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The map label for this gene is nqrA [H]

Identifier: 167623575

GI number: 167623575

Start: 1973849

End: 1975210

Strand: Direct

Name: nqrA [H]

Synonym: Shal_1644

Alternate gene names: 167623575

Gene position: 1973849-1975210 (Clockwise)

Preceding gene: 167623572

Following gene: 167623576

Centisome position: 37.76

GC content: 48.46

Gene sequence:

>1362_bases
ATGGCAGGTTACTCAAACCAAGTTATAACGATAAAAAAGGGCTTAGATGTGCCCATAGCCGGTGAACCTTCGCAAGTGAT
CCATGATGGTCCTAAGGCATCCCATGTTGCCTTGCTCGGTGAAGAATACATTGGCTTGAAACCAACAATGCTTGTAGAGG
TGGGGGATCATGTTCAAAAGGGCCAAGCGCTCTTTGAAGATAAGAAAACCACCGGCGTTATTTATACCGCGCCCGCAAGT
GGTAAAGTTATTGCGATTAACCGAGGTGAACGCAGACTTTTCCAATCCATCGTTATTGAATGTGATGACACTGAGGCAAA
AAACTTTACAGCATGTAAAGATATTGACTCATTAAGTCGTCAAGCCGTACAAGACAAACTCGTTGAAAGTGGTTTGTGGA
CCGCATTACGTACTCGCCCTTTCTCCAAAGTCCCTCAATTAGACAGCCTTCCTGCTGGTATTTTTGTTAGCGCAATGGAC
AGCAATCCATTATCCGCCGAACCTAGACTGATTATTAGCGAACAAGAGCAAGCGTTTGCGGCAGGATTACAGGTGTTGAG
TCAGCTGACTGATGCAAAGGTACACCTATGCCAAGAGCAAGGTGAGCCACTGCCAGGCCATGACCTACCCAAAGTCAGCA
ATCACTATTTTGCTGGCGTACACCCAGCAGGCATAGTGGGAACCCATATTCATTTCGTCTTGCCTGTCAGTCTTGAGCGT
CCAGTTTGGCACCTTGGCTATCAAGACGTTATCGCCTACGGCAAACTGTTTTTAACCGGTGAGCTTTATTCCGACCGTGT
TGTTGCATTGGCCGGCCCCGACGTTATCAATCCGCGTCTTATTCGTATGCAAGCAGGTGCACAGCTATCTGAAGTCATTC
GAGGCGAATTAAAAGAGGGTTTCTCTCGTGTGGTATCGGGCTCACTGTTGTCGGGTCATACCGCAAAAGGGCCTCATGAT
TTCCTCGGCCGTTTCCATAATCAAATTAGCGTGCTGCAAGAGGATGCTAAACATCATCTATTGCCGTGGGTACGTGGCGG
CTCGACTAAGTTCTCCATTACCCGCGCGGTAACATCACGCCTTAAGGGCGCTAAGCAGCTGTTCGACTTTACCACCCACA
CTGGCGGCTCAGCGCGTGCCATGATGGCTTTTGGTCAGCTAGATCGCGTCATGCCGCTGGATATCTTACCGACCTTGTTG
GTGAGAGATCTAGTGGTACGTGATACTGATGAGGCGCAGGCGCTTGGGGCATTAGAGCTGGATGAAGAAGATTTAGCACT
GTGCACATTTGTGTGCCCTGGCAAGTATGACTTTGGTAAAGAGTTACGTGCTTGTTTAGAGATTATTGAGAGGGAAGGGT
AA

Upstream 100 bases:

>100_bases
AACTTACAACTTTGGCAGCAAAGTGTGAAGTTTGACTTGGAATATTAGTTAACAAACATTTATTATTGTGCATCCAAAAT
TTTAACGGTTGATTTTAGTG

Downstream 100 bases:

>100_bases
TGAGTCAGCAAGATAAAAAGCCTGATATCCAAGAGGATTATTATGCGCCGGGTAACTCGGTAAAGGGCTATTTAAGCTCA
CTGCTGATAGCCCATGGTCG

Product: Na(+)-translocating NADH-quinone reductase subunit A

Products: NA

Alternate protein names: Na(+)-NQR subunit A; Na(+)-translocating NQR subunit A; NQR complex subunit A; NQR-1 subunit A [H]

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MAGYSNQVITIKKGLDVPIAGEPSQVIHDGPKASHVALLGEEYIGLKPTMLVEVGDHVQKGQALFEDKKTTGVIYTAPAS
GKVIAINRGERRLFQSIVIECDDTEAKNFTACKDIDSLSRQAVQDKLVESGLWTALRTRPFSKVPQLDSLPAGIFVSAMD
SNPLSAEPRLIISEQEQAFAAGLQVLSQLTDAKVHLCQEQGEPLPGHDLPKVSNHYFAGVHPAGIVGTHIHFVLPVSLER
PVWHLGYQDVIAYGKLFLTGELYSDRVVALAGPDVINPRLIRMQAGAQLSEVIRGELKEGFSRVVSGSLLSGHTAKGPHD
FLGRFHNQISVLQEDAKHHLLPWVRGGSTKFSITRAVTSRLKGAKQLFDFTTHTGGSARAMMAFGQLDRVMPLDILPTLL
VRDLVVRDTDEAQALGALELDEEDLALCTFVCPGKYDFGKELRACLEIIEREG

Sequences:

>Translated_453_residues
MAGYSNQVITIKKGLDVPIAGEPSQVIHDGPKASHVALLGEEYIGLKPTMLVEVGDHVQKGQALFEDKKTTGVIYTAPAS
GKVIAINRGERRLFQSIVIECDDTEAKNFTACKDIDSLSRQAVQDKLVESGLWTALRTRPFSKVPQLDSLPAGIFVSAMD
SNPLSAEPRLIISEQEQAFAAGLQVLSQLTDAKVHLCQEQGEPLPGHDLPKVSNHYFAGVHPAGIVGTHIHFVLPVSLER
PVWHLGYQDVIAYGKLFLTGELYSDRVVALAGPDVINPRLIRMQAGAQLSEVIRGELKEGFSRVVSGSLLSGHTAKGPHD
FLGRFHNQISVLQEDAKHHLLPWVRGGSTKFSITRAVTSRLKGAKQLFDFTTHTGGSARAMMAFGQLDRVMPLDILPTLL
VRDLVVRDTDEAQALGALELDEEDLALCTFVCPGKYDFGKELRACLEIIEREG
>Mature_452_residues
AGYSNQVITIKKGLDVPIAGEPSQVIHDGPKASHVALLGEEYIGLKPTMLVEVGDHVQKGQALFEDKKTTGVIYTAPASG
KVIAINRGERRLFQSIVIECDDTEAKNFTACKDIDSLSRQAVQDKLVESGLWTALRTRPFSKVPQLDSLPAGIFVSAMDS
NPLSAEPRLIISEQEQAFAAGLQVLSQLTDAKVHLCQEQGEPLPGHDLPKVSNHYFAGVHPAGIVGTHIHFVLPVSLERP
VWHLGYQDVIAYGKLFLTGELYSDRVVALAGPDVINPRLIRMQAGAQLSEVIRGELKEGFSRVVSGSLLSGHTAKGPHDF
LGRFHNQISVLQEDAKHHLLPWVRGGSTKFSITRAVTSRLKGAKQLFDFTTHTGGSARAMMAFGQLDRVMPLDILPTLLV
RDLVVRDTDEAQALGALELDEEDLALCTFVCPGKYDFGKELRACLEIIEREG

Specific function: NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to nqrE are probably involved in the second step, the conversion of ubisemiqui

COG id: COG1726

COG function: function code C; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nqrA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008703
- InterPro:   IPR022615 [H]

Pfam domain/function: PF05896 NQRA; PF11973 NQRA_SLBB [H]

EC number: NA

Molecular weight: Translated: 49404; Mature: 49273

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGYSNQVITIKKGLDVPIAGEPSQVIHDGPKASHVALLGEEYIGLKPTMLVEVGDHVQK
CCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCEEEEECCHHCCCCCEEEEEECCHHHH
GQALFEDKKTTGVIYTAPASGKVIAINRGERRLFQSIVIECDDTEAKNFTACKDIDSLSR
CHHHHHCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHEECCCCCCCCCCHHHHHHHHHH
QAVQDKLVESGLWTALRTRPFSKVPQLDSLPAGIFVSAMDSNPLSAEPRLIISEQEQAFA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCHHHHHH
AGLQVLSQLTDAKVHLCQEQGEPLPGHDLPKVSNHYFAGVHPAGIVGTHIHFVLPVSLER
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEECEEEEEEEECCCC
PVWHLGYQDVIAYGKLFLTGELYSDRVVALAGPDVINPRLIRMQAGAQLSEVIRGELKEG
CCHHCCHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHH
FSRVVSGSLLSGHTAKGPHDFLGRFHNQISVLQEDAKHHLLPWVRGGSTKFSITRAVTSR
HHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEHHHHHHHH
LKGAKQLFDFTTHTGGSARAMMAFGQLDRVMPLDILPTLLVRDLVVRDTDEAQALGALEL
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCEEE
DEEDLALCTFVCPGKYDFGKELRACLEIIEREG
CCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AGYSNQVITIKKGLDVPIAGEPSQVIHDGPKASHVALLGEEYIGLKPTMLVEVGDHVQK
CCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCEEEEECCHHCCCCCEEEEEECCHHHH
GQALFEDKKTTGVIYTAPASGKVIAINRGERRLFQSIVIECDDTEAKNFTACKDIDSLSR
CHHHHHCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHEECCCCCCCCCCHHHHHHHHHH
QAVQDKLVESGLWTALRTRPFSKVPQLDSLPAGIFVSAMDSNPLSAEPRLIISEQEQAFA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCHHHHHH
AGLQVLSQLTDAKVHLCQEQGEPLPGHDLPKVSNHYFAGVHPAGIVGTHIHFVLPVSLER
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEECEEEEEEEECCCC
PVWHLGYQDVIAYGKLFLTGELYSDRVVALAGPDVINPRLIRMQAGAQLSEVIRGELKEG
CCHHCCHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHH
FSRVVSGSLLSGHTAKGPHDFLGRFHNQISVLQEDAKHHLLPWVRGGSTKFSITRAVTSR
HHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEHHHHHHHH
LKGAKQLFDFTTHTGGSARAMMAFGQLDRVMPLDILPTLLVRDLVVRDTDEAQALGALEL
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCEEE
DEEDLALCTFVCPGKYDFGKELRACLEIIEREG
CCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA