Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is acpP [H]

Identifier: 167623708

GI number: 167623708

Start: 2129509

End: 2129742

Strand: Direct

Name: acpP [H]

Synonym: Shal_1778

Alternate gene names: 167623708

Gene position: 2129509-2129742 (Clockwise)

Preceding gene: 167623707

Following gene: 167623709

Centisome position: 40.74

GC content: 41.03

Gene sequence:

>234_bases
ATGAGCAACATCGAAGAACGTGTAAAGAAAATCATCATCGAGCAACTAGGTGTTAAAGAAGAAGACGTTAAATCAGCAGC
ATCTTTCGTTGACGATTTGGGTGCAGATTCTCTAGACACTGTTGAGTTGGTTATGGCTCTAGAAGAAGAGTTTGACACCG
AGATCCCTGATGAAGAAGCTGAGAAGATCACTACTGTTCAAGCAGCGATCGATTACGTTTCTAAGAATCAGTAA

Upstream 100 bases:

>100_bases
TGTGGTTAGACCACGAAATTTGAGCTTGCAATGTCTGTCAAATTCAATAAACTACTCGCAATCTTGCGCAAGTGCGTAAT
TTGAATAGGAAAGAAAACTA

Downstream 100 bases:

>100_bases
TCTAGAATTCTTGAAAACAGGCGGCATTATTGCCGCCTGTTTTTGTTTGTAAAAGCCGCTGGTTGATTTTACGTTTTATC
TTCGCATTTCCAATATTTAC

Product: acyl carrier protein

Products: NA

Alternate protein names: ACP [H]

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MSNIEERVKKIIIEQLGVKEEDVKSAASFVDDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYVSKNQ

Sequences:

>Translated_77_residues
MSNIEERVKKIIIEQLGVKEEDVKSAASFVDDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYVSKNQ
>Mature_76_residues
SNIEERVKKIIIEQLGVKEEDVKSAASFVDDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYVSKNQ

Specific function: Carrier of the growing fatty acid chain in fatty acid biosynthesis [H]

COG id: COG0236

COG function: function code IQ; Acyl carrier protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 acyl carrier domain [H]

Homologues:

Organism=Escherichia coli, GI1787336, Length=77, Percent_Identity=84.4155844155844, Blast_Score=127, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6322656, Length=60, Percent_Identity=46.6666666666667, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003231
- InterPro:   IPR009081
- InterPro:   IPR006163
- InterPro:   IPR006162 [H]

Pfam domain/function: PF00550 PP-binding [H]

EC number: NA

Molecular weight: Translated: 8575; Mature: 8443

Theoretical pI: Translated: 3.76; Mature: 3.76

Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS50075 ACP_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNIEERVKKIIIEQLGVKEEDVKSAASFVDDLGADSLDTVELVMALEEEFDTEIPDEEA
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHH
EKITTVQAAIDYVSKNQ
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNIEERVKKIIIEQLGVKEEDVKSAASFVDDLGADSLDTVELVMALEEEFDTEIPDEEA
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHH
EKITTVQAAIDYVSKNQ
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]