Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is 167623568
Identifier: 167623568
GI number: 167623568
Start: 1965996
End: 1966799
Strand: Direct
Name: 167623568
Synonym: Shal_1637
Alternate gene names: NA
Gene position: 1965996-1966799 (Clockwise)
Preceding gene: 167623567
Following gene: 167623572
Centisome position: 37.61
GC content: 42.66
Gene sequence:
>804_bases ATGCTTTGGACAATAGCGGAGAAGCTAACAGAGAGCGGTGTGCAAACCGGTGTATTACTGCCGTTAACAGATGCTGATAC ATTAATTGAACTAGATGGATTTAGCTATTTAGGCAACATAGTTACAGAGAATATGGCGAAAAAGCATCAGCCACTGGTGT CGAGACATGATCCTTTTATTGCTCCCTATGATCCTTCACTTTACATTGGAGAGGTCGGTTCAGAACATGTCTGTTTACTG AATAAATTTCCGATTATCACTCCGCATATATTGATCTGTGCTAAAGAATATCTTTCGCAAACATCGGCTTTGAGATTAGT CGATTTTCAGGCATGGGTTAAGGGCTTTTCTTCGGCCGATACGCTGGGTTTTTTTAATGCCGGGCACGATGCCGGGGCTA GCCAAATGCACCGTCATATGCAGTTAGTTAAAACGCCTATCTTATTAGAAGCTTCAATACTCTCAGGCCAATTACCCTTT AAGCATTATCTATTTCAATTTGAACACTTAGATGCCGAATTGTTGATGCAGCATTATAACGCCGCGATGATTAAGTTTAG CCGCTACAAAACGACCATGACTGACGGCGTCGCGGAGTGTTTACCTTATAATATTTTACTGACTCAGCGATGGATGTTAA TTGTGCCACGCTCCACCAATGTGGTAGGCCCAGTCTCTGGCCATGGCTTGTGTTATAGCGGTCGATTTTTGGTTAGCTCA GAGGAGCAGCTTTGTTGGTTAACTGAGTATGGCTTTTTACAGTTCTTGACTGATTGTGGTTATCCAATAGAGTCATCGTT CTAG
Upstream 100 bases:
>100_bases TTAGGGCGGTTAGGCTTTGATAAAGTAGCGAAAACGGCTGTTTTTATCACAGTGAATAGATTATTCTCAGTCGGCAACCT TTTGAATTGGATCGAGTCAA
Downstream 100 bases:
>100_bases CCATAGCCATAGCCATAGCCATAGCCATAGCCATATTTACTGCAATACTGATATTCATAGCCAAGCAGCTTACTTATTTT AAAGTATAGTTTTAAAGCAC
Product: Ap4A phosphorylase II
Products: NA
Alternate protein names: Ap4A Phosphorylase II; ATP Adenylyltransferase-Like Protein; Ap4a Phosphorylase II; AP-4-A Phosphorylase II
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MLWTIAEKLTESGVQTGVLLPLTDADTLIELDGFSYLGNIVTENMAKKHQPLVSRHDPFIAPYDPSLYIGEVGSEHVCLL NKFPIITPHILICAKEYLSQTSALRLVDFQAWVKGFSSADTLGFFNAGHDAGASQMHRHMQLVKTPILLEASILSGQLPF KHYLFQFEHLDAELLMQHYNAAMIKFSRYKTTMTDGVAECLPYNILLTQRWMLIVPRSTNVVGPVSGHGLCYSGRFLVSS EEQLCWLTEYGFLQFLTDCGYPIESSF
Sequences:
>Translated_267_residues MLWTIAEKLTESGVQTGVLLPLTDADTLIELDGFSYLGNIVTENMAKKHQPLVSRHDPFIAPYDPSLYIGEVGSEHVCLL NKFPIITPHILICAKEYLSQTSALRLVDFQAWVKGFSSADTLGFFNAGHDAGASQMHRHMQLVKTPILLEASILSGQLPF KHYLFQFEHLDAELLMQHYNAAMIKFSRYKTTMTDGVAECLPYNILLTQRWMLIVPRSTNVVGPVSGHGLCYSGRFLVSS EEQLCWLTEYGFLQFLTDCGYPIESSF >Mature_267_residues MLWTIAEKLTESGVQTGVLLPLTDADTLIELDGFSYLGNIVTENMAKKHQPLVSRHDPFIAPYDPSLYIGEVGSEHVCLL NKFPIITPHILICAKEYLSQTSALRLVDFQAWVKGFSSADTLGFFNAGHDAGASQMHRHMQLVKTPILLEASILSGQLPF KHYLFQFEHLDAELLMQHYNAAMIKFSRYKTTMTDGVAECLPYNILLTQRWMLIVPRSTNVVGPVSGHGLCYSGRFLVSS EEQLCWLTEYGFLQFLTDCGYPIESSF
Specific function: Unknown
COG id: COG4360
COG function: function code F; ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6320739, Length=251, Percent_Identity=29.8804780876494, Blast_Score=83, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6319799, Length=246, Percent_Identity=25.609756097561, Blast_Score=72, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30002; Mature: 30002
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWTIAEKLTESGVQTGVLLPLTDADTLIELDGFSYLGNIVTENMAKKHQPLVSRHDPFI CCCHHHHHHHHCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHCCCCEE APYDPSLYIGEVGSEHVCLLNKFPIITPHILICAKEYLSQTSALRLVDFQAWVKGFSSAD CCCCCCEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHEEEHHHHHCCCCCCC TLGFFNAGHDAGASQMHRHMQLVKTPILLEASILSGQLPFKHYLFQFEHLDAELLMQHYN CCEEECCCCCCCHHHHHHHHHHHHCCCEEEEHHHCCCCCHHHHHHHHHCCCHHHHHHHCC AAMIKFSRYKTTMTDGVAECLPYNILLTQRWMLIVPRSTNVVGPVSGHGLCYSGRFLVSS HHEEEEEHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCEECCCCCCCEEEECEEEEEC EEQLCWLTEYGFLQFLTDCGYPIESSF CCCEEEEHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLWTIAEKLTESGVQTGVLLPLTDADTLIELDGFSYLGNIVTENMAKKHQPLVSRHDPFI CCCHHHHHHHHCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHCCCCEE APYDPSLYIGEVGSEHVCLLNKFPIITPHILICAKEYLSQTSALRLVDFQAWVKGFSSAD CCCCCCEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHEEEHHHHHCCCCCCC TLGFFNAGHDAGASQMHRHMQLVKTPILLEASILSGQLPFKHYLFQFEHLDAELLMQHYN CCEEECCCCCCCHHHHHHHHHHHHCCCEEEEHHHCCCCCHHHHHHHHHCCCHHHHHHHCC AAMIKFSRYKTTMTDGVAECLPYNILLTQRWMLIVPRSTNVVGPVSGHGLCYSGRFLVSS HHEEEEEHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCEECCCCCCCEEEECEEEEEC EEQLCWLTEYGFLQFLTDCGYPIESSF CCCEEEEHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA