Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is nifP [H]
Identifier: 167623501
GI number: 167623501
Start: 1889225
End: 1890046
Strand: Direct
Name: nifP [H]
Synonym: Shal_1570
Alternate gene names: 167623501
Gene position: 1889225-1890046 (Clockwise)
Preceding gene: 167623500
Following gene: 167623502
Centisome position: 36.14
GC content: 48.91
Gene sequence:
>822_bases ATGGGTGTTATCGCAAGACTGAAAGACGACATAGCCTCTATTTACCATAGAGATCCAGCAGCAAACGGAACCATTGAAAT CTTATTCAATTATCCGGGAATGCAAGCGATTTGGATCCACAGGGTAAGCCATAAACTCTGGGTTAGAAATTGGCGACTTT CGGCGCGATGTTTATCTACCTTCTCTCGATGGTTAACCGGGGTAGAAATACACCCTGGTGCCACCATAGGTGATCGTTTC TTTATCGACCACGGCATGGGCGTAGTGATCGGGGAAACGGCAGAAATCGGCAACGACTGCACCCTTTATCATGGGGTAAC CTTAGGTGGTACGACTTGGCAGTCGGGTAAACGTCACCCCACATTGGGCAATAATGTGGTGATAGGTGCTGGAGCCAAGA TATTGGGCCCGATCACCATGAACGATGGTGCCCGCGTTGGTTCTAATTCTGTGGTGGTTAAAGATGTGCCTGTCGACACG ACAGTGGTGGGTATTCCTGGCCGCGTTGTGGCTACGCCGTCGGCACAATCAAAAGAAACCTCCCAGCGCCGCACTGAAAT GGCAAAGAAATATGGCTTCGATGCCTACGCGGTATCGCCTGATAATCCAGATCCCGTCGCCAATGCCATTGGGCAGATGC TTGATCATATGCATCTAATGGACTCTAAAGTTCAAGAAGTCTGCCAGGCTGTGCAAACTTTAGGCGGAAGTGTCTGCACT GAAAAACTACCGGAGCTTGATGTTGAAGATTTTAGTGATGCAGAAACTGCGGCAGCGCAGAAACGTCAGAAGTCTTTAGA TGAGTTTGATCCCATTATATAG
Upstream 100 bases:
>100_bases GAGATGAACATCTTGCGTGGTATATTGACCTCGATTGATAAAGTCGTTGACAAGACTGAGACTAAAGATAAGTAAGTAGC GCTAAAAAGGAAGTAGCTAA
Downstream 100 bases:
>100_bases ATTAATGTGCGCCTAAAATCCCAATTAGCATTGAATCTTGCCTAATAAACAGGTTAAATACCCCAGCAAAATGACGGGGT ATTTAATTCCTGTCATGATC
Product: serine O-acetyltransferase
Products: NA
Alternate protein names: SAT [H]
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MGVIARLKDDIASIYHRDPAANGTIEILFNYPGMQAIWIHRVSHKLWVRNWRLSARCLSTFSRWLTGVEIHPGATIGDRF FIDHGMGVVIGETAEIGNDCTLYHGVTLGGTTWQSGKRHPTLGNNVVIGAGAKILGPITMNDGARVGSNSVVVKDVPVDT TVVGIPGRVVATPSAQSKETSQRRTEMAKKYGFDAYAVSPDNPDPVANAIGQMLDHMHLMDSKVQEVCQAVQTLGGSVCT EKLPELDVEDFSDAETAAAQKRQKSLDEFDPII
Sequences:
>Translated_273_residues MGVIARLKDDIASIYHRDPAANGTIEILFNYPGMQAIWIHRVSHKLWVRNWRLSARCLSTFSRWLTGVEIHPGATIGDRF FIDHGMGVVIGETAEIGNDCTLYHGVTLGGTTWQSGKRHPTLGNNVVIGAGAKILGPITMNDGARVGSNSVVVKDVPVDT TVVGIPGRVVATPSAQSKETSQRRTEMAKKYGFDAYAVSPDNPDPVANAIGQMLDHMHLMDSKVQEVCQAVQTLGGSVCT EKLPELDVEDFSDAETAAAQKRQKSLDEFDPII >Mature_272_residues GVIARLKDDIASIYHRDPAANGTIEILFNYPGMQAIWIHRVSHKLWVRNWRLSARCLSTFSRWLTGVEIHPGATIGDRFF IDHGMGVVIGETAEIGNDCTLYHGVTLGGTTWQSGKRHPTLGNNVVIGAGAKILGPITMNDGARVGSNSVVVKDVPVDTT VVGIPGRVVATPSAQSKETSQRRTEMAKKYGFDAYAVSPDNPDPVANAIGQMLDHMHLMDSKVQEVCQAVQTLGGSVCTE KLPELDVEDFSDAETAAAQKRQKSLDEFDPII
Specific function: Probable serine acetyltransferase required for optimizing the expression of nitrogenase activity. May be required to boost rates of synthesis or intracellular concentrations of cysteine or methionine [H]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790035, Length=173, Percent_Identity=41.6184971098266, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1788371, Length=141, Percent_Identity=40.4255319148936, Blast_Score=75, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018357 - InterPro: IPR005881 - InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =2.3.1.30 [H]
Molecular weight: Translated: 29608; Mature: 29477
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVIARLKDDIASIYHRDPAANGTIEILFNYPGMQAIWIHRVSHKLWVRNWRLSARCLST CCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHCCCHHHHHHHH FSRWLTGVEIHPGATIGDRFFIDHGMGVVIGETAEIGNDCTLYHGVTLGGTTWQSGKRHP HHHHHCCCEECCCCCCCCEEEEECCCEEEEECHHHCCCCEEEEECEEECCCCCCCCCCCC TLGNNVVIGAGAKILGPITMNDGARVGSNSVVVKDVPVDTTVVGIPGRVVATPSAQSKET CCCCCEEEECCCEEEEEEEECCCCEECCCCEEEEECCCCEEEEECCCEEEECCCCCCHHH SQRRTEMAKKYGFDAYAVSPDNPDPVANAIGQMLDHMHLMDSKVQEVCQAVQTLGGSVCT HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH EKLPELDVEDFSDAETAAAQKRQKSLDEFDPII HHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GVIARLKDDIASIYHRDPAANGTIEILFNYPGMQAIWIHRVSHKLWVRNWRLSARCLST CCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHCCCHHHHHHHH FSRWLTGVEIHPGATIGDRFFIDHGMGVVIGETAEIGNDCTLYHGVTLGGTTWQSGKRHP HHHHHCCCEECCCCCCCCEEEEECCCEEEEECHHHCCCCEEEEECEEECCCCCCCCCCCC TLGNNVVIGAGAKILGPITMNDGARVGSNSVVVKDVPVDTTVVGIPGRVVATPSAQSKET CCCCCEEEECCCEEEEEEEECCCCEECCCCEEEEECCCCEEEEECCCEEEECCCCCCHHH SQRRTEMAKKYGFDAYAVSPDNPDPVANAIGQMLDHMHLMDSKVQEVCQAVQTLGGSVCT HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH EKLPELDVEDFSDAETAAAQKRQKSLDEFDPII HHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1885524 [H]