Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623761

Identifier: 167623761

GI number: 167623761

Start: 2188151

End: 2189026

Strand: Direct

Name: 167623761

Synonym: Shal_1831

Alternate gene names: NA

Gene position: 2188151-2189026 (Clockwise)

Preceding gene: 167623760

Following gene: 167623762

Centisome position: 41.86

GC content: 45.21

Gene sequence:

>876_bases
ATGCGCTTAGCCTGCGATCCCGATAATGAAATAACGATTAAGTTGCCCCATATCACGTTAGCGGCACGATTATGGGGGGC
GCAAGACAAGCCCGTGATTCTTGCATTACATGGTTGGTTAGATAACGCTAATAGCTTTGAGCCATTGAGCCAATATTTAA
CCGATTATCAAATCTTAGCGGTAGATTGGCCTGGGCATGGTGCATCGCAGCATCGCCCTGGTGCCTATCCTCTGCATTGG
GTAGACTATCTCTATGATTTAGATGCTCTGCTTGAAGCACTGCCTATTGAGCAAAAGCCCCATGCTATTTTAGGTCATTC
ATTGGGCGGTATTATCGCCTCGGCTTATACCGCAGCATTTCCTGATAAAGTCAGTAATTTGTTGTTGATTGAAGCGCTCT
CGCCGCTGTATGAGGGTGAGTCAAAATCAAAAAAACGCCTACAAAATAGCTTTTCAGATCACAGGCGTTATCTCTCAAAC
TTGGCAAAGCCTGTAAAGTTCCATCGGGATATTGCCCTAGCAGCTTATGCACGGCACAAATTAACGGCACTAGACCTGCA
ATGGTGCGAATTATTGACTCAGCGCAATATGCAAAACCTTGATTCTGGGGTATGCTGGCGCAGTGATCCTCGCTTAAAAT
TAGATTCCCCTTTAAGACTGACTTATTCTCAAGTCGATGCCTTAATGCAAGCCCATAAAGTCAATACTCTATTAATTTCT
GGTAGCCGAGGTTTCCCCCAGTTACGAGAAGCGATCCCAATGGCGAATCGCTGGTTTGACCAATTACAAACAATAGAGCT
TGAGGGCGACCATCACCTTCATATGGGGAATGCTGAAAAGGTGTCTGCAGCGATCCGTGCTTTCTTAAATAGATAA

Upstream 100 bases:

>100_bases
CTCCAAGACTTGCCCTTGATGAACAAGATAAACAAAAGTATCTCGCGATAGGTGAAAGCGATAGAATGACGCTGAAATTT
ATCAAAAAGTAAGAGTAGAG

Downstream 100 bases:

>100_bases
GCAGAAAAAGAGACTAGGTTTTTTGTTTCATTTATGTGATGATAATCAAAATTTAAACGCTCGTATGATTTAATGCGTGC
TCAATAAATATAAAGAATAG

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: Hydrolase; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase; Hydrolase Alpha/Beta Fold Family; Hydrolase/Acyltransferase; Alpha/Beta Hydrolase Fold Protein; Beta-Ketoacyl Synthase; Lipase A; Lipase; Polyketide Synthase; Hydrolase Protein; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase Family Protein; Alpha/Beta Fold Superfamily Hydrolase; Epoxide Hydrolase; Alpha/Beta Superfamily Hydrolase; Hydrolase Or Acytransferase; Alpha/Beta Fold Hydrolase Family Protein; Alpha/Beta Hydrolase Fold Family; Lipase LipA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MRLACDPDNEITIKLPHITLAARLWGAQDKPVILALHGWLDNANSFEPLSQYLTDYQILAVDWPGHGASQHRPGAYPLHW
VDYLYDLDALLEALPIEQKPHAILGHSLGGIIASAYTAAFPDKVSNLLLIEALSPLYEGESKSKKRLQNSFSDHRRYLSN
LAKPVKFHRDIALAAYARHKLTALDLQWCELLTQRNMQNLDSGVCWRSDPRLKLDSPLRLTYSQVDALMQAHKVNTLLIS
GSRGFPQLREAIPMANRWFDQLQTIELEGDHHLHMGNAEKVSAAIRAFLNR

Sequences:

>Translated_291_residues
MRLACDPDNEITIKLPHITLAARLWGAQDKPVILALHGWLDNANSFEPLSQYLTDYQILAVDWPGHGASQHRPGAYPLHW
VDYLYDLDALLEALPIEQKPHAILGHSLGGIIASAYTAAFPDKVSNLLLIEALSPLYEGESKSKKRLQNSFSDHRRYLSN
LAKPVKFHRDIALAAYARHKLTALDLQWCELLTQRNMQNLDSGVCWRSDPRLKLDSPLRLTYSQVDALMQAHKVNTLLIS
GSRGFPQLREAIPMANRWFDQLQTIELEGDHHLHMGNAEKVSAAIRAFLNR
>Mature_291_residues
MRLACDPDNEITIKLPHITLAARLWGAQDKPVILALHGWLDNANSFEPLSQYLTDYQILAVDWPGHGASQHRPGAYPLHW
VDYLYDLDALLEALPIEQKPHAILGHSLGGIIASAYTAAFPDKVSNLLLIEALSPLYEGESKSKKRLQNSFSDHRRYLSN
LAKPVKFHRDIALAAYARHKLTALDLQWCELLTQRNMQNLDSGVCWRSDPRLKLDSPLRLTYSQVDALMQAHKVNTLLIS
GSRGFPQLREAIPMANRWFDQLQTIELEGDHHLHMGNAEKVSAAIRAFLNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI18777795, Length=305, Percent_Identity=27.5409836065574, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI17137390, Length=308, Percent_Identity=29.5454545454545, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24655874, Length=298, Percent_Identity=28.1879194630872, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24667992, Length=305, Percent_Identity=26.2295081967213, Blast_Score=95, Evalue=6e-20,
Organism=Drosophila melanogaster, GI21357291, Length=302, Percent_Identity=26.158940397351, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24667999, Length=303, Percent_Identity=25.7425742574257, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24655886, Length=291, Percent_Identity=25.7731958762887, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI21356953, Length=295, Percent_Identity=25.0847457627119, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21356937, Length=294, Percent_Identity=22.4489795918367, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32892; Mature: 32892

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLACDPDNEITIKLPHITLAARLWGAQDKPVILALHGWLDNANSFEPLSQYLTDYQILA
CCCCCCCCCCEEEEECCEEEEHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCEEEEE
VDWPGHGASQHRPGAYPLHWVDYLYDLDALLEALPIEQKPHAILGHSLGGIIASAYTAAF
EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC
PDKVSNLLLIEALSPLYEGESKSKKRLQNSFSDHRRYLSNLAKPVKFHRDIALAAYARHK
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTALDLQWCELLTQRNMQNLDSGVCWRSDPRLKLDSPLRLTYSQVDALMQAHKVNTLLIS
HHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCEEEEE
GSRGFPQLREAIPMANRWFDQLQTIELEGDHHLHMGNAEKVSAAIRAFLNR
CCCCCHHHHHHCCHHHHHHHHHEEEEECCCCEEECCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLACDPDNEITIKLPHITLAARLWGAQDKPVILALHGWLDNANSFEPLSQYLTDYQILA
CCCCCCCCCCEEEEECCEEEEHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCEEEEE
VDWPGHGASQHRPGAYPLHWVDYLYDLDALLEALPIEQKPHAILGHSLGGIIASAYTAAF
EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC
PDKVSNLLLIEALSPLYEGESKSKKRLQNSFSDHRRYLSNLAKPVKFHRDIALAAYARHK
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTALDLQWCELLTQRNMQNLDSGVCWRSDPRLKLDSPLRLTYSQVDALMQAHKVNTLLIS
HHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCEEEEE
GSRGFPQLREAIPMANRWFDQLQTIELEGDHHLHMGNAEKVSAAIRAFLNR
CCCCCHHHHHHCCHHHHHHHHHEEEEECCCCEEECCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA