Click here to switch to the map view.

The map label for this gene is motY [H]

Identifier: 167623616

GI number: 167623616

Start: 2019952

End: 2020821

Strand: Direct

Name: motY [H]

Synonym: Shal_1685

Alternate gene names: 167623616

Gene position: 2019952-2020821 (Clockwise)

Preceding gene: 167623614

Following gene: 167623617

Centisome position: 38.65

GC content: 42.99

Gene sequence:

>870_bases
ATGCGGCTTTGGCTAATTTTAACATCATTATTGTTGCTACCTTTTTCTGTAAATGCAGATTTGAGGCAATATGTGGCTTC
TTTAGAAGAGTCGCAGTGGCGGCTGAGCGGTAATAATCCGGTGATGTGTCGTCTTGAACATGACATCCCCTCTTATGGCA
AAGCGGTATTTACCAGTTATGCAGGCAAAGATCATAACCTGAATTTTAGCCTCGATATGTGGGTTAAGCCGGATCAGGTA
ACTCAGGCTAAATTAATGAGCATGGCGCCCGCTTGGCGCCCTGGTATATTGTCGAAAGAGATCACTGAACTGACCTATCA
AAAGTACTTTAGCGGTGAAGTTCCGCGTAACGCTGCTTGGTCTATGTTAGCCGAGCTTGAAAGTGGCATGCAGCCGACAT
TTTACTATGCCGATTGGTATAACGAATCGAATAAAATAGCGGTCGGACTTTCAGCGGTGAACTTTAGACGTCAATACTCC
GAATTTAAGTCTTGTTTAGCTTCGTTGTTACCATATTCCTTTGAAGATATTGCCTTTACGGTATTAACTTATGAATCAGG
TGGCACAGAACTTACTCGCTATGCCAAGTCACAGATCGCCAAAGTGCAAGAGTATTTAGCCTATGATAAGAATGTCGACT
TGGTACTGATTGATGCCTACACAGATAGTTATGGTGGTCGCAGTGCTAACCAAAGGGTTTCAGAGCAGCGTGCTGATTCA
GTAAAAGAGTTATTTGTTGCAAGTGGTATTGGTCAAAACCGCATTCACACATTGGGCCATGGTGAAAGAAGACATGTGGC
ATCGAATCAAACGATAGATGAACGTTCTCGTAATCGCCGGGTTGTGATTAGAATTAGTAAACCGTTATAA

Upstream 100 bases:

>100_bases
ACTGATAATCACTGTCATGTGCGTTTGCTTGTTTTATAGGCTAAAGAAAGGTAAATCTTTGCCGATAGAGAGTAGTGATA
CGAATTTAGAGAGTTAATTT

Downstream 100 bases:

>100_bases
CAGGGTCGACGCTTGACAATAGCCTAGCTTAATCGCTGGGCTTTTTTACGGACAAAATTTGATGAGCAAAATAGATTTCG
CCAAATTCAAGATAAAAAAA

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MRLWLILTSLLLLPFSVNADLRQYVASLEESQWRLSGNNPVMCRLEHDIPSYGKAVFTSYAGKDHNLNFSLDMWVKPDQV
TQAKLMSMAPAWRPGILSKEITELTYQKYFSGEVPRNAAWSMLAELESGMQPTFYYADWYNESNKIAVGLSAVNFRRQYS
EFKSCLASLLPYSFEDIAFTVLTYESGGTELTRYAKSQIAKVQEYLAYDKNVDLVLIDAYTDSYGGRSANQRVSEQRADS
VKELFVASGIGQNRIHTLGHGERRHVASNQTIDERSRNRRVVIRISKPL

Sequences:

>Translated_289_residues
MRLWLILTSLLLLPFSVNADLRQYVASLEESQWRLSGNNPVMCRLEHDIPSYGKAVFTSYAGKDHNLNFSLDMWVKPDQV
TQAKLMSMAPAWRPGILSKEITELTYQKYFSGEVPRNAAWSMLAELESGMQPTFYYADWYNESNKIAVGLSAVNFRRQYS
EFKSCLASLLPYSFEDIAFTVLTYESGGTELTRYAKSQIAKVQEYLAYDKNVDLVLIDAYTDSYGGRSANQRVSEQRADS
VKELFVASGIGQNRIHTLGHGERRHVASNQTIDERSRNRRVVIRISKPL
>Mature_289_residues
MRLWLILTSLLLLPFSVNADLRQYVASLEESQWRLSGNNPVMCRLEHDIPSYGKAVFTSYAGKDHNLNFSLDMWVKPDQV
TQAKLMSMAPAWRPGILSKEITELTYQKYFSGEVPRNAAWSMLAELESGMQPTFYYADWYNESNKIAVGLSAVNFRRQYS
EFKSCLASLLPYSFEDIAFTVLTYESGGTELTRYAKSQIAKVQEYLAYDKNVDLVLIDAYTDSYGGRSANQRVSEQRADS
VKELFVASGIGQNRIHTLGHGERRHVASNQTIDERSRNRRVVIRISKPL

Specific function: Plays the role of a stator in the sodium flagellar motor, stabilizing the force-generating unit through direct interaction with the cell wall [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=75, Percent_Identity=45.3333333333333, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 32953; Mature: 32953

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLWLILTSLLLLPFSVNADLRQYVASLEESQWRLSGNNPVMCRLEHDIPSYGKAVFTSY
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCHHHHHHHHC
AGKDHNLNFSLDMWVKPDQVTQAKLMSMAPAWRPGILSKEITELTYQKYFSGEVPRNAAW
CCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHH
SMLAELESGMQPTFYYADWYNESNKIAVGLSAVNFRRQYSEFKSCLASLLPYSFEDIAFT
HHHHHHHCCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
VLTYESGGTELTRYAKSQIAKVQEYLAYDKNVDLVLIDAYTDSYGGRSANQRVSEQRADS
EEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
VKELFVASGIGQNRIHTLGHGERRHVASNQTIDERSRNRRVVIRISKPL
HHHHHHHCCCCCCCEEECCCCCHHHCCCCCCHHHHCCCCEEEEEECCCC
>Mature Secondary Structure
MRLWLILTSLLLLPFSVNADLRQYVASLEESQWRLSGNNPVMCRLEHDIPSYGKAVFTSY
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCHHHHHHHHC
AGKDHNLNFSLDMWVKPDQVTQAKLMSMAPAWRPGILSKEITELTYQKYFSGEVPRNAAW
CCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHH
SMLAELESGMQPTFYYADWYNESNKIAVGLSAVNFRRQYSEFKSCLASLLPYSFEDIAFT
HHHHHHHCCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
VLTYESGGTELTRYAKSQIAKVQEYLAYDKNVDLVLIDAYTDSYGGRSANQRVSEQRADS
EEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
VKELFVASGIGQNRIHTLGHGERRHVASNQTIDERSRNRRVVIRISKPL
HHHHHHHCCCCCCCEEECCCCCHHHCCCCCCHHHHCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8021208; 12620739 [H]