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The map label for this gene is pheS [H]

Identifier: 167623742

GI number: 167623742

Start: 2167940

End: 2168926

Strand: Direct

Name: pheS [H]

Synonym: Shal_1812

Alternate gene names: 167623742

Gene position: 2167940-2168926 (Clockwise)

Preceding gene: 167623739

Following gene: 167623743

Centisome position: 41.48

GC content: 44.78

Gene sequence:

>987_bases
ATGATGTCACAGTTAACAGAGATCGTAGAACAGGCTTTAGCCGCCATCGAAGGAGCTACAGATTTAAAAGCTCTCGATGA
CCTCCGTGTCGATTACCTTGGTAAGAAAGGTCAAATCACCGACATGATGAAAATGATGGGGAAACTGCCTCCAGAAGAGA
AGCCAGCTTTTGGTCAAGCCGTGAATCAAGCGAAACAAGCGGTTCAACAACAGTTATCTATTCGCATTGATGGTCTGAAG
GCCGCTGAACTTGAAGCTCAGTTAAAAGCAGAGAGTATCGACGTGAGCTTGCCTGGCCGTCGTATCGAGAACGGTGGATT
ACACCCTGTAACTCGTACGATTGAGCGTATTGAAGCTTTCTTTGGTGAGCTTGGCTTTACGGTTAAAGACGGCCCAGAAA
TCGAAGATGATTTTCATAACTTCGATGCGTTAAACATCTCTGAGCACCATCCTGCTCGTGCGGATCATGACACTTTCTAT
TTTAACCCGAAAGTGATGTTGCGTACGCAAACCTCTGGCGTACAGATCCGTACTATGGAGCACGAGAAGCCGCCTTTACG
TATTATCTCTCCAGGTCGCGTATATCGTAACGATTATGACCAAACACATACGCCGATGTTCCATCAGGTGGAAGGTTTAC
TTGTCGCTGAGAACGTTAACTTTGCTGAATTAAAAGGCATCTTGCACGATTTTCTACGTAATTTCTTTGAAGAAGACTTA
GAAGTCCGTTTCCGTCCTTCTTATTTCCCATTTACTGAGCCTTCTGCAGAAGTGGATGTAATGGGGAAAAATGGTAAGTG
GCTAGAAGTACTAGGCTGCGGCATGGTTCATCCAAATGTGCTTCGTAGTGTTGGAATCGATCCAGAGAAATATTCTGGCT
TTGCATTCGGTATGGGCGTTGAGCGTCTTTCTATGTTGCGCTATGGCGTTAACGATCTGCGTTCATTCTTCGAAAACGAT
CTACGTTTCCTGAAGCAATTTAAATAA

Upstream 100 bases:

>100_bases
TGTCGCTGTCTAACGTAAAATTTTAGTCTTTTTCTATTTTCACTAAGAAAATACGTTAGCCCAAAAGTCGTAGGTCTAGC
ACTTACTTGCACTGGAAGAG

Downstream 100 bases:

>100_bases
ACGGAGCTGTAATAGCATGAAATTTAGCGAATCTTGGCTTCGTGAGTGGGTTAACCCTAGTGTCAATCGCGAAGAGTTAT
CACACCAAATTACTATGGCT

Product: phenylalanyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Phenylalanine--tRNA ligase alpha chain; PheRS [H]

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MMSQLTEIVEQALAAIEGATDLKALDDLRVDYLGKKGQITDMMKMMGKLPPEEKPAFGQAVNQAKQAVQQQLSIRIDGLK
AAELEAQLKAESIDVSLPGRRIENGGLHPVTRTIERIEAFFGELGFTVKDGPEIEDDFHNFDALNISEHHPARADHDTFY
FNPKVMLRTQTSGVQIRTMEHEKPPLRIISPGRVYRNDYDQTHTPMFHQVEGLLVAENVNFAELKGILHDFLRNFFEEDL
EVRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRSVGIDPEKYSGFAFGMGVERLSMLRYGVNDLRSFFEND
LRFLKQFK

Sequences:

