Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is ppsA [H]
Identifier: 167623636
GI number: 167623636
Start: 2046344
End: 2048713
Strand: Direct
Name: ppsA [H]
Synonym: Shal_1705
Alternate gene names: 167623636
Gene position: 2046344-2048713 (Clockwise)
Preceding gene: 167623631
Following gene: 167623637
Centisome position: 39.15
GC content: 45.57
Gene sequence:
>2370_bases GTGCAGCAATACGTACTCTGGTATCAAGAATTAGGCATGGGTGACGTCAACAAGGTAGGCGGTAAGAACGCTTCTCTTGG AGAGATGATTAGCAATCTATCAAACGCAGGCGTTCAAGTGCCTGGTGGATTTGCGACAACATCTTTTGCGTTCAATGAAT TTCTTGAACAAAGTGGACTAAACCAGAAGATATACGAAATTCTAGAAACTCTAGATGTAGATGACGTGAATGCACTCGCT ACAGCAGGAGCACAGATCAGACAGTGGGTTATCGATACCCCGTTCCACCCAGAATTTGAGCAAGCGGTACGTGAGTCTTA CGACAAGCTTAGCTCTGAAACAAATGACGCATCATTTGCAGTTCGCTCTTCAGCAACAGCAGAAGATATGCCAGATGCAT CATTTGCTGGTCAACAAGAAACTTTCCTAAACGTTAAGGGTTATGAAGCCGTGTTAGAAGCAACTAAGCATGTATTTGCT TCTTTGTTTAATGACCGTGCTATTTCATACCGTGTTCACCAAGGTTACGACCATAAAGGCGTCGCACTATCAGCGGGTGT TCAGCGCATGGTGCGTTCAGATAAAGCGGCTTCTGGTGTTATGTTCACCATGGACACTGAGTCTGGCAACAATGACGTGG TATTTATTACTTCTTCATTCGGCCTAGGTGAGATGGTTGTTCAAGGTGCGGTTAACCCTGACGAATTTTATGTTCATAAG CCAACTTTGGTTGCAGGACATAAAGCGGTTGTACGCCGTAACATCGGTAGCAAGCTTATCCAGATGGTGTATTCAGACGA TGAATCTCATGGTAAGCAAGTTAAGATTGAAGATATCGCTGCTGACAAGCGTCGTGAATTCTCAATTAACGATGCTGAAG TACAAGAACTTGCTAAGCAAGCAATGACTATCGAGAAGCACTACGGTCGTCCAATGGACATCGAATGGGCTAAAGACGGT AACGACGGTAAGTTGTATATCGTACAGGCTCGTCCTGAAACTGTTCGTTCTCGTGAAGATGTACAGCTAATTGAACGTTA CCACCTTAAGACTCAAGGTGACGTCGTTTGTGAAGGCCGTGCAATTGGTCACAAGATTGGTAAAGGTGTCGCTAAGGTAC TTAAGTCAATCGAAGACATGGATCAAATTCAACCAGGTGATGTGTTAGTTACCGACATGACGGACCCAGATTGGGAGCCA ATCATGAAGCGTGCAAGCGCGATTGTAACTAACCGTGGTGGCCGTACTTGTCACGCCGCGATTATCGCACGTGAGCTTGG CGTTCCTGCTGTTGTTGGTTGTGGCGACGTAACTGAGCGTATCAAAAATGGCCAAGAGATTACCGTTTCTTGTGCTGAAG GTGACACAGGCCTTATCTACAATGGTCTACAAGACTTTGAAGTGATTTCATCACGTGTAGATTCAATGCCTGAATTGCCA ATGAAGATTACGATGAACGTGGGTAACCCAGACCGCGCATTTGACTTTGCACGTCTACCTAACGAAGGTGTTGGTCTTGC ACGTCTTGAGTTCATCATCAATCGCATGATTGGTATTCACCCTAAAGCATTGCTTGAGTTCAACGACCAAACTGCAGAGC TTCAACAAGAGATCCACGAGATGATCGCGGGTTATGAATCTCCAGTTGAATTTTACGTGGCACGTTTAGTTGAAGGTATT GCAACAATTGCTTCAGCTTTCCACCCGAAGAAAGTCATTGTTCGTATGTCTGACTTTAAGTCAAATGAATACGCAAACTT GGTAGGTGGTGACCGTTACGAGCCAGAGGAAGAAAACCCAATGTTGGGCTTCCGCGGTGCGAGCCGCTATATCTCTGAAT CGTTCCGTGATTGTTTTGCACTAGAGTGTGAAGCGATTAAGCGTGTTCGTAATGAGATGGGCCTTAAAAACGTTGAAATC ATGATCCCATTCGTTCGCACATTGAGCGAAGCAGCGCAGGTGATTGAGCTTCTTAAAGAGCAAGGTCTTGAGCGTGGTAA AGATGGTTTACGCGTTATCATGATGTGTGAGTTGCCTTCAAACGCACTGCTTGCTGAACAGTTCCTTGAGCACTTCGATG GTTTCTCTATCGGCTCAAACGACTTAACGCAGCTAACTCTTGGTCTTGACCGTGACTCAGGCATCATCAGCCATCTATTT GATGAGCGTAATGACGCAGTTAAAGCCTTGCTTTCCATGGCAATTAAAGCGGCAAAAGCTAAGGGCGCATACGTTGGTAT TTGTGGGCAAGGCCCATCAGACCATCCAGACTTTGCGGCTTGGTTGGTTGAGCAAGGCATCGATACTGTATCGCTAAACC CAGATACCGTTATCGATACTTGGTTATACCTAGCTGAAGCTCACGGTTAA
Upstream 100 bases:
>100_bases CAAATAAAATTATACATTTACGCTTCTTGCCATGGAGTGTAAGATGCTGTTGCTCTCGTGTGAAGAGCCACATTAAAATA TACTTGCGGAGATAAGAACT
Downstream 100 bases:
>100_bases TATTATCCATGTAAGCTTATAGTCTAAATGAAGTGTTAAATCTGTGCGATTTAACATTTTGTTAAAAACATGAAAAAAGC CGCTATTTAGCGGCTTTTTT
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 789; Mature: 789
Protein sequence:
>789_residues MQQYVLWYQELGMGDVNKVGGKNASLGEMISNLSNAGVQVPGGFATTSFAFNEFLEQSGLNQKIYEILETLDVDDVNALA TAGAQIRQWVIDTPFHPEFEQAVRESYDKLSSETNDASFAVRSSATAEDMPDASFAGQQETFLNVKGYEAVLEATKHVFA SLFNDRAISYRVHQGYDHKGVALSAGVQRMVRSDKAASGVMFTMDTESGNNDVVFITSSFGLGEMVVQGAVNPDEFYVHK PTLVAGHKAVVRRNIGSKLIQMVYSDDESHGKQVKIEDIAADKRREFSINDAEVQELAKQAMTIEKHYGRPMDIEWAKDG NDGKLYIVQARPETVRSREDVQLIERYHLKTQGDVVCEGRAIGHKIGKGVAKVLKSIEDMDQIQPGDVLVTDMTDPDWEP IMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDVTERIKNGQEITVSCAEGDTGLIYNGLQDFEVISSRVDSMPELP MKITMNVGNPDRAFDFARLPNEGVGLARLEFIINRMIGIHPKALLEFNDQTAELQQEIHEMIAGYESPVEFYVARLVEGI ATIASAFHPKKVIVRMSDFKSNEYANLVGGDRYEPEEENPMLGFRGASRYISESFRDCFALECEAIKRVRNEMGLKNVEI MIPFVRTLSEAAQVIELLKEQGLERGKDGLRVIMMCELPSNALLAEQFLEHFDGFSIGSNDLTQLTLGLDRDSGIISHLF DERNDAVKALLSMAIKAAKAKGAYVGICGQGPSDHPDFAAWLVEQGIDTVSLNPDTVIDTWLYLAEAHG
Sequences:
>Translated_789_residues MQQYVLWYQELGMGDVNKVGGKNASLGEMISNLSNAGVQVPGGFATTSFAFNEFLEQSGLNQKIYEILETLDVDDVNALA TAGAQIRQWVIDTPFHPEFEQAVRESYDKLSSETNDASFAVRSSATAEDMPDASFAGQQETFLNVKGYEAVLEATKHVFA SLFNDRAISYRVHQGYDHKGVALSAGVQRMVRSDKAASGVMFTMDTESGNNDVVFITSSFGLGEMVVQGAVNPDEFYVHK PTLVAGHKAVVRRNIGSKLIQMVYSDDESHGKQVKIEDIAADKRREFSINDAEVQELAKQAMTIEKHYGRPMDIEWAKDG NDGKLYIVQARPETVRSREDVQLIERYHLKTQGDVVCEGRAIGHKIGKGVAKVLKSIEDMDQIQPGDVLVTDMTDPDWEP IMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDVTERIKNGQEITVSCAEGDTGLIYNGLQDFEVISSRVDSMPELP MKITMNVGNPDRAFDFARLPNEGVGLARLEFIINRMIGIHPKALLEFNDQTAELQQEIHEMIAGYESPVEFYVARLVEGI ATIASAFHPKKVIVRMSDFKSNEYANLVGGDRYEPEEENPMLGFRGASRYISESFRDCFALECEAIKRVRNEMGLKNVEI MIPFVRTLSEAAQVIELLKEQGLERGKDGLRVIMMCELPSNALLAEQFLEHFDGFSIGSNDLTQLTLGLDRDSGIISHLF DERNDAVKALLSMAIKAAKAKGAYVGICGQGPSDHPDFAAWLVEQGIDTVSLNPDTVIDTWLYLAEAHG >Mature_789_residues MQQYVLWYQELGMGDVNKVGGKNASLGEMISNLSNAGVQVPGGFATTSFAFNEFLEQSGLNQKIYEILETLDVDDVNALA TAGAQIRQWVIDTPFHPEFEQAVRESYDKLSSETNDASFAVRSSATAEDMPDASFAGQQETFLNVKGYEAVLEATKHVFA SLFNDRAISYRVHQGYDHKGVALSAGVQRMVRSDKAASGVMFTMDTESGNNDVVFITSSFGLGEMVVQGAVNPDEFYVHK PTLVAGHKAVVRRNIGSKLIQMVYSDDESHGKQVKIEDIAADKRREFSINDAEVQELAKQAMTIEKHYGRPMDIEWAKDG NDGKLYIVQARPETVRSREDVQLIERYHLKTQGDVVCEGRAIGHKIGKGVAKVLKSIEDMDQIQPGDVLVTDMTDPDWEP IMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDVTERIKNGQEITVSCAEGDTGLIYNGLQDFEVISSRVDSMPELP MKITMNVGNPDRAFDFARLPNEGVGLARLEFIINRMIGIHPKALLEFNDQTAELQQEIHEMIAGYESPVEFYVARLVEGI ATIASAFHPKKVIVRMSDFKSNEYANLVGGDRYEPEEENPMLGFRGASRYISESFRDCFALECEAIKRVRNEMGLKNVEI MIPFVRTLSEAAQVIELLKEQGLERGKDGLRVIMMCELPSNALLAEQFLEHFDGFSIGSNDLTQLTLGLDRDSGIISHLF DERNDAVKALLSMAIKAAKAKGAYVGICGQGPSDHPDFAAWLVEQGIDTVSLNPDTVIDTWLYLAEAHG
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=782, Percent_Identity=75.4475703324808, Blast_Score=1268, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=448, Percent_Identity=27.4553571428571, Blast_Score=132, Evalue=1e-31, Organism=Escherichia coli, GI1788726, Length=190, Percent_Identity=32.1052631578947, Blast_Score=93, Evalue=6e-20, Organism=Escherichia coli, GI48994992, Length=397, Percent_Identity=25.6926952141058, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1789193, Length=390, Percent_Identity=25.3846153846154, Blast_Score=90, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17564524, Length=314, Percent_Identity=26.1146496815287, Blast_Score=90, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 87080; Mature: 87080
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQYVLWYQELGMGDVNKVGGKNASLGEMISNLSNAGVQVPGGFATTSFAFNEFLEQSGL CCCCEEEHHHCCCCCCHHCCCCCCCHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHCCC NQKIYEILETLDVDDVNALATAGAQIRQWVIDTPFHPEFEQAVRESYDKLSSETNDASFA CHHHHHHHHHCCCCCHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEE VRSSATAEDMPDASFAGQQETFLNVKGYEAVLEATKHVFASLFNDRAISYRVHQGYDHKG EECCCCCCCCCCCCCCCCCHHEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC VALSAGVQRMVRSDKAASGVMFTMDTESGNNDVVFITSSFGLGEMVVQGAVNPDEFYVHK EEHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHCCCCCCCEEEEC PTLVAGHKAVVRRNIGSKLIQMVYSDDESHGKQVKIEDIAADKRREFSINDAEVQELAKQ CCEECCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHH AMTIEKHYGRPMDIEWAKDGNDGKLYIVQARPETVRSREDVQLIERYHLKTQGDVVCEGR HHHHHHHCCCCCCEEECCCCCCCEEEEEECCCHHHCCHHHHHHHHHHHCCCCCCEEECCH AIGHKIGKGVAKVLKSIEDMDQIQPGDVLVTDMTDPDWEPIMKRASAIVTNRGGRTCHAA HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHH IIARELGVPAVVGCGDVTERIKNGQEITVSCAEGDTGLIYNGLQDFEVISSRVDSMPELP HHHHHCCCCEEECCCHHHHHHCCCCEEEEEECCCCCCEEECCHHHHHHHHHHHCCCCCCC MKITMNVGNPDRAFDFARLPNEGVGLARLEFIINRMIGIHPKALLEFNDQTAELQQEIHE EEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHEECCCHHHHHHHHHHH MIAGYESPVEFYVARLVEGIATIASAFHPKKVIVRMSDFKSNEYANLVGGDRYEPEEENP HHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCHHCCCCCCCCCCCCCC MLGFRGASRYISESFRDCFALECEAIKRVRNEMGLKNVEIMIPFVRTLSEAAQVIELLKE CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHH QGLERGKDGLRVIMMCELPSNALLAEQFLEHFDGFSIGSNDLTQLTLGLDRDSGIISHLF CCHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHH DERNDAVKALLSMAIKAAKAKGAYVGICGQGPSDHPDFAAWLVEQGIDTVSLNPDTVIDT HCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCEEECCCCHHHHH WLYLAEAHG HHHHHHCCC >Mature Secondary Structure MQQYVLWYQELGMGDVNKVGGKNASLGEMISNLSNAGVQVPGGFATTSFAFNEFLEQSGL CCCCEEEHHHCCCCCCHHCCCCCCCHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHCCC NQKIYEILETLDVDDVNALATAGAQIRQWVIDTPFHPEFEQAVRESYDKLSSETNDASFA CHHHHHHHHHCCCCCHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEE VRSSATAEDMPDASFAGQQETFLNVKGYEAVLEATKHVFASLFNDRAISYRVHQGYDHKG EECCCCCCCCCCCCCCCCCHHEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC VALSAGVQRMVRSDKAASGVMFTMDTESGNNDVVFITSSFGLGEMVVQGAVNPDEFYVHK EEHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHCCCCCCCEEEEC PTLVAGHKAVVRRNIGSKLIQMVYSDDESHGKQVKIEDIAADKRREFSINDAEVQELAKQ CCEECCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHH AMTIEKHYGRPMDIEWAKDGNDGKLYIVQARPETVRSREDVQLIERYHLKTQGDVVCEGR HHHHHHHCCCCCCEEECCCCCCCEEEEEECCCHHHCCHHHHHHHHHHHCCCCCCEEECCH AIGHKIGKGVAKVLKSIEDMDQIQPGDVLVTDMTDPDWEPIMKRASAIVTNRGGRTCHAA HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHH IIARELGVPAVVGCGDVTERIKNGQEITVSCAEGDTGLIYNGLQDFEVISSRVDSMPELP HHHHHCCCCEEECCCHHHHHHCCCCEEEEEECCCCCCEEECCHHHHHHHHHHHCCCCCCC MKITMNVGNPDRAFDFARLPNEGVGLARLEFIINRMIGIHPKALLEFNDQTAELQQEIHE EEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHEECCCHHHHHHHHHHH MIAGYESPVEFYVARLVEGIATIASAFHPKKVIVRMSDFKSNEYANLVGGDRYEPEEENP HHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCHHCCCCCCCCCCCCCC MLGFRGASRYISESFRDCFALECEAIKRVRNEMGLKNVEIMIPFVRTLSEAAQVIELLKE CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHH QGLERGKDGLRVIMMCELPSNALLAEQFLEHFDGFSIGSNDLTQLTLGLDRDSGIISHLF CCHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHH DERNDAVKALLSMAIKAAKAKGAYVGICGQGPSDHPDFAAWLVEQGIDTVSLNPDTVIDT HCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCEEECCCCHHHHH WLYLAEAHG HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1310524; 9097039; 9278503 [H]