Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is ogt [H]
Identifier: 167623473
GI number: 167623473
Start: 1863827
End: 1864390
Strand: Direct
Name: ogt [H]
Synonym: Shal_1542
Alternate gene names: 167623473
Gene position: 1863827-1864390 (Clockwise)
Preceding gene: 167623472
Following gene: 167623474
Centisome position: 35.66
GC content: 45.92
Gene sequence:
>564_bases ATGAATAAACCGTTACTGCCATTAGCTAAATTGAATTTTAAATCCGAGTTCGGCGCGCTCTCTGTGTGCGCTAATGCAGA GGGCATCACTCACGTTAACTTTATTCCACAGCAAGGGGATGAATGGTTATCAAGAGAAGTTGATACTAACCAAGCATTAA TGGGCGCTGGCGCATGTGCAGAGAATGGCGGTTGCGATAGTTATCATCTCGCCAAACAACACCTTTTACAGGCTCAGCTT GAGCTGACGGAGTACTTTGATGGAGCGCGTCGCCAATTTGAGGTAAAACTCGCCCCTAAAGGCACTGAGTTTCAATGTCA GGTTTGGCATGCATTAAGTGAGCTTGAATATGGCGAAAGCTGCAGCTACGCAGATATTGCTAGTCGTATTAATCGTCCTA AAGCGGTGAGAGCGGTGGGCACCGCAAATGGCGCCAATCCCATTGCGATTATTGTGCCTTGCCATAGAGTGATAGGTAAA AATGGTACACTTACTGGCTATGCTTATGGCATCGACTTGAAGCAGAAATTACTTAAACTCGAAGGCTTAAACTCGAAGGG ATAG
Upstream 100 bases:
>100_bases AGTTAGCAACATCAAATGGCTATGATGAGCTAACTCAAGAGCTTGCCAAACACGTTGCTCCATGGGGCAGTTATCTCACA TTTCAGCTTTGGAACCTTTC
Downstream 100 bases:
>100_bases TCTAATTAGGAATTGAGAGAAGTTGAGATAAGTTGAGGGTGACTCGAGTGAGGGCTGGGGTTTGAAATCATCTGGTCAAT ACCCGCTTTAAAATGTCAGC
Product: methylated-DNA--protein-cysteine methyltransferase
Products: NA
Alternate protein names: 6-O-methylguanine-DNA methyltransferase; MGMT; O-6-methylguanine-DNA-alkyltransferase [H]
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MNKPLLPLAKLNFKSEFGALSVCANAEGITHVNFIPQQGDEWLSREVDTNQALMGAGACAENGGCDSYHLAKQHLLQAQL ELTEYFDGARRQFEVKLAPKGTEFQCQVWHALSELEYGESCSYADIASRINRPKAVRAVGTANGANPIAIIVPCHRVIGK NGTLTGYAYGIDLKQKLLKLEGLNSKG
Sequences:
>Translated_187_residues MNKPLLPLAKLNFKSEFGALSVCANAEGITHVNFIPQQGDEWLSREVDTNQALMGAGACAENGGCDSYHLAKQHLLQAQL ELTEYFDGARRQFEVKLAPKGTEFQCQVWHALSELEYGESCSYADIASRINRPKAVRAVGTANGANPIAIIVPCHRVIGK NGTLTGYAYGIDLKQKLLKLEGLNSKG >Mature_187_residues MNKPLLPLAKLNFKSEFGALSVCANAEGITHVNFIPQQGDEWLSREVDTNQALMGAGACAENGGCDSYHLAKQHLLQAQL ELTEYFDGARRQFEVKLAPKGTEFQCQVWHALSELEYGESCSYADIASRINRPKAVRAVGTANGANPIAIIVPCHRVIGK NGTLTGYAYGIDLKQKLLKLEGLNSKG
Specific function: Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) in DNA. Repairs alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. This is a sui
COG id: COG0350
COG function: function code L; Methylated DNA-protein cysteine methyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MGMT family [H]
Homologues:
Organism=Homo sapiens, GI197304670, Length=75, Percent_Identity=41.3333333333333, Blast_Score=68, Evalue=5e-12, Organism=Escherichia coli, GI1787596, Length=103, Percent_Identity=49.5145631067961, Blast_Score=102, Evalue=1e-23, Organism=Escherichia coli, GI1788542, Length=87, Percent_Identity=50.5747126436782, Blast_Score=97, Evalue=9e-22, Organism=Caenorhabditis elegans, GI115533070, Length=81, Percent_Identity=51.8518518518518, Blast_Score=86, Evalue=8e-18, Organism=Caenorhabditis elegans, GI115533068, Length=81, Percent_Identity=51.8518518518518, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6320001, Length=85, Percent_Identity=49.4117647058824, Blast_Score=94, Evalue=2e-20, Organism=Drosophila melanogaster, GI17137554, Length=84, Percent_Identity=47.6190476190476, Blast_Score=76, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001497 - InterPro: IPR014048 - InterPro: IPR008332 - InterPro: IPR011991 [H]
Pfam domain/function: PF01035 DNA_binding_1; PF02870 Methyltransf_1N [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 20334; Mature: 20334
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: PS00374 MGMT ; PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKPLLPLAKLNFKSEFGALSVCANAEGITHVNFIPQQGDEWLSREVDTNQALMGAGACA CCCCCCCHHHCCCCCCCCEEEEECCCCCCEEEEEECCCCHHHHHHCCCCCHHHHCCCCCC ENGGCDSYHLAKQHLLQAQLELTEYFDGARRQFEVKLAPKGTEFQCQVWHALSELEYGES CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEHHHHHHHHHCCCCCC CSYADIASRINRPKAVRAVGTANGANPIAIIVPCHRVIGKNGTLTGYAYGIDLKQKLLKL CCHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECHHHHCCCCCEEEEEECCCHHHHHHHH EGLNSKG CCCCCCC >Mature Secondary Structure MNKPLLPLAKLNFKSEFGALSVCANAEGITHVNFIPQQGDEWLSREVDTNQALMGAGACA CCCCCCCHHHCCCCCCCCEEEEECCCCCCEEEEEECCCCHHHHHHCCCCCHHHHCCCCCC ENGGCDSYHLAKQHLLQAQLELTEYFDGARRQFEVKLAPKGTEFQCQVWHALSELEYGES CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEHHHHHHHHHCCCCCC CSYADIASRINRPKAVRAVGTANGANPIAIIVPCHRVIGKNGTLTGYAYGIDLKQKLLKL CCHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECHHHHCCCCCEEEEEECCCHHHHHHHH EGLNSKG CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]