>Translated_328_residues
MMSQLTEIVEQALAAIEGATDLKALDDLRVDYLGKKGQITDMMKMMGKLPPEEKPAFGQAVNQAKQAVQQQLSIRIDGLK
AAELEAQLKAESIDVSLPGRRIENGGLHPVTRTIERIEAFFGELGFTVKDGPEIEDDFHNFDALNISEHHPARADHDTFY
FNPKVMLRTQTSGVQIRTMEHEKPPLRIISPGRVYRNDYDQTHTPMFHQVEGLLVAENVNFAELKGILHDFLRNFFEEDL
EVRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRSVGIDPEKYSGFAFGMGVERLSMLRYGVNDLRSFFEND
LRFLKQFK
>Mature_328_residues
MMSQLTEIVEQALAAIEGATDLKALDDLRVDYLGKKGQITDMMKMMGKLPPEEKPAFGQAVNQAKQAVQQQLSIRIDGLK
AAELEAQLKAESIDVSLPGRRIENGGLHPVTRTIERIEAFFGELGFTVKDGPEIEDDFHNFDALNISEHHPARADHDTFY
FNPKVMLRTQTSGVQIRTMEHEKPPLRIISPGRVYRNDYDQTHTPMFHQVEGLLVAENVNFAELKGILHDFLRNFFEEDL
EVRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRSVGIDPEKYSGFAFGMGVERLSMLRYGVNDLRSFFEND
LRFLKQFK

Specific function: Unknown

COG id: COG0016

COG function: function code J; Phenylalanyl-tRNA synthetase alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha chain type 1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI5729820, Length=274, Percent_Identity=33.2116788321168, Blast_Score=132, Evalue=3e-31,
Organism=Homo sapiens, GI4758340, Length=259, Percent_Identity=32.4324324324324, Blast_Score=125, Evalue=6e-29,
Organism=Escherichia coli, GI1788007, Length=327, Percent_Identity=75.8409785932722, Blast_Score=532, Evalue=1e-152,
Organism=Caenorhabditis elegans, GI32566635, Length=245, Percent_Identity=35.1020408163265, Blast_Score=133, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI32563657, Length=260, Percent_Identity=30.3846153846154, Blast_Score=123, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17508957, Length=260, Percent_Identity=30.3846153846154, Blast_Score=123, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6321087, Length=369, Percent_Identity=28.1842818428184, Blast_Score=134, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6325304, Length=337, Percent_Identity=25.8160237388724, Blast_Score=103, Evalue=3e-23,
Organism=Drosophila melanogaster, GI18858079, Length=284, Percent_Identity=30.2816901408451, Blast_Score=121, Evalue=6e-28,
Organism=Drosophila melanogaster, GI17137424, Length=280, Percent_Identity=28.9285714285714, Blast_Score=110, Evalue=2e-24,

Paralogues:

None

Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006195
- InterPro:   IPR004529
- InterPro:   IPR004188
- InterPro:   IPR022911
- InterPro:   IPR002319
- InterPro:   IPR010978 [H]

Pfam domain/function: PF02912 Phe_tRNA-synt_N; PF01409 tRNA-synt_2d [H]

EC number: =6.1.1.20 [H]

Molecular weight: Translated: 37278; Mature: 37278

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS50862 AA_TRNA_LIGASE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSQLTEIVEQALAAIEGATDLKALDDLRVDYLGKKGQITDMMKMMGKLPPEEKPAFGQA
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHH
VNQAKQAVQQQLSIRIDGLKAAELEAQLKAESIDVSLPGRRIENGGLHPVTRTIERIEAF
HHHHHHHHHHHHHEEECCCCHHHHHHHHHHCEEEEECCCCCCCCCCCCHHHHHHHHHHHH
FGELGFTVKDGPEIEDDFHNFDALNISEHHPARADHDTFYFNPKVMLRTQTSGVQIRTME
HHHCCCEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCEEEEEEC
HEKPPLRIISPGRVYRNDYDQTHTPMFHQVEGLLVAENVNFAELKGILHDFLRNFFEEDL
CCCCCEEEECCCHHHCCCCCCCCCCHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHCC
EVRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRSVGIDPEKYSGFAFGMGV
CEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCHHHHHHCCCCHHHCCCEEEHHHH
ERLSMLRYGVNDLRSFFENDLRFLKQFK
HHHHHHHHCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMSQLTEIVEQALAAIEGATDLKALDDLRVDYLGKKGQITDMMKMMGKLPPEEKPAFGQA
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHH
VNQAKQAVQQQLSIRIDGLKAAELEAQLKAESIDVSLPGRRIENGGLHPVTRTIERIEAF
HHHHHHHHHHHHHEEECCCCHHHHHHHHHHCEEEEECCCCCCCCCCCCHHHHHHHHHHHH
FGELGFTVKDGPEIEDDFHNFDALNISEHHPARADHDTFYFNPKVMLRTQTSGVQIRTME
HHHCCCEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCEEEEEEC
HEKPPLRIISPGRVYRNDYDQTHTPMFHQVEGLLVAENVNFAELKGILHDFLRNFFEEDL
CCCCCEEEECCCHHHCCCCCCCCCCHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHCC
EVRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRSVGIDPEKYSGFAFGMGV
CEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCHHHHHHCCCCHHHCCCEEEHHHH
ERLSMLRYGVNDLRSFFENDLRFLKQFK
HHHHHHHHCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA