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The map label for this gene is ynfM [H]

Identifier: 167623468

GI number: 167623468

Start: 1853012

End: 1854241

Strand: Direct

Name: ynfM [H]

Synonym: Shal_1537

Alternate gene names: 167623468

Gene position: 1853012-1854241 (Clockwise)

Preceding gene: 167623466

Following gene: 167623470

Centisome position: 35.45

GC content: 44.39

Gene sequence:

>1230_bases
ATGAATCCCCTTACTCACCAGAGGCAAGATACTAACGAGATCCGCTTAATCATTAGCTTATCTCTCGCTTCTATGGTTAT
TTTTATCAACCTATATTTAGTCCAAGGCATGTTGCCATTGATTGCGGACTCCTTTTCTGTATCAAAAAGCCATGCAACGC
TACTGTTGTCGGTAACCAGTTTCACCATGGCATTCTCACTTCTGTTATTTGCTGTGCTTTCCGATCGTGTCGGCCGTAAA
AAACCTATCTTAGTCAGTTTGTACCTTCTGGTTGCGCTAGATTTTTGTGCACTGTTCATTACTGAGTTTAATCAACTGAT
ATTACTTAGAATGGTGCAGGGGGCATTGCTTGCCTCTGTTCCCGCTATGGCTATGGCTTATTTTAAAGACGAGTTAGGCA
ATAATGCTCTGTTAAAAGCCGGGGCGATCTACATTGCGGCCAATAGTATTGGTGGTATAGCGGGGCGTCTGTTAGGCGGA
GGCATGGCGCAGTATCTAGACTGGCAGCAAGCTATGGCTTTATTAACAGCGGTTTCTTTGATTGGTACGCTTATTGTGAG
CTATCTGTTGCCAAAGAGCCATTTTGTTAAGCCTGAGATTGAATTGAGTAAGTGGCCGCTAAAACGTTCCGACTTTAATG
GTTTTTGTCATCATTTAGCCGATCCTAAGTTACGGCTTATATACCTTGTTGGTGGGCTGGCTTTCATGGTGATGGTAAAC
CAGTTTAGCTATATTCAGCTTCATTTGATGGACAGCCCGTTTTACCTAGGGCGTTTTGAAGTGACACTTATTTTTGTTTG
CTACCTGAGTGGGACCTATGCTTCTTATCGTTCGGCTAAGTGGGTTGGCCAGCTAGGACTAAAGCGAGTTTTTATCTATT
CTGTGCTGGCGTTACTTTCAGGGAGCCTGCTCACTCTATTCGATAGCTTAGGAGCGATCTTTGCAGGCTTTTTGATCTCA
GCCTTTGGTTTCTTCTTAATTCATAGTAGCTGTAACGCCTGGGTTGCCTATCGAGCAAAGCAGCACAGAGCAAAAGCGAC
GGCATTGTATCTTTGTAGCTATTACTTAGGCGCAGCAATCGGCGGTCCCTATTTATTGCCGTTTTGGCTGGTATGGGGCT
GGCAAGGGGTAGTATTAGGTTCGGTACTTGGATTATCAGTACTTGCCTTAGTGGTATTTAAGCTTATCCAGCCAAAGTCT
TCGTCAGGTCCGTTAGTGATGGAGTCATAG

Upstream 100 bases:

>100_bases
TATAACAAAAATCAATAACTATTGGGTTTTTTAGTTGTTATTCTTATGTGGGTGCCCTTGATATGCTATCGAGTAATGAA
ACACTTTGAGTTAGTTACCC

Downstream 100 bases:

>100_bases
CAAATCTGTAAAGAGGGGCAGGGCGCGAGCTCTATTGTTTTTCAGTAAATGTGAATTGCAGTTTGCAATTAAGGCTTTAA
CAGCTTCGAACTGCAGACCC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MNPLTHQRQDTNEIRLIISLSLASMVIFINLYLVQGMLPLIADSFSVSKSHATLLLSVTSFTMAFSLLLFAVLSDRVGRK
KPILVSLYLLVALDFCALFITEFNQLILLRMVQGALLASVPAMAMAYFKDELGNNALLKAGAIYIAANSIGGIAGRLLGG
GMAQYLDWQQAMALLTAVSLIGTLIVSYLLPKSHFVKPEIELSKWPLKRSDFNGFCHHLADPKLRLIYLVGGLAFMVMVN
QFSYIQLHLMDSPFYLGRFEVTLIFVCYLSGTYASYRSAKWVGQLGLKRVFIYSVLALLSGSLLTLFDSLGAIFAGFLIS
AFGFFLIHSSCNAWVAYRAKQHRAKATALYLCSYYLGAAIGGPYLLPFWLVWGWQGVVLGSVLGLSVLALVVFKLIQPKS
SSGPLVMES

Sequences:

>Translated_409_residues
MNPLTHQRQDTNEIRLIISLSLASMVIFINLYLVQGMLPLIADSFSVSKSHATLLLSVTSFTMAFSLLLFAVLSDRVGRK
KPILVSLYLLVALDFCALFITEFNQLILLRMVQGALLASVPAMAMAYFKDELGNNALLKAGAIYIAANSIGGIAGRLLGG
GMAQYLDWQQAMALLTAVSLIGTLIVSYLLPKSHFVKPEIELSKWPLKRSDFNGFCHHLADPKLRLIYLVGGLAFMVMVN
QFSYIQLHLMDSPFYLGRFEVTLIFVCYLSGTYASYRSAKWVGQLGLKRVFIYSVLALLSGSLLTLFDSLGAIFAGFLIS
AFGFFLIHSSCNAWVAYRAKQHRAKATALYLCSYYLGAAIGGPYLLPFWLVWGWQGVVLGSVLGLSVLALVVFKLIQPKS
SSGPLVMES
>Mature_409_residues
MNPLTHQRQDTNEIRLIISLSLASMVIFINLYLVQGMLPLIADSFSVSKSHATLLLSVTSFTMAFSLLLFAVLSDRVGRK
KPILVSLYLLVALDFCALFITEFNQLILLRMVQGALLASVPAMAMAYFKDELGNNALLKAGAIYIAANSIGGIAGRLLGG
GMAQYLDWQQAMALLTAVSLIGTLIVSYLLPKSHFVKPEIELSKWPLKRSDFNGFCHHLADPKLRLIYLVGGLAFMVMVN
QFSYIQLHLMDSPFYLGRFEVTLIFVCYLSGTYASYRSAKWVGQLGLKRVFIYSVLALLSGSLLTLFDSLGAIFAGFLIS
AFGFFLIHSSCNAWVAYRAKQHRAKATALYLCSYYLGAAIGGPYLLPFWLVWGWQGVVLGSVLGLSVLALVVFKLIQPKS
SSGPLVMES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=374, Percent_Identity=33.1550802139037, Blast_Score=196, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44977; Mature: 44977

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPLTHQRQDTNEIRLIISLSLASMVIFINLYLVQGMLPLIADSFSVSKSHATLLLSVTS
CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHH
FTMAFSLLLFAVLSDRVGRKKPILVSLYLLVALDFCALFITEFNQLILLRMVQGALLASV
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAMAMAYFKDELGNNALLKAGAIYIAANSIGGIAGRLLGGGMAQYLDWQQAMALLTAVSL
HHHHHHHHHHHHCCCCEEECCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IGTLIVSYLLPKSHFVKPEIELSKWPLKRSDFNGFCHHLADPKLRLIYLVGGLAFMVMVN
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHH
QFSYIQLHLMDSPFYLGRFEVTLIFVCYLSGTYASYRSAKWVGQLGLKRVFIYSVLALLS
CCCEEEEEEECCCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSLLTLFDSLGAIFAGFLISAFGFFLIHSSCNAWVAYRAKQHRAKATALYLCSYYLGAAI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGPYLLPFWLVWGWQGVVLGSVLGLSVLALVVFKLIQPKSSSGPLVMES
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC
>Mature Secondary Structure
MNPLTHQRQDTNEIRLIISLSLASMVIFINLYLVQGMLPLIADSFSVSKSHATLLLSVTS
CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHH
FTMAFSLLLFAVLSDRVGRKKPILVSLYLLVALDFCALFITEFNQLILLRMVQGALLASV
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAMAMAYFKDELGNNALLKAGAIYIAANSIGGIAGRLLGGGMAQYLDWQQAMALLTAVSL
HHHHHHHHHHHHCCCCEEECCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IGTLIVSYLLPKSHFVKPEIELSKWPLKRSDFNGFCHHLADPKLRLIYLVGGLAFMVMVN
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHH
QFSYIQLHLMDSPFYLGRFEVTLIFVCYLSGTYASYRSAKWVGQLGLKRVFIYSVLALLS
CCCEEEEEEECCCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSLLTLFDSLGAIFAGFLISAFGFFLIHSSCNAWVAYRAKQHRAKATALYLCSYYLGAAI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGPYLLPFWLVWGWQGVVLGSVLGLSVLALVVFKLIQPKSSSGPLVMES
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]