Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623760

Identifier: 167623760

GI number: 167623760

Start: 2187309

End: 2188142

Strand: Direct

Name: 167623760

Synonym: Shal_1830

Alternate gene names: NA

Gene position: 2187309-2188142 (Clockwise)

Preceding gene: 167623759

Following gene: 167623761

Centisome position: 41.85

GC content: 43.17

Gene sequence:

>834_bases
ATGAAAAAGAAAATGTTAACGGTAAGTATTTTGCTCGCAAGCACTTGTAGCTTATCGTTATTAAGCACAACGGCAATTGC
CCATGTTCATCAAAACACTTCTCTAGAATCCGCTATTACTAGTGATTTTAGACAGGCTAAAAATACTACTCGCGATGAGT
ATCGTCACCCAGAGCAAACCCTCACCTTCTTTGATATCCAACCTTCCGATACCGTTATTGAGCTTTGGCCTGGCGGTGGG
TGGTATGCTGAAATTATCGCGCCCTATTTAGCCGATAAAGGCCAATATATTGCGGGAAATTTTGATACTAATCCAGCCGA
TGAGAAGGCGCGTAACGGCTATCGTCCTAAAGCGGGTAAGAGCTTTGAAAAGTGGCTCGAAGATAATAGTGCCAAGCTAG
GTAGTGCCAGTACTGTCACCTTTGATCCCCCTGCTTACTATGTAATGGGAGCAGACAATAGTGCCGATGCAGTGCTCACC
TTCAGAAACTTGCATAACTGGGCGATGAAGGGTTATCTAGAGCCTGTATTTGACTCAGCTTATAAAGTCTTAAAGCCCGG
TGGAATCTTTGGTATCGTTGAGCATCGTTCTAATCCCGGAATGGATGTGAAAACGGGGTATATGAGTCAAGCGGAGGTAA
TAAAACTTGCCGAAAAAGTTGGCTTTACACTTGTCGCCAGTTCAGAAATCAATGCCAATGCAAAAGACACTAAGGATTAT
CCAAAGGGCGTTTGGACACTTCCTCCAAGACTTGCCCTTGATGAACAAGATAAACAAAAGTATCTCGCGATAGGTGAAAG
CGATAGAATGACGCTGAAATTTATCAAAAAGTAA

Upstream 100 bases:

>100_bases
TTTCTTACTCAAATAGTAAATTGTAAATCTCTGTTTATACGGGTTGGTTTTTTGTTAACCGACTGCTAGGTTGATGGCTG
TCAACTTAGGGAGATTTATA

Downstream 100 bases:

>100_bases
GAGTAGAGATGCGCTTAGCCTGCGATCCCGATAATGAAATAACGATTAAGTTGCCCCATATCACGTTAGCGGCACGATTA
TGGGGGGCGCAAGACAAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKKKMLTVSILLASTCSLSLLSTTAIAHVHQNTSLESAITSDFRQAKNTTRDEYRHPEQTLTFFDIQPSDTVIELWPGGG
WYAEIIAPYLADKGQYIAGNFDTNPADEKARNGYRPKAGKSFEKWLEDNSAKLGSASTVTFDPPAYYVMGADNSADAVLT
FRNLHNWAMKGYLEPVFDSAYKVLKPGGIFGIVEHRSNPGMDVKTGYMSQAEVIKLAEKVGFTLVASSEINANAKDTKDY
PKGVWTLPPRLALDEQDKQKYLAIGESDRMTLKFIKK

Sequences:

>Translated_277_residues
MKKKMLTVSILLASTCSLSLLSTTAIAHVHQNTSLESAITSDFRQAKNTTRDEYRHPEQTLTFFDIQPSDTVIELWPGGG
WYAEIIAPYLADKGQYIAGNFDTNPADEKARNGYRPKAGKSFEKWLEDNSAKLGSASTVTFDPPAYYVMGADNSADAVLT
FRNLHNWAMKGYLEPVFDSAYKVLKPGGIFGIVEHRSNPGMDVKTGYMSQAEVIKLAEKVGFTLVASSEINANAKDTKDY
PKGVWTLPPRLALDEQDKQKYLAIGESDRMTLKFIKK
>Mature_277_residues
MKKKMLTVSILLASTCSLSLLSTTAIAHVHQNTSLESAITSDFRQAKNTTRDEYRHPEQTLTFFDIQPSDTVIELWPGGG
WYAEIIAPYLADKGQYIAGNFDTNPADEKARNGYRPKAGKSFEKWLEDNSAKLGSASTVTFDPPAYYVMGADNSADAVLT
FRNLHNWAMKGYLEPVFDSAYKVLKPGGIFGIVEHRSNPGMDVKTGYMSQAEVIKLAEKVGFTLVASSEINANAKDTKDY
PKGVWTLPPRLALDEQDKQKYLAIGESDRMTLKFIKK

Specific function: Unknown

COG id: COG4798

COG function: function code R; Predicted methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30762; Mature: 30762

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKMLTVSILLASTCSLSLLSTTAIAHVHQNTSLESAITSDFRQAKNTTRDEYRHPEQT
CCCCEEEEEEEHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCCE
LTFFDIQPSDTVIELWPGGGWYAEIIAPYLADKGQYIAGNFDTNPADEKARNGYRPKAGK
EEEEEECCCCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCHHHHCCCCCCCCC
SFEKWLEDNSAKLGSASTVTFDPPAYYVMGADNSADAVLTFRNLHNWAMKGYLEPVFDSA
HHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHH
YKVLKPGGIFGIVEHRSNPGMDVKTGYMSQAEVIKLAEKVGFTLVASSEINANAKDTKDY
HHHHCCCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC
PKGVWTLPPRLALDEQDKQKYLAIGESDRMTLKFIKK
CCCEEECCCCCCCCCCCCCEEEEECCCCCEEEEEECC
>Mature Secondary Structure
MKKKMLTVSILLASTCSLSLLSTTAIAHVHQNTSLESAITSDFRQAKNTTRDEYRHPEQT
CCCCEEEEEEEHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCCE
LTFFDIQPSDTVIELWPGGGWYAEIIAPYLADKGQYIAGNFDTNPADEKARNGYRPKAGK
EEEEEECCCCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCHHHHCCCCCCCCC
SFEKWLEDNSAKLGSASTVTFDPPAYYVMGADNSADAVLTFRNLHNWAMKGYLEPVFDSA
HHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHH
YKVLKPGGIFGIVEHRSNPGMDVKTGYMSQAEVIKLAEKVGFTLVASSEINANAKDTKDY
HHHHCCCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC
PKGVWTLPPRLALDEQDKQKYLAIGESDRMTLKFIKK
CCCEEECCCCCCCCCCCCCEEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA