| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is rhlE [H]
Identifier: 167623474
GI number: 167623474
Start: 1864577
End: 1865905
Strand: Direct
Name: rhlE [H]
Synonym: Shal_1543
Alternate gene names: 167623474
Gene position: 1864577-1865905 (Clockwise)
Preceding gene: 167623473
Following gene: 167623475
Centisome position: 35.67
GC content: 45.75
Gene sequence:
>1329_bases ATGACTCAGTCAGTATCTTCAATCGACAAAGCAGCAACTCCCACTGTGGCTAGCAAACCGACTCACAGTGATTTTACTCA ACTAGGGCTTATGCCTGAGTTGCTCGAAACGCTTAAACTGCTGAGTTATACAACGCCGACAGCTATTCAGTCACACACTA TTCCTGCTGTGCTAAACGGCAAGGATGTGCTTGGTGGCGCAATAACAGGCTCAGGTAAAACAGCCGCTTTTGCGTTGCCA ATCATTCAAAAGATTGCCCAAGCAAAGCCTCGAGCTAAAGAGGGGAACTACGTATCGAGTTTAATCTTGGTGCCGACTCG TGAGTTAGCGCAGCAGGTTGCCGATAGCTTTATGCGCTATTCTCAGCTCATTAAGCCTAACCTAAAAACGCTAGCGGTAT ATGGCGGCGTATCAACGAATACTCAAATGCTAAGCCTACGCGGCGGTGCCGACATTGTTGTTGCGACTCCTGGACGGTTG ATCGATCTCATTTCAAGCAATGCGCTAAAACTGGATAAAACCACTACGTTGGTGCTGGATGAAGCCGATCGCATGTTAAG TCTTGGTTTTACCGAAGAGCTTAATGAGCTTTTAGCAAAGCTGCCAAAGACTAAACAGACATTACTATTTTCTGCAACTT TCCCAGAAGAAGTGCGTGAGCTTACTGATTCTCTACTGAATAACCCAGTAGAAGTACAGTTACAAAGCAGCGAAGAGAGC ACACTGGTTCAGCGTGTAATCACGGTTAACCGTAATCGCAAAACGGCTTTACTTGCGGAGCTTATCAAAGACAATCAATG GCAGCAGGTATTGATCTTTGCCAGTGCTAAGTACAGCTGTAACCGACTTGCGCAAAAGCTAGAGAACGCAGGCATTACCG CCGAAGTGTTCCACAGTGATAAAGGCCAAGGTGCACGTAATCGTGTATTAGAGGGTTTCAAGTCTGGTGAGATCAGTGTG TTGATTGCCACCGATATTGCTGCCCGCGGTATTGATATTGAAAAATTGCCAATTGTGATCAACTTTGAACTGCCAAGAAG TCCTGCTGATTATATGCATCGTATTGGTCGAAGTGGCCGTGCAGGCGAAGCAGGTCTAGCAATGAGTTTGATTTCTCACG ATGAGTATCAACACTTTAAGTTGATTGAAAAGAAAAACAAACTGAGATTAGAGCGTGAGCAGATCCCTGGTTTTGAAGCG GATGCAGAGGCGCCTGAAGACTGCCCATCCCGTGATCTAAAGCCTATGGCTAAACCTGCTGGAACAGGTAAGAAGAATCG AAATAAGTTACCAAAGGCAAATGCCGACGTTTGGACAAAGAAACCTTAA
Upstream 100 bases:
>100_bases TTTAAAATGTCAGCGTAAAATCAGATCAAAAATAAGCTTTTAAGTGGATATTAGCGTAGAATAGGCGCCTTATTTTTGAT TAGGCGTTTACCCGTACATT
Downstream 100 bases:
>100_bases GCAGCATTTAAGTTTTCCTATCGCATATCAAAATGGACTCTTAATGAGTCCTTTTTGATATAAGAATTGCCATTTTTGTG GATTAGCGCTGTTTTTTTAC
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MTQSVSSIDKAATPTVASKPTHSDFTQLGLMPELLETLKLLSYTTPTAIQSHTIPAVLNGKDVLGGAITGSGKTAAFALP IIQKIAQAKPRAKEGNYVSSLILVPTRELAQQVADSFMRYSQLIKPNLKTLAVYGGVSTNTQMLSLRGGADIVVATPGRL IDLISSNALKLDKTTTLVLDEADRMLSLGFTEELNELLAKLPKTKQTLLFSATFPEEVRELTDSLLNNPVEVQLQSSEES TLVQRVITVNRNRKTALLAELIKDNQWQQVLIFASAKYSCNRLAQKLENAGITAEVFHSDKGQGARNRVLEGFKSGEISV LIATDIAARGIDIEKLPIVINFELPRSPADYMHRIGRSGRAGEAGLAMSLISHDEYQHFKLIEKKNKLRLEREQIPGFEA DAEAPEDCPSRDLKPMAKPAGTGKKNRNKLPKANADVWTKKP
Sequences:
>Translated_442_residues MTQSVSSIDKAATPTVASKPTHSDFTQLGLMPELLETLKLLSYTTPTAIQSHTIPAVLNGKDVLGGAITGSGKTAAFALP IIQKIAQAKPRAKEGNYVSSLILVPTRELAQQVADSFMRYSQLIKPNLKTLAVYGGVSTNTQMLSLRGGADIVVATPGRL IDLISSNALKLDKTTTLVLDEADRMLSLGFTEELNELLAKLPKTKQTLLFSATFPEEVRELTDSLLNNPVEVQLQSSEES TLVQRVITVNRNRKTALLAELIKDNQWQQVLIFASAKYSCNRLAQKLENAGITAEVFHSDKGQGARNRVLEGFKSGEISV LIATDIAARGIDIEKLPIVINFELPRSPADYMHRIGRSGRAGEAGLAMSLISHDEYQHFKLIEKKNKLRLEREQIPGFEA DAEAPEDCPSRDLKPMAKPAGTGKKNRNKLPKANADVWTKKP >Mature_441_residues TQSVSSIDKAATPTVASKPTHSDFTQLGLMPELLETLKLLSYTTPTAIQSHTIPAVLNGKDVLGGAITGSGKTAAFALPI IQKIAQAKPRAKEGNYVSSLILVPTRELAQQVADSFMRYSQLIKPNLKTLAVYGGVSTNTQMLSLRGGADIVVATPGRLI DLISSNALKLDKTTTLVLDEADRMLSLGFTEELNELLAKLPKTKQTLLFSATFPEEVRELTDSLLNNPVEVQLQSSEEST LVQRVITVNRNRKTALLAELIKDNQWQQVLIFASAKYSCNRLAQKLENAGITAEVFHSDKGQGARNRVLEGFKSGEISVL IATDIAARGIDIEKLPIVINFELPRSPADYMHRIGRSGRAGEAGLAMSLISHDEYQHFKLIEKKNKLRLEREQIPGFEAD AEAPEDCPSRDLKPMAKPAGTGKKNRNKLPKANADVWTKKP
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI148613856, Length=370, Percent_Identity=37.2972972972973, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI38201710, Length=370, Percent_Identity=37.2972972972973, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI4758138, Length=355, Percent_Identity=36.9014084507042, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI45446747, Length=354, Percent_Identity=37.8531073446328, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI45446743, Length=354, Percent_Identity=37.8531073446328, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI41327771, Length=387, Percent_Identity=35.1421188630491, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI222352149, Length=363, Percent_Identity=36.0881542699724, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI20149629, Length=394, Percent_Identity=35.7868020304569, Blast_Score=238, Evalue=6e-63, Organism=Homo sapiens, GI41327773, Length=366, Percent_Identity=36.6120218579235, Blast_Score=237, Evalue=1e-62, Organism=Homo sapiens, GI224593278, Length=369, Percent_Identity=38.2113821138211, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI164664518, Length=366, Percent_Identity=35.5191256830601, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI31542656, Length=382, Percent_Identity=40.5759162303665, Blast_Score=236, Evalue=2e-62, Organism=Homo sapiens, GI21071032, Length=363, Percent_Identity=35.8126721763085, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI301171475, Length=375, Percent_Identity=36, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI87196351, Length=376, Percent_Identity=36.1702127659575, Blast_Score=227, Evalue=1e-59, Organism=Homo sapiens, GI301171467, Length=376, Percent_Identity=36.1702127659575, Blast_Score=227, Evalue=1e-59, Organism=Homo sapiens, GI169881239, Length=378, Percent_Identity=34.9206349206349, Blast_Score=225, Evalue=6e-59, Organism=Homo sapiens, GI13514809, Length=378, Percent_Identity=34.9206349206349, Blast_Score=225, Evalue=6e-59, Organism=Homo sapiens, GI55749865, Length=368, Percent_Identity=34.5108695652174, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI7661920, Length=385, Percent_Identity=31.6883116883117, Blast_Score=218, Evalue=6e-57, Organism=Homo sapiens, GI262118318, Length=364, Percent_Identity=35.1648351648352, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI262231852, Length=364, Percent_Identity=35.1648351648352, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI216548263, Length=364, Percent_Identity=35.1648351648352, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI13518015, Length=364, Percent_Identity=35.1648351648352, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI188035877, Length=373, Percent_Identity=35.656836461126, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI41327776, Length=392, Percent_Identity=33.4183673469388, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI51094101, Length=361, Percent_Identity=36.5650969529086, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI164419743, Length=361, Percent_Identity=36.5650969529086, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI13129006, Length=409, Percent_Identity=32.2738386308068, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI50659095, Length=386, Percent_Identity=33.419689119171, Blast_Score=206, Evalue=5e-53, Organism=Homo sapiens, GI4758112, Length=355, Percent_Identity=32.9577464788732, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI18375623, Length=355, Percent_Identity=32.9577464788732, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI21040371, Length=355, Percent_Identity=31.830985915493, Blast_Score=195, Evalue=6e-50, Organism=Homo sapiens, GI9506931, Length=396, Percent_Identity=32.8282828282828, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI83700235, Length=366, Percent_Identity=34.6994535519126, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI41327779, Length=380, Percent_Identity=32.1052631578947, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI4503529, Length=364, Percent_Identity=34.0659340659341, Blast_Score=185, Evalue=9e-47, Organism=Homo sapiens, GI38327634, Length=334, Percent_Identity=32.6347305389222, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI17505907, Length=417, Percent_Identity=30.9352517985612, Blast_Score=175, Evalue=6e-44, Organism=Homo sapiens, GI38569503, Length=358, Percent_Identity=32.4022346368715, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI38569505, Length=358, Percent_Identity=32.4022346368715, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI13514831, Length=361, Percent_Identity=33.2409972299169, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI4826686, Length=336, Percent_Identity=32.7380952380952, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI6005743, Length=363, Percent_Identity=32.7823691460055, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI8922886, Length=363, Percent_Identity=32.2314049586777, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI256223453, Length=380, Percent_Identity=31.3157894736842, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI62241022, Length=345, Percent_Identity=32.1739130434783, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI256773275, Length=439, Percent_Identity=28.7015945330296, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI62241024, Length=325, Percent_Identity=33.2307692307692, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI154759257, Length=437, Percent_Identity=26.5446224256293, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI164419732, Length=367, Percent_Identity=28.3378746594005, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI9966805, Length=335, Percent_Identity=34.3283582089552, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI20336298, Length=221, Percent_Identity=35.7466063348416, Blast_Score=131, Evalue=1e-30, Organism=Escherichia coli, GI1787016, Length=379, Percent_Identity=48.8126649076517, Blast_Score=379, Evalue=1e-106, Organism=Escherichia coli, GI87082221, Length=377, Percent_Identity=40.5835543766578, Blast_Score=282, Evalue=3e-77, Organism=Escherichia coli, GI1787605, Length=374, Percent_Identity=37.7005347593583, Blast_Score=249, Evalue=2e-67, Organism=Escherichia coli, GI1788930, Length=377, Percent_Identity=38.9920424403183, Blast_Score=217, Evalue=1e-57, Organism=Escherichia coli, GI1790214, Length=361, Percent_Identity=35.4570637119114, Blast_Score=208, Evalue=4e-55, Organism=Escherichia coli, GI48994977, Length=411, Percent_Identity=22.8710462287105, Blast_Score=66, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17510559, Length=395, Percent_Identity=37.7215189873418, Blast_Score=245, Evalue=4e-65, Organism=Caenorhabditis elegans, GI115533224, Length=349, Percent_Identity=36.9627507163324, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI17552114, Length=371, Percent_Identity=35.8490566037736, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI71987143, Length=370, Percent_Identity=34.8648648648649, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17510307, Length=365, Percent_Identity=38.6301369863014, Blast_Score=238, Evalue=4e-63, Organism=Caenorhabditis elegans, GI86570094, Length=355, Percent_Identity=37.1830985915493, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI71995514, Length=365, Percent_Identity=38.6301369863014, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI17510309, Length=365, Percent_Identity=38.6301369863014, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI32565321, Length=384, Percent_Identity=34.375, Blast_Score=235, Evalue=3e-62, Organism=Caenorhabditis elegans, GI17552642, Length=353, Percent_Identity=37.6770538243626, Blast_Score=222, Evalue=4e-58, Organism=Caenorhabditis elegans, GI17555296, Length=412, Percent_Identity=33.7378640776699, Blast_Score=221, Evalue=6e-58, Organism=Caenorhabditis elegans, GI71995724, Length=384, Percent_Identity=32.5520833333333, Blast_Score=221, Evalue=7e-58, Organism=Caenorhabditis elegans, GI17507121, Length=384, Percent_Identity=32.2916666666667, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17507945, Length=364, Percent_Identity=36.2637362637363, Blast_Score=218, Evalue=4e-57, Organism=Caenorhabditis elegans, GI17537549, Length=439, Percent_Identity=32.3462414578588, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI115532546, Length=377, Percent_Identity=35.5437665782493, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI115532548, Length=377, Percent_Identity=35.5437665782493, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI71995718, Length=367, Percent_Identity=34.8773841961853, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI71999646, Length=358, Percent_Identity=34.9162011173184, Blast_Score=211, Evalue=5e-55, Organism=Caenorhabditis elegans, GI71999644, Length=358, Percent_Identity=34.9162011173184, Blast_Score=211, Evalue=5e-55, Organism=Caenorhabditis elegans, GI17507881, Length=384, Percent_Identity=34.8958333333333, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI71982858, Length=355, Percent_Identity=32.9577464788732, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17507877, Length=383, Percent_Identity=33.420365535248, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI193208216, Length=377, Percent_Identity=34.7480106100796, Blast_Score=197, Evalue=8e-51, Organism=Caenorhabditis elegans, GI17507879, Length=373, Percent_Identity=32.9758713136729, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17509811, Length=355, Percent_Identity=34.3661971830986, Blast_Score=188, Evalue=6e-48, Organism=Caenorhabditis elegans, GI17505370, Length=335, Percent_Identity=36.1194029850746, Blast_Score=181, Evalue=9e-46, Organism=Caenorhabditis elegans, GI17556951, Length=379, Percent_Identity=32.4538258575198, Blast_Score=173, Evalue=1e-43, Organism=Caenorhabditis elegans, GI71990816, Length=400, Percent_Identity=31.5, Blast_Score=170, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17508543, Length=377, Percent_Identity=31.0344827586207, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI193206561, Length=377, Percent_Identity=25.1989389920424, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI25148203, Length=426, Percent_Identity=26.2910798122066, Blast_Score=158, Evalue=4e-39, Organism=Caenorhabditis elegans, GI17536099, Length=404, Percent_Identity=30.1980198019802, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17536101, Length=404, Percent_Identity=30.1980198019802, Blast_Score=154, Evalue=6e-38, Organism=Caenorhabditis elegans, GI17536103, Length=404, Percent_Identity=30.4455445544554, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17553716, Length=367, Percent_Identity=28.3378746594005, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI17507641, Length=419, Percent_Identity=30.3102625298329, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI32564046, Length=400, Percent_Identity=30, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI25148291, Length=393, Percent_Identity=27.2264631043257, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI71997889, Length=376, Percent_Identity=28.4574468085106, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI71982862, Length=208, Percent_Identity=33.6538461538462, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI25148205, Length=345, Percent_Identity=24.9275362318841, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17557982, Length=419, Percent_Identity=24.1050119331742, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71987152, Length=109, Percent_Identity=39.4495412844037, Blast_Score=90, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6324217, Length=355, Percent_Identity=39.4366197183099, Blast_Score=257, Evalue=2e-69, Organism=Saccharomyces cerevisiae, GI6321360, Length=343, Percent_Identity=40.2332361516035, Blast_Score=240, Evalue=4e-64, Organism=Saccharomyces cerevisiae, GI6324778, Length=396, Percent_Identity=35.6060606060606, Blast_Score=236, Evalue=4e-63, Organism=Saccharomyces cerevisiae, GI6325138, Length=397, Percent_Identity=35.7682619647355, Blast_Score=235, Evalue=9e-63, Organism=Saccharomyces cerevisiae, GI6323021, Length=363, Percent_Identity=38.5674931129477, Blast_Score=234, Evalue=3e-62, Organism=Saccharomyces cerevisiae, GI6321856, Length=375, Percent_Identity=36.8, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6320041, Length=381, Percent_Identity=35.6955380577428, Blast_Score=226, Evalue=5e-60, Organism=Saccharomyces cerevisiae, GI6320224, Length=368, Percent_Identity=34.2391304347826, Blast_Score=220, Evalue=4e-58, Organism=Saccharomyces cerevisiae, GI6320119, Length=358, Percent_Identity=34.3575418994413, Blast_Score=211, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6320449, Length=375, Percent_Identity=34.6666666666667, Blast_Score=209, Evalue=5e-55, Organism=Saccharomyces cerevisiae, GI6319714, Length=388, Percent_Identity=31.9587628865979, Blast_Score=206, Evalue=5e-54, Organism=Saccharomyces cerevisiae, GI6321963, Length=383, Percent_Identity=34.7258485639687, Blast_Score=201, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6322912, Length=396, Percent_Identity=33.0808080808081, Blast_Score=192, Evalue=7e-50, Organism=Saccharomyces cerevisiae, GI6322323, Length=396, Percent_Identity=33.0808080808081, Blast_Score=192, Evalue=7e-50, Organism=Saccharomyces cerevisiae, GI6323947, Length=381, Percent_Identity=31.758530183727, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6324620, Length=365, Percent_Identity=32.6027397260274, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6321111, Length=381, Percent_Identity=30.4461942257218, Blast_Score=181, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6319618, Length=414, Percent_Identity=32.3671497584541, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6321267, Length=344, Percent_Identity=32.8488372093023, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6323306, Length=409, Percent_Identity=28.8508557457213, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6322427, Length=370, Percent_Identity=30.8108108108108, Blast_Score=161, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6320173, Length=220, Percent_Identity=39.0909090909091, Blast_Score=151, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6320400, Length=417, Percent_Identity=28.537170263789, Blast_Score=145, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6324366, Length=350, Percent_Identity=28, Blast_Score=118, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6322876, Length=424, Percent_Identity=26.1792452830189, Blast_Score=114, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6323844, Length=384, Percent_Identity=24.21875, Blast_Score=76, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6321374, Length=173, Percent_Identity=29.4797687861272, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI28574962, Length=371, Percent_Identity=35.3099730458221, Blast_Score=251, Evalue=9e-67, Organism=Drosophila melanogaster, GI18857967, Length=361, Percent_Identity=36.8421052631579, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI24644479, Length=367, Percent_Identity=34.8773841961853, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI281361218, Length=357, Percent_Identity=35.5742296918768, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24644481, Length=357, Percent_Identity=35.5742296918768, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24644483, Length=357, Percent_Identity=35.5742296918768, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24644487, Length=357, Percent_Identity=35.5742296918768, Blast_Score=242, Evalue=3e-64, Organism=Drosophila melanogaster, GI45551833, Length=357, Percent_Identity=35.5742296918768, Blast_Score=242, Evalue=3e-64, Organism=Drosophila melanogaster, GI24644485, Length=357, Percent_Identity=35.5742296918768, Blast_Score=242, Evalue=3e-64, Organism=Drosophila melanogaster, GI24642151, Length=360, Percent_Identity=35, Blast_Score=241, Evalue=8e-64, Organism=Drosophila melanogaster, GI24584994, Length=388, Percent_Identity=35.5670103092784, Blast_Score=238, Evalue=4e-63, Organism=Drosophila melanogaster, GI24662330, Length=358, Percent_Identity=37.4301675977654, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI21355075, Length=359, Percent_Identity=36.2116991643454, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI24583279, Length=414, Percent_Identity=33.8164251207729, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24583281, Length=366, Percent_Identity=35.2459016393443, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI21356161, Length=388, Percent_Identity=37.6288659793814, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI28575014, Length=359, Percent_Identity=36.7688022284123, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI24584399, Length=351, Percent_Identity=36.7521367521368, Blast_Score=226, Evalue=4e-59, Organism=Drosophila melanogaster, GI17985987, Length=405, Percent_Identity=34.0740740740741, Blast_Score=225, Evalue=4e-59, Organism=Drosophila melanogaster, GI24585582, Length=383, Percent_Identity=34.7258485639687, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI17977678, Length=400, Percent_Identity=34.25, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI24645031, Length=385, Percent_Identity=32.2077922077922, Blast_Score=218, Evalue=9e-57, Organism=Drosophila melanogaster, GI17136814, Length=355, Percent_Identity=38.0281690140845, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI281365720, Length=329, Percent_Identity=34.3465045592705, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI24582080, Length=385, Percent_Identity=34.025974025974, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24582078, Length=385, Percent_Identity=34.025974025974, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI17136248, Length=385, Percent_Identity=34.025974025974, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24582075, Length=385, Percent_Identity=34.025974025974, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24581954, Length=355, Percent_Identity=32.6760563380282, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24581952, Length=355, Percent_Identity=32.6760563380282, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24581956, Length=355, Percent_Identity=32.6760563380282, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24643725, Length=395, Percent_Identity=33.9240506329114, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI28571808, Length=349, Percent_Identity=32.0916905444126, Blast_Score=181, Evalue=9e-46, Organism=Drosophila melanogaster, GI28571809, Length=349, Percent_Identity=32.0916905444126, Blast_Score=181, Evalue=9e-46, Organism=Drosophila melanogaster, GI17647335, Length=375, Percent_Identity=30.1333333333333, Blast_Score=172, Evalue=3e-43, Organism=Drosophila melanogaster, GI24666101, Length=364, Percent_Identity=31.5934065934066, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI21355559, Length=381, Percent_Identity=31.758530183727, Blast_Score=161, Evalue=8e-40, Organism=Drosophila melanogaster, GI24642822, Length=391, Percent_Identity=30.4347826086957, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI20130173, Length=466, Percent_Identity=28.5407725321888, Blast_Score=155, Evalue=6e-38, Organism=Drosophila melanogaster, GI19920478, Length=365, Percent_Identity=30.4109589041096, Blast_Score=151, Evalue=8e-37, Organism=Drosophila melanogaster, GI24668515, Length=340, Percent_Identity=30.5882352941176, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI28571338, Length=238, Percent_Identity=36.5546218487395, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI18859659, Length=238, Percent_Identity=36.5546218487395, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI17136666, Length=400, Percent_Identity=27, Blast_Score=129, Evalue=5e-30, Organism=Drosophila melanogaster, GI24640164, Length=352, Percent_Identity=25.8522727272727, Blast_Score=108, Evalue=7e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 48289; Mature: 48158
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSVSSIDKAATPTVASKPTHSDFTQLGLMPELLETLKLLSYTTPTAIQSHTIPAVLNG CCCCHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHCCCCCEEECC KDVLGGAITGSGKTAAFALPIIQKIAQAKPRAKEGNYVSSLILVPTRELAQQVADSFMRY CHHCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHH SQLIKPNLKTLAVYGGVSTNTQMLSLRGGADIVVATPGRLIDLISSNALKLDKTTTLVLD HHHHCCCCEEEEEECCCCCCCEEEEECCCCEEEEECCCHHHHHHCCCCEEECCCEEEEEE EADRMLSLGFTEELNELLAKLPKTKQTLLFSATFPEEVRELTDSLLNNPVEVQLQSSEES CCHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCHH TLVQRVITVNRNRKTALLAELIKDNQWQQVLIFASAKYSCNRLAQKLENAGITAEVFHSD HHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECC KGQGARNRVLEGFKSGEISVLIATDIAARGIDIEKLPIVINFELPRSPADYMHRIGRSGR CCCCHHHHHHHCCCCCCEEEEEEECHHHCCCCEECCCEEEEEECCCCHHHHHHHHCCCCC AGEAGLAMSLISHDEYQHFKLIEKKNKLRLEREQIPGFEADAEAPEDCPSRDLKPMAKPA CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC GTGKKNRNKLPKANADVWTKKP CCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQSVSSIDKAATPTVASKPTHSDFTQLGLMPELLETLKLLSYTTPTAIQSHTIPAVLNG CCCHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHCCCCCEEECC KDVLGGAITGSGKTAAFALPIIQKIAQAKPRAKEGNYVSSLILVPTRELAQQVADSFMRY CHHCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHH SQLIKPNLKTLAVYGGVSTNTQMLSLRGGADIVVATPGRLIDLISSNALKLDKTTTLVLD HHHHCCCCEEEEEECCCCCCCEEEEECCCCEEEEECCCHHHHHHCCCCEEECCCEEEEEE EADRMLSLGFTEELNELLAKLPKTKQTLLFSATFPEEVRELTDSLLNNPVEVQLQSSEES CCHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCHH TLVQRVITVNRNRKTALLAELIKDNQWQQVLIFASAKYSCNRLAQKLENAGITAEVFHSD HHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECC KGQGARNRVLEGFKSGEISVLIATDIAARGIDIEKLPIVINFELPRSPADYMHRIGRSGR CCCCHHHHHHHCCCCCCEEEEEEECHHHCCCCEECCCEEEEEECCCCHHHHHHHHCCCCC AGEAGLAMSLISHDEYQHFKLIEKKNKLRLEREQIPGFEADAEAPEDCPSRDLKPMAKPA CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC GTGKKNRNKLPKANADVWTKKP CCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]