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The map label for this gene is yajC [H]

Identifier: 167623486

GI number: 167623486

Start: 1875903

End: 1876235

Strand: Direct

Name: yajC [H]

Synonym: Shal_1555

Alternate gene names: 167623486

Gene position: 1875903-1876235 (Clockwise)

Preceding gene: 167623485

Following gene: 167623487

Centisome position: 35.89

GC content: 42.64

Gene sequence:

>333_bases
ATGTTTATTTCAAACGCATATGCAGCTGATGCACCTGTTGGCGGCGCTGGTGGCACGATGGAATTGATTTTCATGTTGGT
CATTTTTGGCCTAATTTTTTACTTCATGATTTTCCGTCCACAATCTAAGCGCGTTAAAGAGCACAAGAACCTAATGAGCT
CGTTGAGCAAGGGTGACGAAGTGTTAACAAGCGGCGGTATTCTAGGCAAGATCGCTAAGATCAGTGATGAAAATGACTAC
GTGTTGTTGACCATCAACGAGACTAGCGAAATCACGATTAAGAAGGATTATATCGCGGCCGTATTGCCAAAAGGCTCTAT
TAAGTCACTTTAA

Upstream 100 bases:

>100_bases
AGACGCCTTTGTTACGGAATTCTATACCAGCCAAGGTCGAGAAGTACCTGAAGTACCTGAATTAACCGATTAATTTTTAC
TCAGACAAGAAGAGAATACT

Downstream 100 bases:

>100_bases
GCCAAGAGGGCGATGGCGTGTTAAATAAATACCCGATGTGGAAAAACCTAATGGTGATAGTCATTATCGCCATAGGTGGA
TTCTATGCGATACCAAACCT

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MFISNAYAADAPVGGAGGTMELIFMLVIFGLIFYFMIFRPQSKRVKEHKNLMSSLSKGDEVLTSGGILGKIAKISDENDY
VLLTINETSEITIKKDYIAAVLPKGSIKSL

Sequences:

>Translated_110_residues
MFISNAYAADAPVGGAGGTMELIFMLVIFGLIFYFMIFRPQSKRVKEHKNLMSSLSKGDEVLTSGGILGKIAKISDENDY
VLLTINETSEITIKKDYIAAVLPKGSIKSL
>Mature_110_residues
MFISNAYAADAPVGGAGGTMELIFMLVIFGLIFYFMIFRPQSKRVKEHKNLMSSLSKGDEVLTSGGILGKIAKISDENDY
VLLTINETSEITIKKDYIAAVLPKGSIKSL

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=110, Percent_Identity=59.0909090909091, Blast_Score=137, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 11993; Mature: 11993

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFISNAYAADAPVGGAGGTMELIFMLVIFGLIFYFMIFRPQSKRVKEHKNLMSSLSKGDE
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCH
VLTSGGILGKIAKISDENDYVLLTINETSEITIKKDYIAAVLPKGSIKSL
HHHCCCCHHHHEEECCCCCEEEEEECCCCEEEEECCCEEEECCCCCCCCC
>Mature Secondary Structure
MFISNAYAADAPVGGAGGTMELIFMLVIFGLIFYFMIFRPQSKRVKEHKNLMSSLSKGDE
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCH
VLTSGGILGKIAKISDENDYVLLTINETSEITIKKDYIAAVLPKGSIKSL
HHHCCCCHHHHEEECCCCCEEEEEECCCCEEEEECCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]