Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623719

Identifier: 167623719

GI number: 167623719

Start: 2140046

End: 2141083

Strand: Direct

Name: 167623719

Synonym: Shal_1789

Alternate gene names: NA

Gene position: 2140046-2141083 (Clockwise)

Preceding gene: 167623716

Following gene: 167623721

Centisome position: 40.94

GC content: 37.76

Gene sequence:

>1038_bases
ATGAGTATTTATGAAGTGCCAGCAGGTCGGCGATATTGGGTAGTTAGAGCTGAGAGTGGAAAGTTTTACGACCATTTTAT
ACAGAATGGAGTTATAGCTCTTGGGCATCTAAATTGTCTGAATGTGGCTGAGCAAGATACATATATTCCGGACTTAGCTG
AATTGAGTGAACGGTTTCATAATTACCATTTGTCCAAAAACAATAAAAGACAAAGAGCTTCGGTTCATCTAGCTCAATTA
AAATCATTTATTTATGATATGAAAGTAGGTGATTGGGTACTAACTGTTGGCCGTTCGGGGGTTCGATATGGGCGGGTACT
TGGAAAGCCCTATGTCAAAAAAGGTATTGTCCGTGTTACGTATGACGAGGAGACTAATAACTACGTCGATATGGATTATA
ACCTTAGGCGAGAAGTGCAATGGGGACCTTTAGTTAAAAGAAAGCTTTTGCCTTATGGGTTAGTGCAAAGCTTGAAAGCT
AACCAGACTGTTTTCTGTTTAGATAAAAATTGGCAGGCAGTTTATCATTCCATCTATCCTGCATTTAAGTTTGAAAACCA
ACTTTACCTTTCCGCTAATATAAGAACCCAAAAAGATATTAAGAACTATAGTGTTACTTCATTTTTTAAACTGCTTAATG
AAGTTGAAGTGATTGGAAAGGAATTCTCAGAACGACAAGAAATTTCAAATTTTGAACAGGTTTTTGACAGCTATTTGAGC
CAAGATAACCTCACTATCACGACTAAAGCCCAGTTTCATTCTCCTGGGGAGATTTGGAATACTATCCAATCGTTTGTAGG
GCCCGAGAGCCTTGATACTTGGCAGACATATACGGTTTTGGCATATGGGATGATATTTGGAAATCAAAAGTTAGGCTTTG
ATGGCATCATTGATCTTGAAACTAGAAAAAAACTCTGGGACTTAGTGATTGAAAGAATGAAAGTTAATAAAGTTGAAGAG
TCCCTGAAGTCATTAGATTTAGAGTTACCTGATGCTGACACGTCAAAGCTGGAAGACTCTAGCAATGACAAGGTTTAA

Upstream 100 bases:

>100_bases
GCCCTCTTGTTGGCTTGCATGTCATATTGTAAGCTACCTAAGTAAATAAATGATTACATTAAGTTTGTTTGCCAGTCTTT
GTATGTGGATAAGGGATTCT

Downstream 100 bases:

>100_bases
CCTCTCAGTTTTGTCCGCAATTCATTTTTAGTTTGAGCGTTGGTCAACGTTGCTCGTGTGAGTATGTCTAGTTCATTTAA
AGTGAAATAGAGTTCAGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MSIYEVPAGRRYWVVRAESGKFYDHFIQNGVIALGHLNCLNVAEQDTYIPDLAELSERFHNYHLSKNNKRQRASVHLAQL
KSFIYDMKVGDWVLTVGRSGVRYGRVLGKPYVKKGIVRVTYDEETNNYVDMDYNLRREVQWGPLVKRKLLPYGLVQSLKA
NQTVFCLDKNWQAVYHSIYPAFKFENQLYLSANIRTQKDIKNYSVTSFFKLLNEVEVIGKEFSERQEISNFEQVFDSYLS
QDNLTITTKAQFHSPGEIWNTIQSFVGPESLDTWQTYTVLAYGMIFGNQKLGFDGIIDLETRKKLWDLVIERMKVNKVEE
SLKSLDLELPDADTSKLEDSSNDKV

Sequences:

>Translated_345_residues
MSIYEVPAGRRYWVVRAESGKFYDHFIQNGVIALGHLNCLNVAEQDTYIPDLAELSERFHNYHLSKNNKRQRASVHLAQL
KSFIYDMKVGDWVLTVGRSGVRYGRVLGKPYVKKGIVRVTYDEETNNYVDMDYNLRREVQWGPLVKRKLLPYGLVQSLKA
NQTVFCLDKNWQAVYHSIYPAFKFENQLYLSANIRTQKDIKNYSVTSFFKLLNEVEVIGKEFSERQEISNFEQVFDSYLS
QDNLTITTKAQFHSPGEIWNTIQSFVGPESLDTWQTYTVLAYGMIFGNQKLGFDGIIDLETRKKLWDLVIERMKVNKVEE
SLKSLDLELPDADTSKLEDSSNDKV
>Mature_344_residues
SIYEVPAGRRYWVVRAESGKFYDHFIQNGVIALGHLNCLNVAEQDTYIPDLAELSERFHNYHLSKNNKRQRASVHLAQLK
SFIYDMKVGDWVLTVGRSGVRYGRVLGKPYVKKGIVRVTYDEETNNYVDMDYNLRREVQWGPLVKRKLLPYGLVQSLKAN
QTVFCLDKNWQAVYHSIYPAFKFENQLYLSANIRTQKDIKNYSVTSFFKLLNEVEVIGKEFSERQEISNFEQVFDSYLSQ
DNLTITTKAQFHSPGEIWNTIQSFVGPESLDTWQTYTVLAYGMIFGNQKLGFDGIIDLETRKKLWDLVIERMKVNKVEES
LKSLDLELPDADTSKLEDSSNDKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40067; Mature: 39936

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIYEVPAGRRYWVVRAESGKFYDHFIQNGVIALGHLNCLNVAEQDTYIPDLAELSERFH
CCEEECCCCCEEEEEEECCCCHHHHHHCCCEEEEECCHHHCCCCCCCCCCCHHHHHHHHH
NYHLSKNNKRQRASVHLAQLKSFIYDMKVGDWVLTVGRSGVRYGRVLGKPYVKKGIVRVT
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCHHHHCCCEEEE
YDEETNNYVDMDYNLRREVQWGPLVKRKLLPYGLVQSLKANQTVFCLDKNWQAVYHSIYP
EECCCCCEEECCCCCCCCCCCCHHHHHHHCCHHHHHHHCCCCEEEEECCCHHHHHHHHHH
AFKFENQLYLSANIRTQKDIKNYSVTSFFKLLNEVEVIGKEFSERQEISNFEQVFDSYLS
HEEECCEEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QDNLTITTKAQFHSPGEIWNTIQSFVGPESLDTWQTYTVLAYGMIFGNQKLGFDGIIDLE
CCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEHH
TRKKLWDLVIERMKVNKVEESLKSLDLELPDADTSKLEDSSNDKV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCC
>Mature Secondary Structure 
SIYEVPAGRRYWVVRAESGKFYDHFIQNGVIALGHLNCLNVAEQDTYIPDLAELSERFH
CEEECCCCCEEEEEEECCCCHHHHHHCCCEEEEECCHHHCCCCCCCCCCCHHHHHHHHH
NYHLSKNNKRQRASVHLAQLKSFIYDMKVGDWVLTVGRSGVRYGRVLGKPYVKKGIVRVT
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCHHHHCCCEEEE
YDEETNNYVDMDYNLRREVQWGPLVKRKLLPYGLVQSLKANQTVFCLDKNWQAVYHSIYP
EECCCCCEEECCCCCCCCCCCCHHHHHHHCCHHHHHHHCCCCEEEEECCCHHHHHHHHHH
AFKFENQLYLSANIRTQKDIKNYSVTSFFKLLNEVEVIGKEFSERQEISNFEQVFDSYLS
HEEECCEEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QDNLTITTKAQFHSPGEIWNTIQSFVGPESLDTWQTYTVLAYGMIFGNQKLGFDGIIDLE
CCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEHH
TRKKLWDLVIERMKVNKVEESLKSLDLELPDADTSKLEDSSNDKV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA