Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is 167623465
Identifier: 167623465
GI number: 167623465
Start: 1850016
End: 1851002
Strand: Direct
Name: 167623465
Synonym: Shal_1534
Alternate gene names: NA
Gene position: 1850016-1851002 (Clockwise)
Preceding gene: 167623464
Following gene: 167623466
Centisome position: 35.39
GC content: 47.32
Gene sequence:
>987_bases ATGAAGTTAGCAAGTTATAACAATGGTCGCCGTGACGGTCAATTGATGTTAGTTAGCAAAGATTTGACTAAAGCCGTTGC TGTGCCTGCTATTGCCCATACGATGCAGCAGTTAATGGATGCTTGGGAGCTACTTAACCCGCAATTGGTAGAACTCTATG ATGCGTTAAACAGTGGCATGATGGATAACGCCGTCGATTTTGACGAATCAAAGTGTTTATCTCCGCTTCCAAGAGCCTAT CAGTGGGCCGATGGCAGCGCTTACGTTAACCATGTTGAGTTAGTACGTAAAGCGCGCGGTGCCCAGATGCCGGAAACATT TTGGACAGATCCTTTAGTCTATCAAGGTGGCTCAGACTGCTTTATCGCACCCAAGGCGGATATTCCGTTAGCAAGTGAAG AGTGGGGCATCGATTTTGAATCCGAAATTGCTGTGATCACTGATGATGTGCCGATGGGCGTCACAGTCGATAATGCCGCG CAGCATATTAAGTTGCTGATGCTAGTAAACGATGTATCGTTAAGAAACCTCATTCCAGGTGAGCTGGCAAAGGGATTTGG CTTCTTCCAGTCAAAGCCATCGAGTAGCTTTTCACCTGTTGCAGTGACACCCGATGAACTAGAAGGTAAGTGGCAGGACT CTAAGATCCACCTGCCGTTAATTACTCATCTTAATAGTGAACTATTTGGTCGTCCAAATGCCGGTGTTGATATGACGTTT AACTTTAGCCAACTCGTATCGCATGTGGCTAAAACACGTCCGCTGGGAGCGGGAGCGATTATCGGTTCGGGCACTATCTC AAATTATGACCGCAGTGCGGGGTCCAGTTGCTTAGCCGAGACTCGTATGTTGGAGACCATCGCAGAAGGGAAGCCGTCGA CTCCTTTTATGGGGTTTGGTGATCGGGTACGTATCGAGATGCTCGATGACGACAATAACAGCATTTTTGGTTCGATCGAT CAGCAAGTGGTCGAATATAAAGTCTGA
Upstream 100 bases:
>100_bases GTATTTCTATGGCAAAGCTCTATTTAGGCCAATAGAGTGTTGTCATCACAATAGAAAACCAACAAGGTGATAGTCATACC ACAAACAACTAGGAGTAAGA
Downstream 100 bases:
>100_bases TAAGGTGTTGTCTTGAGAATATTGATAAAAGGCTAATTCTTGGGAGTTAGCCTTTTTTCTAAATGTTGTTTCTATGTGTA ACGAATATTCTGTCAAAAGG
Product: fumarylacetoacetate (FAA) hydrolase
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; 2-Keto-4-Pentenoate Hydratase; Aromatic Amino Acid Degradation Protein; Fumarylacetoacetase; Fumarylacetoacetate Hydrolase Family; Fumarylacetoacetate; Fumarylacetoacetase Protein; Hydrolase; 2-Oxopent-4-Enoate Hydratase; Potential Fumarylacetoacetate Hydrolase
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MKLASYNNGRRDGQLMLVSKDLTKAVAVPAIAHTMQQLMDAWELLNPQLVELYDALNSGMMDNAVDFDESKCLSPLPRAY QWADGSAYVNHVELVRKARGAQMPETFWTDPLVYQGGSDCFIAPKADIPLASEEWGIDFESEIAVITDDVPMGVTVDNAA QHIKLLMLVNDVSLRNLIPGELAKGFGFFQSKPSSSFSPVAVTPDELEGKWQDSKIHLPLITHLNSELFGRPNAGVDMTF NFSQLVSHVAKTRPLGAGAIIGSGTISNYDRSAGSSCLAETRMLETIAEGKPSTPFMGFGDRVRIEMLDDDNNSIFGSID QQVVEYKV
Sequences:
>Translated_328_residues MKLASYNNGRRDGQLMLVSKDLTKAVAVPAIAHTMQQLMDAWELLNPQLVELYDALNSGMMDNAVDFDESKCLSPLPRAY QWADGSAYVNHVELVRKARGAQMPETFWTDPLVYQGGSDCFIAPKADIPLASEEWGIDFESEIAVITDDVPMGVTVDNAA QHIKLLMLVNDVSLRNLIPGELAKGFGFFQSKPSSSFSPVAVTPDELEGKWQDSKIHLPLITHLNSELFGRPNAGVDMTF NFSQLVSHVAKTRPLGAGAIIGSGTISNYDRSAGSSCLAETRMLETIAEGKPSTPFMGFGDRVRIEMLDDDNNSIFGSID QQVVEYKV >Mature_328_residues MKLASYNNGRRDGQLMLVSKDLTKAVAVPAIAHTMQQLMDAWELLNPQLVELYDALNSGMMDNAVDFDESKCLSPLPRAY QWADGSAYVNHVELVRKARGAQMPETFWTDPLVYQGGSDCFIAPKADIPLASEEWGIDFESEIAVITDDVPMGVTVDNAA QHIKLLMLVNDVSLRNLIPGELAKGFGFFQSKPSSSFSPVAVTPDELEGKWQDSKIHLPLITHLNSELFGRPNAGVDMTF NFSQLVSHVAKTRPLGAGAIIGSGTISNYDRSAGSSCLAETRMLETIAEGKPSTPFMGFGDRVRIEMLDDDNNSIFGSID QQVVEYKV
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35922; Mature: 35922
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLASYNNGRRDGQLMLVSKDLTKAVAVPAIAHTMQQLMDAWELLNPQLVELYDALNSGM CCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC MDNAVDFDESKCLSPLPRAYQWADGSAYVNHVELVRKARGAQMPETFWTDPLVYQGGSDC CCCCCCCCHHHHCCCCCHHEECCCCCHHHHHHHHHHHHHCCCCCHHHCCCCEEEECCCCE FIAPKADIPLASEEWGIDFESEIAVITDDVPMGVTVDNAAQHIKLLMLVNDVSLRNLIPG EEECCCCCCCCCHHCCCCCCCCEEEEECCCCCCEEECCHHHHEEEEEEECCCHHHHCCCH ELAKGFGFFQSKPSSSFSPVAVTPDELEGKWQDSKIHLPLITHLNSELFGRPNAGVDMTF HHHHHCCHHCCCCCCCCCCEEECHHHCCCCCCCCEEEEHHHHHCCHHHCCCCCCCEEEEE NFSQLVSHVAKTRPLGAGAIIGSGTISNYDRSAGSSCLAETRMLETIAEGKPSTPFMGFG CHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC DRVRIEMLDDDNNSIFGSIDQQVVEYKV CEEEEEEEECCCCCEECHHHHHHHHHCC >Mature Secondary Structure MKLASYNNGRRDGQLMLVSKDLTKAVAVPAIAHTMQQLMDAWELLNPQLVELYDALNSGM CCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC MDNAVDFDESKCLSPLPRAYQWADGSAYVNHVELVRKARGAQMPETFWTDPLVYQGGSDC CCCCCCCCHHHHCCCCCHHEECCCCCHHHHHHHHHHHHHCCCCCHHHCCCCEEEECCCCE FIAPKADIPLASEEWGIDFESEIAVITDDVPMGVTVDNAAQHIKLLMLVNDVSLRNLIPG EEECCCCCCCCCHHCCCCCCCCEEEEECCCCCCEEECCHHHHEEEEEEECCCHHHHCCCH ELAKGFGFFQSKPSSSFSPVAVTPDELEGKWQDSKIHLPLITHLNSELFGRPNAGVDMTF HHHHHCCHHCCCCCCCCCCEEECHHHCCCCCCCCEEEEHHHHHCCHHHCCCCCCCEEEEE NFSQLVSHVAKTRPLGAGAIIGSGTISNYDRSAGSSCLAETRMLETIAEGKPSTPFMGFG CHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC DRVRIEMLDDDNNSIFGSIDQQVVEYKV CEEEEEEEECCCCCEECHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA