATAATAAGCGGATTA

Product: general secretion pathway protein C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MDLFDKFLTKAAGVPQKPVSTAVFGLGLLIALYLLAQITWKLVPDNSAATRWVPTPVASNASGQVNILGLQQLSLFGQPD
AAGAKPKAAPVEEIITDAPKTSLSIQLTGVVASTTEQKGLAVIASSGSQDTYGLGDKIRGTSASLKEVYADRIIITNSGR
YETLMLDGLEYNTNGAANQHLQKAKSVSKGKTIDNRKNRAVAAELSQSREEILADPSKITDYLSISPVKSGGELAGYRLN
PGKDRELFKQAGFKANDLAKSINGYDLTDMGQALEVMAQLPEMTEVALMVERDGQLIEIMFSLPE

Sequences:

>Translated_305_residues
MDLFDKFLTKAAGVPQKPVSTAVFGLGLLIALYLLAQITWKLVPDNSAATRWVPTPVASNASGQVNILGLQQLSLFGQPD
AAGAKPKAAPVEEIITDAPKTSLSIQLTGVVASTTEQKGLAVIASSGSQDTYGLGDKIRGTSASLKEVYADRIIITNSGR
YETLMLDGLEYNTNGAANQHLQKAKSVSKGKTIDNRKNRAVAAELSQSREEILADPSKITDYLSISPVKSGGELAGYRLN
PGKDRELFKQAGFKANDLAKSINGYDLTDMGQALEVMAQLPEMTEVALMVERDGQLIEIMFSLPE
>Mature_305_residues
MDLFDKFLTKAAGVPQKPVSTAVFGLGLLIALYLLAQITWKLVPDNSAATRWVPTPVASNASGQVNILGLQQLSLFGQPD
AAGAKPKAAPVEEIITDAPKTSLSIQLTGVVASTTEQKGLAVIASSGSQDTYGLGDKIRGTSASLKEVYADRIIITNSGR
YETLMLDGLEYNTNGAANQHLQKAKSVSKGKTIDNRKNRAVAAELSQSREEILADPSKITDYLSISPVKSGGELAGYRLN
PGKDRELFKQAGFKANDLAKSINGYDLTDMGQALEVMAQLPEMTEVALMVERDGQLIEIMFSLPE

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG3031

COG function: function code U; Type II secretory pathway, component PulC

Gene ontology:

Cell location: Cell inner membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP C family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001639 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32602; Mature: 32602

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLFDKFLTKAAGVPQKPVSTAVFGLGLLIALYLLAQITWKLVPDNSAATRWVPTPVASN
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCCCCC
ASGQVNILGLQQLSLFGQPDAAGAKPKAAPVEEIITDAPKTSLSIQLTGVVASTTEQKGL
CCCEEEEEEHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEEEEEECCCCCCE
AVIASSGSQDTYGLGDKIRGTSASLKEVYADRIIITNSGRYETLMLDGLEYNTNGAANQH
EEEECCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEECCCCEEEEEEECEEECCCCCHHHH
LQKAKSVSKGKTIDNRKNRAVAAELSQSREEILADPSKITDYLSISPVKSGGELAGYRLN
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHEEECCCCCCCCEECEECC
PGKDRELFKQAGFKANDLAKSINGYDLTDMGQALEVMAQLPEMTEVALMVERDGQLIEIM
CCCCHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHEEEEEECCCCEEEEE
FSLPE
EECCC
>Mature Secondary Structure
MDLFDKFLTKAAGVPQKPVSTAVFGLGLLIALYLLAQITWKLVPDNSAATRWVPTPVASN
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCCCCC
ASGQVNILGLQQLSLFGQPDAAGAKPKAAPVEEIITDAPKTSLSIQLTGVVASTTEQKGL
CCCEEEEEEHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEEEEEECCCCCCE
AVIASSGSQDTYGLGDKIRGTSASLKEVYADRIIITNSGRYETLMLDGLEYNTNGAANQH
EEEECCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEECCCCEEEEEEECEEECCCCCHHHH
LQKAKSVSKGKTIDNRKNRAVAAELSQSREEILADPSKITDYLSISPVKSGGELAGYRLN
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHEEECCCCCCCCEECEECC
PGKDRELFKQAGFKANDLAKSINGYDLTDMGQALEVMAQLPEMTEVALMVERDGQLIEIM
CCCCHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHEEEEEECCCCEEEEE
FSLPE
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA