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The map label for this gene is exeN [H]

Identifier: 167626069

GI number: 167626069

Start: 5065067

End: 5065810

Strand: Reverse

Name: exeN [H]

Synonym: Shal_4164

Alternate gene names: 167626069

Gene position: 5065810-5065067 (Counterclockwise)

Preceding gene: 167626070

Following gene: 167626067

Centisome position: 96.92

GC content: 45.83

Gene sequence:

>744_bases
ATGATTGCACTGGGCTTTTTAGTCTACTTAGTTTTTTTAGTGGTGTTATTTCCGGCAAGTGTCGCTGTAAAGCTGGCCCC
CTTGCCAAAGAATGTGGCTATTAGTGGTGTATCTGGCACGGTTTGGGCGGGCAAAATAGATATGCTGAGTGTGCAGAAGC
GCCAAGTGGAGATGATAAGCTGGGATCTTAATGTTTGGTCTTTACTGACTGGCACCGTTAAGGCCGATGTGGTTATTGGG
AGCAGAGCCAGCGCGGTAAACGGTAAGGGAACAGTAGCCTATTCACTAAGCGGTTTAGATGTCAGTGGCTTAAGATTTGA
GGCGCCGAGTAGCTTCTTGTTAGGACGTACTAACTTACCTTTTAGAACCAAAGTAAATGGTGACTTAAGTGTGTTGGTTG
ATAACTTTGAGCAAGGCTTACCTTGGTGTGAACAGCTATCGGGCAAGTTGTTTTTGAACCAAGTCAATGTGACTAACCAG
TTCGGTAAGTACCCGTTAGGGGATATCGCACTGGGTCTGGCTTGTCTCGACGGTAAAGTTGAACTGACAACAGATGAAAA
GCTTAATGCTTTAGGCCTTGATGGCAGCATCGTATTAGCCGATAACAAGATGGTACAAGTGAATGCTAAGATCCGCGAAG
TAAGCACTCAGCCAGATGACTTGAAGAAGGCGCTATCTTTCTTAGGCAAGAAGGACAGCCAAGGCTATTACCCGCTCACC
TATCAAGGTCGATTACCTATCTAG

Upstream 100 bases:

>100_bases
GTTAGAAAGTATAGACTTAGCCGAGTCTGACACCCCAGGTTACGTTAATGTTCGTCGTATTCAGTTGTCCAAGTAAGGTG
TTGTAGTGAAATTAGCAAAA

Downstream 100 bases:

>100_bases
TTCTTATATCAATCGGTATTAATGAAAAGGCGCTTATACAGCGCCTTTTTGTTGATTACTTTTGCAAAAGTAGTTCATCT
AGCAGGTAGTGATAATCTTC

Product: type II secretion system protein N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MIALGFLVYLVFLVVLFPASVAVKLAPLPKNVAISGVSGTVWAGKIDMLSVQKRQVEMISWDLNVWSLLTGTVKADVVIG
SRASAVNGKGTVAYSLSGLDVSGLRFEAPSSFLLGRTNLPFRTKVNGDLSVLVDNFEQGLPWCEQLSGKLFLNQVNVTNQ
FGKYPLGDIALGLACLDGKVELTTDEKLNALGLDGSIVLADNKMVQVNAKIREVSTQPDDLKKALSFLGKKDSQGYYPLT
YQGRLPI

Sequences:

>Translated_247_residues
MIALGFLVYLVFLVVLFPASVAVKLAPLPKNVAISGVSGTVWAGKIDMLSVQKRQVEMISWDLNVWSLLTGTVKADVVIG
SRASAVNGKGTVAYSLSGLDVSGLRFEAPSSFLLGRTNLPFRTKVNGDLSVLVDNFEQGLPWCEQLSGKLFLNQVNVTNQ
FGKYPLGDIALGLACLDGKVELTTDEKLNALGLDGSIVLADNKMVQVNAKIREVSTQPDDLKKALSFLGKKDSQGYYPLT
YQGRLPI
>Mature_247_residues
MIALGFLVYLVFLVVLFPASVAVKLAPLPKNVAISGVSGTVWAGKIDMLSVQKRQVEMISWDLNVWSLLTGTVKADVVIG
SRASAVNGKGTVAYSLSGLDVSGLRFEAPSSFLLGRTNLPFRTKVNGDLSVLVDNFEQGLPWCEQLSGKLFLNQVNVTNQ
FGKYPLGDIALGLACLDGKVELTTDEKLNALGLDGSIVLADNKMVQVNAKIREVSTQPDDLKKALSFLGKKDSQGYYPLT
YQGRLPI

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP N family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022792
- InterPro:   IPR000645 [H]

Pfam domain/function: PF01203 GSPII_N [H]

EC number: NA

Molecular weight: Translated: 26622; Mature: 26622

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALGFLVYLVFLVVLFPASVAVKLAPLPKNVAISGVSGTVWAGKIDMLSVQKRQVEMIS
CCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCEEEECEEEEEEHHHHEEEEEE
WDLNVWSLLTGTVKADVVIGSRASAVNGKGTVAYSLSGLDVSGLRFEAPSSFLLGRTNLP
ECCCHHHHEECCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEECCCCC
FRTKVNGDLSVLVDNFEQGLPWCEQLSGKLFLNQVNVTNQFGKYPLGDIALGLACLDGKV
EEEECCCCCEEEEECHHHCCCHHHHCCCEEEEEEECCCHHCCCCCCHHHHEEEEEECCEE
ELTTDEKLNALGLDGSIVLADNKMVQVNAKIREVSTQPDDLKKALSFLGKKDSQGYYPLT
EEECCCCCEEECCCCEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEE
YQGRLPI
ECCCCCC
>Mature Secondary Structure
MIALGFLVYLVFLVVLFPASVAVKLAPLPKNVAISGVSGTVWAGKIDMLSVQKRQVEMIS
CCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCEEEECEEEEEEHHHHEEEEEE
WDLNVWSLLTGTVKADVVIGSRASAVNGKGTVAYSLSGLDVSGLRFEAPSSFLLGRTNLP
ECCCHHHHEECCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEECCCCC
FRTKVNGDLSVLVDNFEQGLPWCEQLSGKLFLNQVNVTNQFGKYPLGDIALGLACLDGKV
EEEECCCCCEEEEECHHHCCCHHHHCCCEEEEEEECCCHHCCCCCCHHHHEEEEEECCEE
ELTTDEKLNALGLDGSIVLADNKMVQVNAKIREVSTQPDDLKKALSFLGKKDSQGYYPLT
EEECCCCCEEECCCCEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEE
YQGRLPI
ECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8407845 [H]